RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 ABCC4O15439 1325 aa19.04■□□□□ 0.64
VARS2-212ENST00000542001 MAP3K11Q16584 847 aa19.04■□□□□ 0.64
VARS2-212ENST00000542001 ZSCAN31Q96LW9 406 aaPredicted RBP19.04■□□□□ 0.64
VARS2-212ENST00000542001 FAM227BQ96M60 508 aa19.04■□□□□ 0.64
VARS2-212ENST00000542001 ABCF2Q9UG63 623 aa19.04■□□□□ 0.64
VARS2-212ENST00000542001 ZFYVE9O95405 1425 aa19.04■□□□□ 0.64
VARS2-212ENST00000542001 ADCY5O95622 1261 aa19.04■□□□□ 0.64
VARS2-212ENST00000542001 BRPF1P55201 1214 aaPredicted RBP19.04■□□□□ 0.64
VARS2-212ENST00000542001 METTL24Q5JXM2 366 aa19.04■□□□□ 0.64
VARS2-212ENST00000542001 CCDC129Q6ZRS4 1044 aa19.04■□□□□ 0.64
VARS2-212ENST00000542001 EVI5LQ96CN4 794 aa19.04■□□□□ 0.64
VARS2-212ENST00000542001 SOS1Q07889 1333 aaPredicted RBP19.03■□□□□ 0.64
VARS2-212ENST00000542001 POLR3DP05423 398 aaPredicted RBP19.03■□□□□ 0.64
VARS2-212ENST00000542001 BICC1Q9H694 974 aaKnown RBP19.03■□□□□ 0.64
VARS2-212ENST00000542001 PPP6R1Q9UPN7 881 aa19.03■□□□□ 0.64
VARS2-212ENST00000542001 EDC4Q6P2E9 1401 aaKnown RBP19.03■□□□□ 0.64
VARS2-212ENST00000542001 GADD45BO75293 160 aaPredicted RBP19.03■□□□□ 0.64
VARS2-212ENST00000542001 ANKRD1Q15327 319 aa19.03■□□□□ 0.64
VARS2-212ENST00000542001 TTC21AQ8NDW8 1320 aa19.03■□□□□ 0.64
VARS2-212ENST00000542001 DHX16O60231 1041 aaKnown RBP19.03■□□□□ 0.64
VARS2-212ENST00000542001 CCDC183Q5T5S1 534 aa19.02■□□□□ 0.64
VARS2-212ENST00000542001 KSR2Q6VAB6 950 aa19.02■□□□□ 0.64
VARS2-212ENST00000542001 PRAMEF22A3QJZ6 481 aa19.02■□□□□ 0.64
VARS2-212ENST00000542001 PDE4CQ08493 712 aa19.02■□□□□ 0.64
VARS2-212ENST00000542001 TBC1D2BQ9UPU7 963 aa19.02■□□□□ 0.64
VARS2-212ENST00000542001 RTL1A6NKG5 1358 aa19.02■□□□□ 0.63
VARS2-212ENST00000542001 ERICH2A1L162 156 aa19.01■□□□□ 0.63
VARS2-212ENST00000542001 ZSCAN22P10073 491 aaPredicted RBP19.01■□□□□ 0.63
VARS2-212ENST00000542001 TIMM10P62072 90 aa19.01■□□□□ 0.63
VARS2-212ENST00000542001 IQSEC3Q9UPP2 1182 aaPredicted RBP19.01■□□□□ 0.63
VARS2-212ENST00000542001 PRDM10Q9NQV6 1147 aa19.01■□□□□ 0.63
VARS2-212ENST00000542001 CLTCL1P53675 1640 aa19.01■□□□□ 0.63
VARS2-212ENST00000542001 HSPA2P54652 639 aa19■□□□□ 0.63
VARS2-212ENST00000542001 SAMD1Q6SPF0 538 aaPredicted RBP19■□□□□ 0.63
VARS2-212ENST00000542001 SYT1P21579 422 aa19■□□□□ 0.63
VARS2-212ENST00000542001 C17orf53Q8N3J3 647 aaPredicted RBP19■□□□□ 0.63
VARS2-212ENST00000542001 MPHOSPH8Q99549 860 aa19■□□□□ 0.63
VARS2-212ENST00000542001 SAFBQ15424 915 aaKnown RBP eCLIP19■□□□□ 0.63
VARS2-212ENST00000542001 SLC4A8Q2Y0W8 1093 aa19■□□□□ 0.63
VARS2-212ENST00000542001 LRSAM1Q6UWE0 723 aa19■□□□□ 0.63
VARS2-212ENST00000542001 SYNMO15061 1565 aa19■□□□□ 0.63
VARS2-212ENST00000542001 MAP3K5Q99683 1374 aa18.99■□□□□ 0.63
VARS2-212ENST00000542001 CHD1O14646 1710 aa18.99■□□□□ 0.63
VARS2-212ENST00000542001 IFNL2Q8IZJ0 200 aa18.99■□□□□ 0.63
VARS2-212ENST00000542001 LETM1O95202 739 aaPredicted RBP18.99■□□□□ 0.63
VARS2-212ENST00000542001 VPS53Q5VIR6 699 aa18.99■□□□□ 0.63
VARS2-212ENST00000542001 TRMT1Q9NXH9 659 aaKnown RBP18.99■□□□□ 0.63
VARS2-212ENST00000542001 ADAMTS2O95450 1211 aa18.98■□□□□ 0.63
VARS2-212ENST00000542001 HSP90AA4PQ58FG1 418 aa18.98■□□□□ 0.63
VARS2-212ENST00000542001 AKAP4Q5JQC9 854 aa18.98■□□□□ 0.63
VARS2-212ENST00000542001 CLCN1P35523 988 aa18.98■□□□□ 0.63
VARS2-212ENST00000542001 CDC42BPBQ9Y5S2 1711 aa18.98■□□□□ 0.63
VARS2-212ENST00000542001 PROSER3Q2NL68 480 aa18.98■□□□□ 0.63
VARS2-212ENST00000542001 NEK1Q96PY6 1258 aa18.98■□□□□ 0.63
VARS2-212ENST00000542001 TMEM63CQ9P1W3 806 aa18.98■□□□□ 0.63
VARS2-212ENST00000542001 MARCH6O60337 910 aa18.97■□□□□ 0.63
VARS2-212ENST00000542001 TFCP2Q12800 502 aa18.97■□□□□ 0.63
VARS2-212ENST00000542001 HELBQ8NG08 1087 aaPredicted RBP18.97■□□□□ 0.63
VARS2-212ENST00000542001 C16orf45Q96MC5 204 aaPredicted RBP18.97■□□□□ 0.63
VARS2-212ENST00000542001 ADCY10Q96PN6 1610 aa18.97■□□□□ 0.63
VARS2-212ENST00000542001 CLSTN1O94985 981 aa18.97■□□□□ 0.63
VARS2-212ENST00000542001 DACT1Q9NYF0 836 aa18.97■□□□□ 0.63
VARS2-212ENST00000542001 ZCCHC11Q5TAX3 1644 aaKnown RBP18.97■□□□□ 0.63
VARS2-212ENST00000542001 LINS1Q8NG48 757 aa18.97■□□□□ 0.63
VARS2-212ENST00000542001 CCDC34Q96HJ3 373 aa18.97■□□□□ 0.63
VARS2-212ENST00000542001 TPM2P07951 284 aa18.96■□□□□ 0.63
VARS2-212ENST00000542001 MINDY4BA8MYZ0 360 aa18.96■□□□□ 0.63
VARS2-212ENST00000542001 RNMTO43148 476 aaKnown RBP18.96■□□□□ 0.63
VARS2-212ENST00000542001 ZBTB9Q96C00 473 aa18.96■□□□□ 0.63
VARS2-212ENST00000542001 PHF23Q9BUL5 403 aaPredicted RBP18.96■□□□□ 0.63
VARS2-212ENST00000542001 SH2B1Q9NRF2 756 aaPredicted RBP18.96■□□□□ 0.63
VARS2-212ENST00000542001 ZFYVE16Q7Z3T8 1539 aa18.96■□□□□ 0.63
VARS2-212ENST00000542001 G3V3G9 751 aa18.96■□□□□ 0.63
VARS2-212ENST00000542001 SNRPA1P09661 255 aaKnown RBP18.96■□□□□ 0.63
VARS2-212ENST00000542001 DCAF8Q5TAQ9 597 aa18.96■□□□□ 0.63
VARS2-212ENST00000542001 ZNF396Q96N95 335 aaPredicted RBP18.96■□□□□ 0.63
VARS2-212ENST00000542001 LMBRD1Q9NUN5 540 aa18.96■□□□□ 0.63
VARS2-212ENST00000542001 IP6K1Q92551 441 aa18.95■□□□□ 0.62
VARS2-212ENST00000542001 ZNF594Q96JF6 807 aaPredicted RBP18.95■□□□□ 0.62
VARS2-212ENST00000542001 KRT32Q14532 448 aa18.95■□□□□ 0.62
VARS2-212ENST00000542001 CREB3L3Q68CJ9 461 aa18.95■□□□□ 0.62
VARS2-212ENST00000542001 LDHAL6AQ6ZMR3 332 aa18.95■□□□□ 0.62
VARS2-212ENST00000542001 TMOD3Q9NYL9 352 aa18.95■□□□□ 0.62
VARS2-212ENST00000542001 ROBO2Q9HCK4 1378 aa18.95■□□□□ 0.62
VARS2-212ENST00000542001 TDO2P48775 406 aa18.95■□□□□ 0.62
VARS2-212ENST00000542001 SUCLG2Q96I99 432 aa18.95■□□□□ 0.62
VARS2-212ENST00000542001 TRMT112Q9UI30 125 aaKnown RBP18.95■□□□□ 0.62
VARS2-212ENST00000542001 SNX14Q9Y5W7 946 aa18.95■□□□□ 0.62
VARS2-212ENST00000542001 F13A1P00488 732 aa18.94■□□□□ 0.62
VARS2-212ENST00000542001 RXRAP19793 462 aa18.94■□□□□ 0.62
VARS2-212ENST00000542001 Q6ZUG5 572 aa18.94■□□□□ 0.62
VARS2-212ENST00000542001 CFAP45Q9UL16 551 aa18.94■□□□□ 0.62
VARS2-212ENST00000542001 SERPINC1P01008 464 aa18.94■□□□□ 0.62
VARS2-212ENST00000542001 UBE2HP62256 183 aa18.94■□□□□ 0.62
VARS2-212ENST00000542001 IFIT5Q13325 482 aaKnown RBP18.94■□□□□ 0.62
VARS2-212ENST00000542001 MICU3Q86XE3 530 aa18.94■□□□□ 0.62
VARS2-212ENST00000542001 DBNDD2Q9BQY9 259 aa18.94■□□□□ 0.62
VARS2-212ENST00000542001 U3KPZ7 1027 aaPredicted RBP18.94■□□□□ 0.62
VARS2-212ENST00000542001 ZNF771Q7L3S4 317 aaPredicted RBP18.94■□□□□ 0.62
VARS2-212ENST00000542001 PCMTD1Q96MG8 357 aaPredicted RBP18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms