RNA–Protein interactions for RNA: ENST00000530730.1

CHKA-205, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-205ENST00000530730 CDK2AP1O14519 115 aa11.86□□□□□ -0.51
CHKA-205ENST00000530730 RUBCNLQ9H714 662 aa11.86□□□□□ -0.51
CHKA-205ENST00000530730 ATXN7L1Q9ULK2 861 aaPredicted RBP11.86□□□□□ -0.51
CHKA-205ENST00000530730 IQSEC3Q9UPP2 1182 aaPredicted RBP11.86□□□□□ -0.51
CHKA-205ENST00000530730 PHLDB1Q86UU1 1377 aa11.86□□□□□ -0.51
CHKA-205ENST00000530730 A6NJY4 79 aa11.85□□□□□ -0.51
CHKA-205ENST00000530730 GDF11O95390 407 aa11.85□□□□□ -0.51
CHKA-205ENST00000530730 PLA2G4AP47712 749 aa11.85□□□□□ -0.51
CHKA-205ENST00000530730 TMEM132AQ24JP5 1023 aa11.85□□□□□ -0.51
CHKA-205ENST00000530730 NDFIP2Q9NV92 336 aa11.85□□□□□ -0.51
CHKA-205ENST00000530730 SAMD9Q5K651 1589 aa11.84□□□□□ -0.51
CHKA-205ENST00000530730 BACH1O14867 736 aa11.84□□□□□ -0.51
CHKA-205ENST00000530730 PLEKHD1A6NEE1 506 aa11.83□□□□□ -0.52
CHKA-205ENST00000530730 ATP4AP20648 1035 aa11.83□□□□□ -0.52
CHKA-205ENST00000530730 GTF2IP78347 998 aa11.83□□□□□ -0.52
CHKA-205ENST00000530730 NCOA4Q13772 614 aa11.83□□□□□ -0.52
CHKA-205ENST00000530730 FIGNL1Q6PIW4 674 aa11.83□□□□□ -0.52
CHKA-205ENST00000530730 NLRP8Q86W28 1048 aa11.83□□□□□ -0.52
CHKA-205ENST00000530730 EEA1Q15075 1411 aa11.83□□□□□ -0.52
CHKA-205ENST00000530730 USP17L5A8MUK1 530 aa11.82□□□□□ -0.52
CHKA-205ENST00000530730 OIP5O43482 229 aa11.82□□□□□ -0.52
CHKA-205ENST00000530730 PLEKHM2Q8IWE5 1019 aa11.82□□□□□ -0.52
CHKA-205ENST00000530730 ADAMTS19Q8TE59 1207 aa11.82□□□□□ -0.52
CHKA-205ENST00000530730 OXCT2Q9BYC2 517 aaPredicted RBP11.82□□□□□ -0.52
CHKA-205ENST00000530730 DNAAF2Q9NVR5 837 aaKnown RBP11.82□□□□□ -0.52
CHKA-205ENST00000530730 ZDHHC3Q9NYG2 299 aa11.82□□□□□ -0.52
CHKA-205ENST00000530730 FHOD3Q2V2M9 1422 aa11.82□□□□□ -0.52
CHKA-205ENST00000530730 NUP153P49790 1475 aaKnown RBP11.82□□□□□ -0.52
CHKA-205ENST00000530730 HECW2Q9P2P5 1572 aa11.81□□□□□ -0.52
CHKA-205ENST00000530730 SERTAD1Q9UHV2 236 aa11.81□□□□□ -0.52
CHKA-205ENST00000530730 GDF2Q9UK05 429 aaPredicted RBP11.81□□□□□ -0.52
CHKA-205ENST00000530730 ABCA9Q8IUA7 1624 aa11.81□□□□□ -0.52
CHKA-205ENST00000530730 RAPGEF6Q8TEU7 1601 aa11.81□□□□□ -0.52
CHKA-205ENST00000530730 NBPF1Q3BBV0 1214 aa11.8□□□□□ -0.52
CHKA-205ENST00000530730 DNMT3AQ9Y6K1 912 aaPredicted RBP11.8□□□□□ -0.52
CHKA-205ENST00000530730 NEO1Q92859 1461 aa11.8□□□□□ -0.52
CHKA-205ENST00000530730 POM121CA8CG34 1229 aa11.79□□□□□ -0.52
CHKA-205ENST00000530730 IRS1P35568 1242 aa11.79□□□□□ -0.52
CHKA-205ENST00000530730 TRIM50Q86XT4 487 aa11.79□□□□□ -0.52
CHKA-205ENST00000530730 KLRG1Q96E93 195 aa11.79□□□□□ -0.52
CHKA-205ENST00000530730 SCHIP1Q9P0W5 487 aaPredicted RBP11.79□□□□□ -0.52
CHKA-205ENST00000530730 PHF20L1A8MW92 1017 aa11.78□□□□□ -0.52
CHKA-205ENST00000530730 BNIP3LO60238 219 aa11.78□□□□□ -0.52
CHKA-205ENST00000530730 PCDHGC4Q9Y5F7 938 aa11.78□□□□□ -0.52
CHKA-205ENST00000530730 KIF21BO75037 1637 aa11.78□□□□□ -0.52
CHKA-205ENST00000530730 FGFR3P22607 806 aa11.77□□□□□ -0.53
CHKA-205ENST00000530730 KCTD17Q8N5Z5 321 aa11.77□□□□□ -0.53
CHKA-205ENST00000530730 BEND7Q8N7W2 519 aaPredicted RBP11.77□□□□□ -0.53
CHKA-205ENST00000530730 NEDD1Q8NHV4 660 aa11.77□□□□□ -0.53
CHKA-205ENST00000530730 ABHD17AQ96GS6 310 aa11.77□□□□□ -0.53
CHKA-205ENST00000530730 UCN2Q96RP3 112 aa11.77□□□□□ -0.53
CHKA-205ENST00000530730 ZNF358Q9NW07 568 aa11.77□□□□□ -0.53
CHKA-205ENST00000530730 USP3Q9Y6I4 520 aa11.77□□□□□ -0.53
CHKA-205ENST00000530730 ARID4BQ4LE39 1312 aaPredicted RBP11.77□□□□□ -0.53
CHKA-205ENST00000530730 TATP17735 454 aaPredicted RBP11.76□□□□□ -0.53
CHKA-205ENST00000530730 EPHA4P54764 986 aa11.76□□□□□ -0.53
CHKA-205ENST00000530730 FOXK2Q01167 660 aa11.76□□□□□ -0.53
CHKA-205ENST00000530730 GOLGA6L1Q8N7Z2 621 aa11.76□□□□□ -0.53
CHKA-205ENST00000530730 AIDAQ96BJ3 306 aa11.76□□□□□ -0.53
CHKA-205ENST00000530730 ZCCHC2Q9C0B9 1178 aaKnown RBP11.76□□□□□ -0.53
CHKA-205ENST00000530730 ATP9BO43861 1147 aa11.75□□□□□ -0.53
CHKA-205ENST00000530730 ATP1A2P50993 1020 aa11.75□□□□□ -0.53
CHKA-205ENST00000530730 PSME1Q06323 249 aa11.75□□□□□ -0.53
CHKA-205ENST00000530730 HDGFL1Q5TGJ6 251 aa11.75□□□□□ -0.53
CHKA-205ENST00000530730 PODNQ7Z5L7 613 aa11.75□□□□□ -0.53
CHKA-205ENST00000530730 AKNAQ7Z591 1439 aa11.75□□□□□ -0.53
CHKA-205ENST00000530730 A0A1W2PNR3 127 aa11.74□□□□□ -0.53
CHKA-205ENST00000530730 USP17L3A6NCW0 530 aa11.74□□□□□ -0.53
CHKA-205ENST00000530730 USP17L4A6NCW7 530 aa11.74□□□□□ -0.53
CHKA-205ENST00000530730 BMP4P12644 408 aa11.74□□□□□ -0.53
CHKA-205ENST00000530730 FAM182BQ5T319 152 aa11.74□□□□□ -0.53
CHKA-205ENST00000530730 SAMD5Q5TGI4 173 aa11.74□□□□□ -0.53
CHKA-205ENST00000530730 USP17L2Q6R6M4 530 aa11.74□□□□□ -0.53
CHKA-205ENST00000530730 USP17L1Q7RTZ2 530 aa11.74□□□□□ -0.53
CHKA-205ENST00000530730 DEPDC4Q8N2C3 294 aa11.74□□□□□ -0.53
CHKA-205ENST00000530730 FNBP4Q8N3X1 1017 aaPredicted RBP11.74□□□□□ -0.53
CHKA-205ENST00000530730 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.74□□□□□ -0.53
CHKA-205ENST00000530730 CABP1Q9NZU7 370 aa11.74□□□□□ -0.53
CHKA-205ENST00000530730 PTPRMP28827 1452 aa11.74□□□□□ -0.53
CHKA-205ENST00000530730 C2CD2LO14523 706 aa11.73□□□□□ -0.53
CHKA-205ENST00000530730 DENND4BO75064 1496 aaPredicted RBP11.73□□□□□ -0.53
CHKA-205ENST00000530730 TEAD4Q15561 434 aa11.73□□□□□ -0.53
CHKA-205ENST00000530730 SLCO4C1Q6ZQN7 724 aa11.73□□□□□ -0.53
CHKA-205ENST00000530730 GPC6Q9Y625 555 aaPredicted RBP11.73□□□□□ -0.53
CHKA-205ENST00000530730 M0R2N6 131 aa11.72□□□□□ -0.53
CHKA-205ENST00000530730 ATXN7O15265 892 aaPredicted RBP11.72□□□□□ -0.53
CHKA-205ENST00000530730 ZIC5Q96T25 663 aa11.72□□□□□ -0.53
CHKA-205ENST00000530730 ADAMTSL3P82987 1691 aa11.71□□□□□ -0.53
CHKA-205ENST00000530730 FRMPD1Q5SYB0 1578 aa11.71□□□□□ -0.53
CHKA-205ENST00000530730 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.71□□□□□ -0.53
CHKA-205ENST00000530730 FANCAO15360 1455 aa11.71□□□□□ -0.53
CHKA-205ENST00000530730 CNTNAP5Q8WYK1 1306 aa11.71□□□□□ -0.53
CHKA-205ENST00000530730 ZBTB7BO15156 539 aaPredicted RBP11.71□□□□□ -0.53
CHKA-205ENST00000530730 IGHA1P01876 353 aa11.71□□□□□ -0.53
CHKA-205ENST00000530730 FAM157BP0CG42 384 aa11.71□□□□□ -0.53
CHKA-205ENST00000530730 ARAFP10398 606 aa11.71□□□□□ -0.53
CHKA-205ENST00000530730 CTBSQ01459 385 aa11.71□□□□□ -0.53
CHKA-205ENST00000530730 ARSJQ5FYB0 599 aaPredicted RBP11.71□□□□□ -0.53
CHKA-205ENST00000530730 C1orf229Q6ZS94 237 aaPredicted RBP11.71□□□□□ -0.53
CHKA-205ENST00000530730 LARGE2Q8N3Y3 721 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms