RNA–Protein interactions for RNA: ENST00000535038.1

TNFRSF1A-206, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 578 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-206ENST00000535038 USP3Q9Y6I4 520 aa8.79□□□□□ -1
TNFRSF1A-206ENST00000535038 DHX57Q6P158 1386 aaKnown RBP8.78□□□□□ -1
TNFRSF1A-206ENST00000535038 PIK3R2O00459 728 aa8.78□□□□□ -1
TNFRSF1A-206ENST00000535038 BACH1O14867 736 aa8.78□□□□□ -1
TNFRSF1A-206ENST00000535038 MAPTP10636 758 aaKnown RBP8.78□□□□□ -1
TNFRSF1A-206ENST00000535038 WWC1Q8IX03 1113 aa8.78□□□□□ -1
TNFRSF1A-206ENST00000535038 GJA3Q9Y6H8 435 aa8.78□□□□□ -1
TNFRSF1A-206ENST00000535038 EFCAB5A4FU69 1503 aa8.78□□□□□ -1
TNFRSF1A-206ENST00000535038 AQRO60306 1485 aaKnown RBP eCLIP8.77□□□□□ -12e-12■■■■□ 26.1
TNFRSF1A-206ENST00000535038 ABCA5Q8WWZ7 1642 aa8.77□□□□□ -1.01
TNFRSF1A-206ENST00000535038 KRBA1A5PL33 1030 aa8.77□□□□□ -1.01
TNFRSF1A-206ENST00000535038 KHNYNO15037 678 aaKnown RBP8.77□□□□□ -1.01
TNFRSF1A-206ENST00000535038 LZTS3O60299 673 aaPredicted RBP8.77□□□□□ -1.01
TNFRSF1A-206ENST00000535038 HOXB4P17483 251 aaPredicted RBP8.77□□□□□ -1.01
TNFRSF1A-206ENST00000535038 COL8A1P27658 744 aa8.77□□□□□ -1.01
TNFRSF1A-206ENST00000535038 GTF2IP78347 998 aa8.77□□□□□ -1.01
TNFRSF1A-206ENST00000535038 TNP2Q05952 138 aa8.77□□□□□ -1.01
TNFRSF1A-206ENST00000535038 PSME1Q06323 249 aa8.77□□□□□ -1.01
TNFRSF1A-206ENST00000535038 GRIN2CQ14957 1233 aa8.77□□□□□ -1.01
TNFRSF1A-206ENST00000535038 BTBD6Q96KE9 485 aa8.77□□□□□ -1.01
TNFRSF1A-206ENST00000535038 ALG2Q9H553 416 aa8.77□□□□□ -1.01
TNFRSF1A-206ENST00000535038 CTTNBP2Q8WZ74 1663 aa8.77□□□□□ -1.01
TNFRSF1A-206ENST00000535038 NESP48681 1621 aa8.76□□□□□ -1.01
TNFRSF1A-206ENST00000535038 URB2Q14146 1524 aaKnown RBP8.76□□□□□ -1.01
TNFRSF1A-206ENST00000535038 GNB5O14775 395 aa8.76□□□□□ -1.01
TNFRSF1A-206ENST00000535038 CD33P20138 364 aa8.76□□□□□ -1.01
TNFRSF1A-206ENST00000535038 ADH6P28332 368 aa8.76□□□□□ -1.01
TNFRSF1A-206ENST00000535038 FAM182BQ5T319 152 aa8.76□□□□□ -1.01
TNFRSF1A-206ENST00000535038 LINC00114Q6XXX2 140 aa8.76□□□□□ -1.01
TNFRSF1A-206ENST00000535038 NFATC2IPQ8NCF5 419 aa8.76□□□□□ -1.01
TNFRSF1A-206ENST00000535038 ZIC5Q96T25 663 aa8.76□□□□□ -1.01
TNFRSF1A-206ENST00000535038 RAD54L2Q9Y4B4 1467 aa8.76□□□□□ -1.01
TNFRSF1A-206ENST00000535038 PCF11O94913 1555 aaKnown RBP8.75□□□□□ -1.01
TNFRSF1A-206ENST00000535038 ADAM23O75077 832 aa8.75□□□□□ -1.01
TNFRSF1A-206ENST00000535038 NCOA4Q13772 614 aa8.75□□□□□ -1.01
TNFRSF1A-206ENST00000535038 DIEXFQ68CQ4 756 aaKnown RBP8.75□□□□□ -1.01
TNFRSF1A-206ENST00000535038 BICDL1Q6ZP65 573 aa8.75□□□□□ -1.01
TNFRSF1A-206ENST00000535038 AVENQ9NQS1 362 aaPredicted RBP8.75□□□□□ -1.01
TNFRSF1A-206ENST00000535038 PARP3Q9Y6F1 533 aa8.75□□□□□ -1.01
TNFRSF1A-206ENST00000535038 LRRC9Q6ZRR7 1453 aa8.75□□□□□ -1.01
TNFRSF1A-206ENST00000535038 CCNB3Q8WWL7 1395 aa8.74□□□□□ -1.01
TNFRSF1A-206ENST00000535038 FAM157BP0CG42 384 aa8.74□□□□□ -1.01
TNFRSF1A-206ENST00000535038 DGKGP49619 791 aa8.74□□□□□ -1.01
TNFRSF1A-206ENST00000535038 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.74□□□□□ -1.01
TNFRSF1A-206ENST00000535038 SUV39H2Q9H5I1 410 aa8.74□□□□□ -1.01
TNFRSF1A-206ENST00000535038 SCHIP1Q9P0W5 487 aaPredicted RBP8.74□□□□□ -1.01
TNFRSF1A-206ENST00000535038 HCN2Q9UL51 889 aa8.74□□□□□ -1.01
TNFRSF1A-206ENST00000535038 SAMD9Q5K651 1589 aa8.73□□□□□ -1.01
TNFRSF1A-206ENST00000535038 FHAD1B1AJZ9 1412 aa8.73□□□□□ -1.01
TNFRSF1A-206ENST00000535038 SAMD5Q5TGI4 173 aa8.73□□□□□ -1.01
TNFRSF1A-206ENST00000535038 CHSY3Q70JA7 882 aa8.73□□□□□ -1.01
TNFRSF1A-206ENST00000535038 POM121Q96HA1 1249 aa8.73□□□□□ -1.01
TNFRSF1A-206ENST00000535038 ZNF358Q9NW07 568 aa8.73□□□□□ -1.01
TNFRSF1A-206ENST00000535038 FYCO1Q9BQS8 1478 aa8.72□□□□□ -1.01
TNFRSF1A-206ENST00000535038 USP17L5A8MUK1 530 aa8.72□□□□□ -1.01
TNFRSF1A-206ENST00000535038 RAD21O60216 631 aa8.72□□□□□ -1.01
TNFRSF1A-206ENST00000535038 TXLNAP40222 546 aa8.72□□□□□ -1.01
TNFRSF1A-206ENST00000535038 DEPDC4Q8N2C3 294 aa8.72□□□□□ -1.01
TNFRSF1A-206ENST00000535038 NOP53Q9NZM5 478 aaKnown RBP8.72□□□□□ -1.01
TNFRSF1A-206ENST00000535038 KLF15Q9UIH9 416 aa8.72□□□□□ -1.01
TNFRSF1A-206ENST00000535038 PRR12Q9ULL5 1215 aa8.72□□□□□ -1.01
TNFRSF1A-206ENST00000535038 CASKIN1Q8WXD9 1431 aa8.71□□□□□ -1.01
TNFRSF1A-206ENST00000535038 BAG6P46379 1132 aa8.71□□□□□ -1.02
TNFRSF1A-206ENST00000535038 ZNF468Q5VIY5 522 aaPredicted RBP8.71□□□□□ -1.02
TNFRSF1A-206ENST00000535038 FCHSD1Q86WN1 690 aa8.71□□□□□ -1.02
TNFRSF1A-206ENST00000535038 ZDHHC1Q8WTX9 485 aa8.71□□□□□ -1.02
TNFRSF1A-206ENST00000535038 L3MBTL2Q969R5 705 aa8.71□□□□□ -1.02
TNFRSF1A-206ENST00000535038 MARK1Q9P0L2 795 aa8.71□□□□□ -1.02
TNFRSF1A-206ENST00000535038 TARBP1Q13395 1621 aaKnown RBP8.71□□□□□ -1.02
TNFRSF1A-206ENST00000535038 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.71□□□□□ -1.02
TNFRSF1A-206ENST00000535038 SNAPC4Q5SXM2 1469 aa8.7□□□□□ -1.02
TNFRSF1A-206ENST00000535038 PCBP4P57723 403 aaKnown RBP8.7□□□□□ -1.02
TNFRSF1A-206ENST00000535038 LAMC2Q13753 1193 aa8.7□□□□□ -1.02
TNFRSF1A-206ENST00000535038 TEAD4Q15561 434 aa8.7□□□□□ -1.02
TNFRSF1A-206ENST00000535038 MAPKBP1O60336 1514 aa8.7□□□□□ -1.02
TNFRSF1A-206ENST00000535038 KIF21AQ7Z4S6 1674 aa8.69□□□□□ -1.02
TNFRSF1A-206ENST00000535038 EFSO43281 561 aa8.69□□□□□ -1.02
TNFRSF1A-206ENST00000535038 NOS2P35228 1153 aa8.69□□□□□ -1.02
TNFRSF1A-206ENST00000535038 RANGAP1P46060 587 aaPredicted RBP8.69□□□□□ -1.02
TNFRSF1A-206ENST00000535038 EPHA4P54764 986 aa8.69□□□□□ -1.02
TNFRSF1A-206ENST00000535038 TRIM50Q86XT4 487 aa8.69□□□□□ -1.02
TNFRSF1A-206ENST00000535038 SLC9A9Q8IVB4 645 aa8.69□□□□□ -1.02
TNFRSF1A-206ENST00000535038 STRN4Q9NRL3 753 aa8.69□□□□□ -1.02
TNFRSF1A-206ENST00000535038 ZNF232Q9UNY5 417 aa8.69□□□□□ -1.02
TNFRSF1A-206ENST00000535038 ACIN1Q9UKV3 1341 aaKnown RBP8.69□□□□□ -1.02
TNFRSF1A-206ENST00000535038 PHLDB1Q86UU1 1377 aa8.69□□□□□ -1.02
TNFRSF1A-206ENST00000535038 K7ELQ4 463 aaPredicted RBP8.68□□□□□ -1.02
TNFRSF1A-206ENST00000535038 PRKCSHP14314 528 aaPredicted RBP8.68□□□□□ -1.02
TNFRSF1A-206ENST00000535038 TNS4Q8IZW8 715 aa8.68□□□□□ -1.02
TNFRSF1A-206ENST00000535038 NEUROD4Q9HD90 331 aa8.68□□□□□ -1.02
TNFRSF1A-206ENST00000535038 THOC2Q8NI27 1593 aaKnown RBP8.68□□□□□ -1.02
TNFRSF1A-206ENST00000535038 LRRIQ1Q96JM4 1722 aa8.68□□□□□ -1.02
TNFRSF1A-206ENST00000535038 EML1O00423 815 aa8.67□□□□□ -1.02
TNFRSF1A-206ENST00000535038 TBCELQ5QJ74 424 aa8.67□□□□□ -1.02
TNFRSF1A-206ENST00000535038 LRRC69Q6ZNQ3 347 aa8.67□□□□□ -1.02
TNFRSF1A-206ENST00000535038 PDS5BQ9NTI5 1447 aa8.67□□□□□ -1.02
TNFRSF1A-206ENST00000535038 GPC6Q9Y625 555 aaPredicted RBP8.67□□□□□ -1.02
TNFRSF1A-206ENST00000535038 GRIN2BQ13224 1484 aa8.66□□□□□ -1.02
TNFRSF1A-206ENST00000535038 FHOD3Q2V2M9 1422 aa8.66□□□□□ -1.02
TNFRSF1A-206ENST00000535038 SERTM1A2A2V5 107 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 142.1 ms