RNA–Protein interactions for RNA: ENST00000530875.5

NXF1-207, Transcript of nuclear RNA export factor 1, humanhuman

TSL 1 (best)

Gene NXF1, Length 1,922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-207ENST00000530875 SLC27A3Q5K4L6 730 aa17.6■□□□□ 0.41
NXF1-207ENST00000530875 ZBTB40Q9NUA8 1239 aa17.6■□□□□ 0.41
NXF1-207ENST00000530875 ATP10DQ9P241 1426 aa17.59■□□□□ 0.41
NXF1-207ENST00000530875 PLSCR1O15162 318 aa17.59■□□□□ 0.41
NXF1-207ENST00000530875 KIF6Q6ZMV9 814 aa17.59■□□□□ 0.41
NXF1-207ENST00000530875 NPM2Q86SE8 214 aaKnown RBP17.59■□□□□ 0.41
NXF1-207ENST00000530875 METTL22Q9BUU2 404 aaPredicted RBP17.59■□□□□ 0.41
NXF1-207ENST00000530875 MYH14Q7Z406 1995 aaKnown RBP17.59■□□□□ 0.41
NXF1-207ENST00000530875 AAMPQ13685 434 aa17.59■□□□□ 0.41
NXF1-207ENST00000530875 TXNRD1Q16881 649 aa17.59■□□□□ 0.41
NXF1-207ENST00000530875 RC3H1Q5TC82 1133 aaKnown RBP17.59■□□□□ 0.41
NXF1-207ENST00000530875 PROM2Q8N271 834 aa17.59■□□□□ 0.41
NXF1-207ENST00000530875 MYD88Q99836 296 aa17.59■□□□□ 0.41
NXF1-207ENST00000530875 TNS1Q9HBL0 1735 aaKnown RBP17.58■□□□□ 0.41
NXF1-207ENST00000530875 CWF19L2Q2TBE0 894 aaKnown RBP17.58■□□□□ 0.4
NXF1-207ENST00000530875 CCDC136Q96JN2 1154 aa17.58■□□□□ 0.4
NXF1-207ENST00000530875 MEIS3Q99687 375 aa17.58■□□□□ 0.4
NXF1-207ENST00000530875 CHMP4BQ9H444 224 aaKnown RBP17.58■□□□□ 0.4
NXF1-207ENST00000530875 TBC1D2BQ9UPU7 963 aa17.58■□□□□ 0.4
NXF1-207ENST00000530875 NEXNQ0ZGT2 675 aa17.57■□□□□ 0.4
NXF1-207ENST00000530875 DZIP3Q86Y13 1208 aaKnown RBP17.57■□□□□ 0.4
NXF1-207ENST00000530875 LINS1Q8NG48 757 aa17.57■□□□□ 0.4
NXF1-207ENST00000530875 N4BP2Q86UW6 1770 aaPredicted RBP17.57■□□□□ 0.4
NXF1-207ENST00000530875 ARFGEF2Q9Y6D5 1785 aa17.57■□□□□ 0.4
NXF1-207ENST00000530875 GNPATO15228 680 aa17.57■□□□□ 0.4
NXF1-207ENST00000530875 IGKV5-2P06315 115 aa17.57■□□□□ 0.4
NXF1-207ENST00000530875 MAP3K15Q6ZN16 1313 aa17.57■□□□□ 0.4
NXF1-207ENST00000530875 TAF1LQ8IZX4 1826 aa17.57■□□□□ 0.4
NXF1-207ENST00000530875 C1orf115Q9H7X2 142 aa17.57■□□□□ 0.4
NXF1-207ENST00000530875 COL15A1P39059 1388 aa17.56■□□□□ 0.4
NXF1-207ENST00000530875 SMIM5Q71RC9 77 aa17.56■□□□□ 0.4
NXF1-207ENST00000530875 RBM19Q9Y4C8 960 aaKnown RBP17.56■□□□□ 0.4
NXF1-207ENST00000530875 PCDHB15Q9Y5E8 787 aa17.56■□□□□ 0.4
NXF1-207ENST00000530875 C4BP0C0L5 1744 aa17.56■□□□□ 0.4
NXF1-207ENST00000530875 NUP188Q5SRE5 1749 aa17.56■□□□□ 0.4
NXF1-207ENST00000530875 ATP5J2-PTCD1G3V325 749 aa17.55■□□□□ 0.4
NXF1-207ENST00000530875 ALDH1L1O75891 902 aa17.55■□□□□ 0.4
NXF1-207ENST00000530875 USP44Q9H0E7 712 aa17.55■□□□□ 0.4
NXF1-207ENST00000530875 NEURL1BA8MQ27 555 aa17.55■□□□□ 0.4
NXF1-207ENST00000530875 RPS6KA4O75676 772 aa17.55■□□□□ 0.4
NXF1-207ENST00000530875 HLFQ16534 295 aa17.55■□□□□ 0.4
NXF1-207ENST00000530875 AK7Q96M32 723 aa17.55■□□□□ 0.4
NXF1-207ENST00000530875 RTCBQ9Y3I0 505 aaKnown RBP17.54■□□□□ 0.4
NXF1-207ENST00000530875 AMIGO3Q86WK7 504 aa17.53■□□□□ 0.4
NXF1-207ENST00000530875 A0A087WZG4 1122 aa17.53■□□□□ 0.4
NXF1-207ENST00000530875 ERVV-1B6SEH8 477 aa17.53■□□□□ 0.4
NXF1-207ENST00000530875 GIGYF2Q6Y7W6 1299 aaKnown RBP17.53■□□□□ 0.4
NXF1-207ENST00000530875 CAMTA2O94983 1202 aa17.52■□□□□ 0.4
NXF1-207ENST00000530875 GNAI3P08754 354 aa17.52■□□□□ 0.4
NXF1-207ENST00000530875 NBPF7P0C2Y1 421 aaPredicted RBP17.52■□□□□ 0.4
NXF1-207ENST00000530875 EN1Q05925 392 aaPredicted RBP17.52■□□□□ 0.4
NXF1-207ENST00000530875 TCIRG1Q13488 830 aa17.52■□□□□ 0.4
NXF1-207ENST00000530875 C9orf78Q9NZ63 289 aaPredicted RBP17.52■□□□□ 0.4
NXF1-207ENST00000530875 PHF14O94880 888 aa17.51■□□□□ 0.39
NXF1-207ENST00000530875 UBTFL1P0CB47 393 aaPredicted RBP17.51■□□□□ 0.39
NXF1-207ENST00000530875 SF3B2Q13435 895 aaKnown RBP17.51■□□□□ 0.39
NXF1-207ENST00000530875 GCKRQ14397 625 aa17.51■□□□□ 0.39
NXF1-207ENST00000530875 GRM8O00222 908 aa17.5■□□□□ 0.39
NXF1-207ENST00000530875 GNAI2P04899 355 aa17.5■□□□□ 0.39
NXF1-207ENST00000530875 EZH2Q15910 746 aaKnown RBP17.5■□□□□ 0.39
NXF1-207ENST00000530875 CAMKK2Q96RR4 588 aa17.5■□□□□ 0.39
NXF1-207ENST00000530875 ISCA1Q9BUE6 129 aa17.5■□□□□ 0.39
NXF1-207ENST00000530875 RGPD3A6NKT7 1758 aaPredicted RBP17.49■□□□□ 0.39
NXF1-207ENST00000530875 RGPD4Q7Z3J3 1758 aa17.49■□□□□ 0.39
NXF1-207ENST00000530875 GPTP24298 496 aa17.49■□□□□ 0.39
NXF1-207ENST00000530875 HSP90AB3PQ58FF7 597 aa17.49■□□□□ 0.39
NXF1-207ENST00000530875 ARHGEF1Q92888 912 aaKnown RBP17.49■□□□□ 0.39
NXF1-207ENST00000530875 CWC25Q9NXE8 425 aaPredicted RBP17.49■□□□□ 0.39
NXF1-207ENST00000530875 LRRFIP2Q9Y608 721 aaKnown RBP17.49■□□□□ 0.39
NXF1-207ENST00000530875 IGHDP01880 384 aa17.49■□□□□ 0.39
NXF1-207ENST00000530875 HMGB2P26583 209 aaKnown RBP17.49■□□□□ 0.39
NXF1-207ENST00000530875 TRAPPC3LQ5T215 181 aa17.49■□□□□ 0.39
NXF1-207ENST00000530875 CCDC191Q8NCU4 936 aa17.49■□□□□ 0.39
NXF1-207ENST00000530875 IBTKQ9P2D0 1353 aaPredicted RBP17.49■□□□□ 0.39
NXF1-207ENST00000530875 JARID2Q92833 1246 aaPredicted RBP17.48■□□□□ 0.39
NXF1-207ENST00000530875 SRP68Q9UHB9 627 aaKnown RBP17.48■□□□□ 0.39
NXF1-207ENST00000530875 NARFQ9UHQ1 456 aa17.48■□□□□ 0.39
NXF1-207ENST00000530875 AFDNP55196 1824 aaKnown RBP17.48■□□□□ 0.39
NXF1-207ENST00000530875 UTYO14607 1347 aa17.48■□□□□ 0.39
NXF1-207ENST00000530875 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.47■□□□□ 0.39
NXF1-207ENST00000530875 BAG6P46379 1132 aa17.47■□□□□ 0.39
NXF1-207ENST00000530875 TRIM28Q13263 835 aaKnown RBP17.47■□□□□ 0.39
NXF1-207ENST00000530875 ZNF827Q17R98 1081 aa17.47■□□□□ 0.39
NXF1-207ENST00000530875 DEFB132Q7Z7B7 95 aa17.47■□□□□ 0.39
NXF1-207ENST00000530875 USPL1Q5W0Q7 1092 aa17.47■□□□□ 0.39
NXF1-207ENST00000530875 CEP85Q6P2H3 762 aa17.47■□□□□ 0.39
NXF1-207ENST00000530875 SIRT2Q8IXJ6 389 aa17.47■□□□□ 0.39
NXF1-207ENST00000530875 AKT1S1Q96B36 256 aa17.47■□□□□ 0.39
NXF1-207ENST00000530875 ZPR1O75312 459 aa17.46■□□□□ 0.39
NXF1-207ENST00000530875 ADRA2BP18089 450 aa17.46■□□□□ 0.39
NXF1-207ENST00000530875 RFC4P35249 363 aa17.46■□□□□ 0.39
NXF1-207ENST00000530875 UBE3BQ7Z3V4 1068 aa17.46■□□□□ 0.39
NXF1-207ENST00000530875 NLRP10Q86W26 655 aa17.46■□□□□ 0.39
NXF1-207ENST00000530875 ZNF34Q8IZ26 560 aa17.46■□□□□ 0.39
NXF1-207ENST00000530875 RWDD1Q9H446 243 aaPredicted RBP17.46■□□□□ 0.39
NXF1-207ENST00000530875 ZNF652Q9Y2D9 606 aa17.46■□□□□ 0.39
NXF1-207ENST00000530875 KDM2BQ8NHM5 1336 aa17.46■□□□□ 0.39
NXF1-207ENST00000530875 BCORQ6W2J9 1755 aa17.46■□□□□ 0.38
NXF1-207ENST00000530875 NUP98P52948 1817 aa17.45■□□□□ 0.38
NXF1-207ENST00000530875 SSFA2P28290 1259 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 132.4 ms