RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 F6X3S4 739 aa6.37□□□□□ -1.39
ATPAF1-212ENST00000542495 GPR37O15354 613 aa6.37□□□□□ -1.39
ATPAF1-212ENST00000542495 ATP8B2P98198 1209 aa6.37□□□□□ -1.39
ATPAF1-212ENST00000542495 SLC26A8Q96RN1 970 aa6.37□□□□□ -1.39
ATPAF1-212ENST00000542495 STAP2Q9UGK3 403 aa6.37□□□□□ -1.39
ATPAF1-212ENST00000542495 EID1Q9Y6B2 187 aa6.37□□□□□ -1.39
ATPAF1-212ENST00000542495 MED1Q15648 1581 aaPredicted RBP6.37□□□□□ -1.39
ATPAF1-212ENST00000542495 NUTM2FA1L443 756 aa6.36□□□□□ -1.39
ATPAF1-212ENST00000542495 GOLGA6L22H0YM25 854 aa6.36□□□□□ -1.39
ATPAF1-212ENST00000542495 DPYSL4O14531 572 aa6.36□□□□□ -1.39
ATPAF1-212ENST00000542495 GNAI3P08754 354 aa6.36□□□□□ -1.39
ATPAF1-212ENST00000542495 ZNF445P59923 1031 aa6.36□□□□□ -1.39
ATPAF1-212ENST00000542495 CCDC30Q5VVM6 783 aa6.36□□□□□ -1.39
ATPAF1-212ENST00000542495 EMILIN3Q9NT22 766 aa6.36□□□□□ -1.39
ATPAF1-212ENST00000542495 MAP3K5Q99683 1374 aa6.36□□□□□ -1.39
ATPAF1-212ENST00000542495 AOX1Q06278 1338 aa6.36□□□□□ -1.39
ATPAF1-212ENST00000542495 GNAT3A8MTJ3 354 aa6.36□□□□□ -1.39
ATPAF1-212ENST00000542495 EPB41L2O43491 1005 aaKnown RBP6.36□□□□□ -1.39
ATPAF1-212ENST00000542495 HOXC9P31274 260 aa6.36□□□□□ -1.39
ATPAF1-212ENST00000542495 AMPHP49418 695 aa6.36□□□□□ -1.39
ATPAF1-212ENST00000542495 FLIIQ13045 1269 aa6.36□□□□□ -1.39
ATPAF1-212ENST00000542495 MKRN3Q13064 507 aaKnown RBP6.36□□□□□ -1.39
ATPAF1-212ENST00000542495 PDIA6Q15084 440 aa6.36□□□□□ -1.39
ATPAF1-212ENST00000542495 NGDNQ8NEJ9 315 aaKnown RBP6.36□□□□□ -1.39
ATPAF1-212ENST00000542495 IL17REQ8NFR9 667 aa6.36□□□□□ -1.39
ATPAF1-212ENST00000542495 PPP1R9BQ96SB3 815 aa6.36□□□□□ -1.39
ATPAF1-212ENST00000542495 STK31Q9BXU1 1019 aa6.36□□□□□ -1.39
ATPAF1-212ENST00000542495 FAM117AQ9C073 453 aa6.36□□□□□ -1.39
ATPAF1-212ENST00000542495 LRRCC1Q9C099 1032 aa6.36□□□□□ -1.39
ATPAF1-212ENST00000542495 GPHNQ9NQX3 736 aaPredicted RBP6.36□□□□□ -1.39
ATPAF1-212ENST00000542495 LMBRD1Q9NUN5 540 aa6.36□□□□□ -1.39
ATPAF1-212ENST00000542495 ZDHHC9Q9Y397 364 aa6.36□□□□□ -1.39
ATPAF1-212ENST00000542495 ANAPC15P60006 121 aa6.35□□□□□ -1.39
ATPAF1-212ENST00000542495 SLC4A10Q6U841 1118 aa6.35□□□□□ -1.39
ATPAF1-212ENST00000542495 ESYT1Q9BSJ8 1104 aa6.35□□□□□ -1.39
ATPAF1-212ENST00000542495 SRCIN1Q9C0H9 1055 aa6.35□□□□□ -1.39
ATPAF1-212ENST00000542495 CEMIPQ8WUJ3 1361 aa6.35□□□□□ -1.39
ATPAF1-212ENST00000542495 PNMA6EA0A0J9YXQ4 647 aa6.34□□□□□ -1.39
ATPAF1-212ENST00000542495 APBB1O00213 710 aa6.34□□□□□ -1.39
ATPAF1-212ENST00000542495 MX1P20591 662 aa6.34□□□□□ -1.39
ATPAF1-212ENST00000542495 CHMLP26374 656 aa6.34□□□□□ -1.39
ATPAF1-212ENST00000542495 MCM2P49736 904 aa6.34□□□□□ -1.39
ATPAF1-212ENST00000542495 CUL4AQ13619 759 aa6.34□□□□□ -1.39
ATPAF1-212ENST00000542495 PKP1Q13835 747 aa6.34□□□□□ -1.39
ATPAF1-212ENST00000542495 TAF7Q15545 349 aaPredicted RBP6.34□□□□□ -1.39
ATPAF1-212ENST00000542495 ZGPATQ8N5A5 531 aaKnown RBP6.34□□□□□ -1.39
ATPAF1-212ENST00000542495 SSH3Q8TE77 659 aa6.34□□□□□ -1.39
ATPAF1-212ENST00000542495 USP44Q9H0E7 712 aa6.34□□□□□ -1.39
ATPAF1-212ENST00000542495 EXOC6BQ9Y2D4 811 aa6.34□□□□□ -1.39
ATPAF1-212ENST00000542495 DDX49Q9Y6V7 483 aaKnown RBP6.34□□□□□ -1.39
ATPAF1-212ENST00000542495 PHRF1Q9P1Y6 1649 aaKnown RBP6.34□□□□□ -1.39
ATPAF1-212ENST00000542495 AK9Q5TCS8 1911 aa6.34□□□□□ -1.39
ATPAF1-212ENST00000542495 KDM3BQ7LBC6 1761 aa6.34□□□□□ -1.4
ATPAF1-212ENST00000542495 NFAT5O94916 1531 aa6.34□□□□□ -1.4
ATPAF1-212ENST00000542495 SPDYE16A6NNV3 312 aaPredicted RBP6.34□□□□□ -1.4
ATPAF1-212ENST00000542495 ESPNB1AK53 854 aa6.34□□□□□ -1.4
ATPAF1-212ENST00000542495 CCDC173Q0VFZ6 552 aa6.34□□□□□ -1.4
ATPAF1-212ENST00000542495 FKBP5Q13451 457 aaPredicted RBP6.34□□□□□ -1.4
ATPAF1-212ENST00000542495 MCTP1Q6DN14 999 aa6.34□□□□□ -1.4
ATPAF1-212ENST00000542495 TMEM106CQ9BVX2 250 aa6.34□□□□□ -1.4
ATPAF1-212ENST00000542495 CRYBG1Q9Y4K1 1723 aa6.33□□□□□ -1.4
ATPAF1-212ENST00000542495 ERBB4Q15303 1308 aa6.33□□□□□ -1.4
ATPAF1-212ENST00000542495 TTLL13PA6NNM8 815 aa6.33□□□□□ -1.4
ATPAF1-212ENST00000542495 RAB11FIP3O75154 756 aa6.33□□□□□ -1.4
ATPAF1-212ENST00000542495 HOXB7P09629 217 aa6.33□□□□□ -1.4
ATPAF1-212ENST00000542495 INTS4Q96HW7 963 aaKnown RBP6.33□□□□□ -1.4
ATPAF1-212ENST00000542495 TMX3Q96JJ7 454 aa6.33□□□□□ -1.4
ATPAF1-212ENST00000542495 LRRFIP2Q9Y608 721 aaKnown RBP6.33□□□□□ -1.4
ATPAF1-212ENST00000542495 LMO7Q8WWI1 1683 aa6.33□□□□□ -1.4
ATPAF1-212ENST00000542495 STRCP1A6NGW2 1772 aa6.33□□□□□ -1.4
ATPAF1-212ENST00000542495 LTN1O94822 1766 aa6.33□□□□□ -1.4
ATPAF1-212ENST00000542495 BRD1O95696 1058 aa6.32□□□□□ -1.4
ATPAF1-212ENST00000542495 KCNA6P17658 529 aa6.32□□□□□ -1.4
ATPAF1-212ENST00000542495 NASPP49321 788 aaPredicted RBP6.32□□□□□ -1.4
ATPAF1-212ENST00000542495 NEK4P51957 841 aa6.32□□□□□ -1.4
ATPAF1-212ENST00000542495 ZSCAN23Q3MJ62 389 aa6.32□□□□□ -1.4
ATPAF1-212ENST00000542495 GPT2Q8TD30 523 aa6.32□□□□□ -1.4
ATPAF1-212ENST00000542495 PALD1Q9ULE6 856 aa6.32□□□□□ -1.4
ATPAF1-212ENST00000542495 NCAPD2Q15021 1401 aa6.32□□□□□ -1.4
ATPAF1-212ENST00000542495 ADGRL3Q9HAR2 1447 aa6.32□□□□□ -1.4
ATPAF1-212ENST00000542495 USP42Q9H9J4 1324 aaKnown RBP6.32□□□□□ -1.4
ATPAF1-212ENST00000542495 UBTFL1P0CB47 393 aaPredicted RBP6.31□□□□□ -1.4
ATPAF1-212ENST00000542495 MCCP23508 829 aa6.31□□□□□ -1.4
ATPAF1-212ENST00000542495 DSG2Q14126 1118 aa6.31□□□□□ -1.4
ATPAF1-212ENST00000542495 TSHZ3Q63HK5 1081 aa6.31□□□□□ -1.4
ATPAF1-212ENST00000542495 UNC5CLQ8IV45 518 aa6.31□□□□□ -1.4
ATPAF1-212ENST00000542495 SLAIN1Q8ND83 568 aa6.31□□□□□ -1.4
ATPAF1-212ENST00000542495 PI4K2BQ8TCG2 481 aa6.31□□□□□ -1.4
ATPAF1-212ENST00000542495 IP6K1Q92551 441 aa6.31□□□□□ -1.4
ATPAF1-212ENST00000542495 CHD2O14647 1828 aaKnown RBP6.31□□□□□ -1.4
ATPAF1-212ENST00000542495 PRPF40AO75400 957 aaKnown RBP6.31□□□□□ -1.4
ATPAF1-212ENST00000542495 HSPA4P34932 840 aa6.31□□□□□ -1.4
ATPAF1-212ENST00000542495 EIF4A1P60842 406 aaKnown RBP6.31□□□□□ -1.4
ATPAF1-212ENST00000542495 HS1BP3Q53T59 392 aa6.31□□□□□ -1.4
ATPAF1-212ENST00000542495 HDGFL1Q5TGJ6 251 aa6.31□□□□□ -1.4
ATPAF1-212ENST00000542495 CAVIN1Q6NZI2 390 aaKnown RBP6.31□□□□□ -1.4
ATPAF1-212ENST00000542495 ABTB2Q8N961 1025 aa6.31□□□□□ -1.4
ATPAF1-212ENST00000542495 PDLIM2Q96JY6 352 aa6.31□□□□□ -1.4
ATPAF1-212ENST00000542495 CHMP4AQ9BY43 222 aa6.31□□□□□ -1.4
ATPAF1-212ENST00000542495 PHAXQ9H814 394 aaKnown RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms