RNA–Protein interactions for RNA: ENST00000535810.1

CHD4-204, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-204ENST00000535810 A0A0G2JLW4 131 aa11.66□□□□□ -0.54
CHD4-204ENST00000535810 TOMM70O94826 608 aa11.66□□□□□ -0.54
CHD4-204ENST00000535810 DPEP1P16444 411 aa11.66□□□□□ -0.54
CHD4-204ENST00000535810 PIP4K2AP48426 406 aaPredicted RBP11.66□□□□□ -0.54
CHD4-204ENST00000535810 CCDC146Q8IYE0 955 aa11.66□□□□□ -0.54
CHD4-204ENST00000535810 PNISRQ8TF01 805 aaKnown RBP11.66□□□□□ -0.54
CHD4-204ENST00000535810 TBC1D2BQ9UPU7 963 aa11.66□□□□□ -0.54
CHD4-204ENST00000535810 NRXN2Q9P2S2 1712 aa11.66□□□□□ -0.54
CHD4-204ENST00000535810 LAMB4A4D0S4 1761 aa11.65□□□□□ -0.54
CHD4-204ENST00000535810 TMPOP42166 694 aaKnown RBP11.65□□□□□ -0.54
CHD4-204ENST00000535810 RIPK4P57078 832 aa11.65□□□□□ -0.54
CHD4-204ENST00000535810 WDR43Q15061 677 aaKnown RBP eCLIP11.65□□□□□ -0.54
CHD4-204ENST00000535810 TNS4Q8IZW8 715 aa11.65□□□□□ -0.54
CHD4-204ENST00000535810 JMYQ8N9B5 988 aa11.65□□□□□ -0.54
CHD4-204ENST00000535810 BRCA1P38398 1863 aaKnown RBP11.65□□□□□ -0.54
CHD4-204ENST00000535810 AFDNP55196 1824 aaKnown RBP11.65□□□□□ -0.55
CHD4-204ENST00000535810 NBPF26B4DH59 902 aa11.64□□□□□ -0.55
CHD4-204ENST00000535810 CAMTA2O94983 1202 aa11.64□□□□□ -0.55
CHD4-204ENST00000535810 PRR29P0C7W0 189 aa11.64□□□□□ -0.55
CHD4-204ENST00000535810 KCNA3P22001 575 aa11.64□□□□□ -0.55
CHD4-204ENST00000535810 EIF4A1P60842 406 aaKnown RBP11.64□□□□□ -0.55
CHD4-204ENST00000535810 LMOD3Q0VAK6 560 aa11.64□□□□□ -0.55
CHD4-204ENST00000535810 TBC1D9BQ66K14 1250 aa11.64□□□□□ -0.55
CHD4-204ENST00000535810 NBPF10Q6P3W6 841 aaKnown RBP11.64□□□□□ -0.55
CHD4-204ENST00000535810 NBPF15Q8N660 670 aa11.64□□□□□ -0.55
CHD4-204ENST00000535810 ADAMTS8Q9UP79 889 aa11.64□□□□□ -0.55
CHD4-204ENST00000535810 RRP7AQ9Y3A4 280 aaKnown RBP11.64□□□□□ -0.55
CHD4-204ENST00000535810 BCORQ6W2J9 1755 aa11.64□□□□□ -0.55
CHD4-204ENST00000535810 SERPINB2P05120 415 aa11.63□□□□□ -0.55
CHD4-204ENST00000535810 BICDL1Q6ZP65 573 aa11.63□□□□□ -0.55
CHD4-204ENST00000535810 NPM2Q86SE8 214 aaKnown RBP11.63□□□□□ -0.55
CHD4-204ENST00000535810 DZIP3Q86Y13 1208 aaKnown RBP11.63□□□□□ -0.55
CHD4-204ENST00000535810 RUNDC1Q96C34 613 aa11.63□□□□□ -0.55
CHD4-204ENST00000535810 BCS1LQ9Y276 419 aa11.63□□□□□ -0.55
CHD4-204ENST00000535810 CARMIL3Q8ND23 1372 aa11.63□□□□□ -0.55
CHD4-204ENST00000535810 CHRNA5P30532 468 aa11.62□□□□□ -0.55
CHD4-204ENST00000535810 KLRG1Q96E93 195 aa11.62□□□□□ -0.55
CHD4-204ENST00000535810 TSPYL4Q9UJ04 414 aa11.62□□□□□ -0.55
CHD4-204ENST00000535810 ZNF316A6NFI3 1004 aaPredicted RBP11.61□□□□□ -0.55
CHD4-204ENST00000535810 PITPNM1O00562 1244 aa11.61□□□□□ -0.55
CHD4-204ENST00000535810 NEUROD2Q15784 382 aa11.61□□□□□ -0.55
CHD4-204ENST00000535810 BABAM1Q9NWV8 329 aa11.61□□□□□ -0.55
CHD4-204ENST00000535810 PIM2Q9P1W9 311 aa11.61□□□□□ -0.55
CHD4-204ENST00000535810 TRIM35Q9UPQ4 493 aa11.61□□□□□ -0.55
CHD4-204ENST00000535810 RGL2O15211 777 aa11.6□□□□□ -0.55
CHD4-204ENST00000535810 SLC34A2O95436 690 aa11.6□□□□□ -0.55
CHD4-204ENST00000535810 DALRD3Q5D0E6 543 aaKnown RBP11.6□□□□□ -0.55
CHD4-204ENST00000535810 PRR5LQ6MZQ0 368 aa11.6□□□□□ -0.55
CHD4-204ENST00000535810 ARFGEF1Q9Y6D6 1849 aa11.6□□□□□ -0.55
CHD4-204ENST00000535810 DLEC1Q9Y238 1755 aa11.59□□□□□ -0.55
CHD4-204ENST00000535810 CLEC4GQ6UXB4 293 aa11.59□□□□□ -0.55
CHD4-204ENST00000535810 SETDB2Q96T68 719 aa11.59□□□□□ -0.55
CHD4-204ENST00000535810 ZBTB47Q9UFB7 747 aaPredicted RBP11.59□□□□□ -0.55
CHD4-204ENST00000535810 ZNF652Q9Y2D9 606 aa11.59□□□□□ -0.55
CHD4-204ENST00000535810 ANKRD31Q8N7Z5 1873 aa11.58□□□□□ -0.56
CHD4-204ENST00000535810 CHL1O00533 1208 aa11.58□□□□□ -0.56
CHD4-204ENST00000535810 CCDC184Q52MB2 194 aa11.58□□□□□ -0.56
CHD4-204ENST00000535810 CNBD1Q8NA66 436 aa11.58□□□□□ -0.56
CHD4-204ENST00000535810 RBM46Q8TBY0 533 aaKnown RBP11.58□□□□□ -0.56
CHD4-204ENST00000535810 ERBB4Q15303 1308 aa11.58□□□□□ -0.56
CHD4-204ENST00000535810 HLFQ16534 295 aa11.57□□□□□ -0.56
CHD4-204ENST00000535810 ARHGAP27Q6ZUM4 889 aa11.57□□□□□ -0.56
CHD4-204ENST00000535810 C2CD5Q86YS7 1000 aa11.57□□□□□ -0.56
CHD4-204ENST00000535810 CCDC24Q8N4L8 307 aa11.57□□□□□ -0.56
CHD4-204ENST00000535810 BRIP1Q9BX63 1249 aa11.57□□□□□ -0.56
CHD4-204ENST00000535810 COL11A2P13942 1736 aaPredicted RBP11.57□□□□□ -0.56
CHD4-204ENST00000535810 H0YIN7 160 aa11.56□□□□□ -0.56
CHD4-204ENST00000535810 APAF1O14727 1248 aa11.56□□□□□ -0.56
CHD4-204ENST00000535810 MYL6BP14649 208 aa11.56□□□□□ -0.56
CHD4-204ENST00000535810 PDE6BP35913 854 aa11.56□□□□□ -0.56
CHD4-204ENST00000535810 FSTL1Q12841 308 aa11.56□□□□□ -0.56
CHD4-204ENST00000535810 LRP10Q7Z4F1 713 aa11.56□□□□□ -0.56
CHD4-204ENST00000535810 NBPF5PQ86XG9 351 aaPredicted RBP11.56□□□□□ -0.56
CHD4-204ENST00000535810 NGEFQ8N5V2 710 aa11.56□□□□□ -0.56
CHD4-204ENST00000535810 CREBZFQ9NS37 354 aa11.56□□□□□ -0.56
CHD4-204ENST00000535810 NIP7Q9Y221 180 aaKnown RBP eCLIP11.56□□□□□ -0.56
CHD4-204ENST00000535810 MAP3K15Q6ZN16 1313 aa11.56□□□□□ -0.56
CHD4-204ENST00000535810 ERVV-1B6SEH8 477 aa11.55□□□□□ -0.56
CHD4-204ENST00000535810 NPHP1O15259 732 aa11.55□□□□□ -0.56
CHD4-204ENST00000535810 ECM2O94769 699 aaPredicted RBP11.55□□□□□ -0.56
CHD4-204ENST00000535810 ST5P78524 1137 aa11.55□□□□□ -0.56
CHD4-204ENST00000535810 PDIA6Q15084 440 aa11.55□□□□□ -0.56
CHD4-204ENST00000535810 KRT24Q2M2I5 525 aa11.55□□□□□ -0.56
CHD4-204ENST00000535810 PROSER3Q2NL68 480 aa11.55□□□□□ -0.56
CHD4-204ENST00000535810 KIF6Q6ZMV9 814 aa11.55□□□□□ -0.56
CHD4-204ENST00000535810 TTLL7Q6ZT98 887 aa11.55□□□□□ -0.56
CHD4-204ENST00000535810 TTLL6Q8N841 843 aa11.55□□□□□ -0.56
CHD4-204ENST00000535810 CIZ1Q9ULV3 898 aaPredicted RBP11.55□□□□□ -0.56
CHD4-204ENST00000535810 PDZRN3Q9UPQ7 1066 aa11.55□□□□□ -0.56
CHD4-204ENST00000535810 LAS1LQ9Y4W2 734 aaKnown RBP11.55□□□□□ -0.56
CHD4-204ENST00000535810 EIF2S2P20042 333 aaKnown RBP11.54□□□□□ -0.56
CHD4-204ENST00000535810 CFAP44Q96MT7 982 aa11.54□□□□□ -0.56
CHD4-204ENST00000535810 ANP32CO43423 234 aa11.53□□□□□ -0.56
CHD4-204ENST00000535810 ANXA1P04083 346 aa11.53□□□□□ -0.56
CHD4-204ENST00000535810 SRGNP10124 158 aa11.53□□□□□ -0.56
CHD4-204ENST00000535810 HTRA3P83110 453 aa11.53□□□□□ -0.56
CHD4-204ENST00000535810 ZBTB3Q9H5J0 574 aa11.53□□□□□ -0.56
CHD4-204ENST00000535810 NMRK2Q9NPI5 230 aa11.53□□□□□ -0.56
CHD4-204ENST00000535810 MBIPQ9NS73 344 aa11.53□□□□□ -0.56
CHD4-204ENST00000535810 PCDH10Q9P2E7 1040 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms