RNA–Protein interactions for RNA: ENST00000530495.1

CAPN1-219, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-219ENST00000530495 BCORQ6W2J9 1755 aa19.98■□□□□ 0.79
CAPN1-219ENST00000530495 CLEC4GQ6UXB4 293 aa19.98■□□□□ 0.79
CAPN1-219ENST00000530495 SLX4Q8IY92 1834 aa19.97■□□□□ 0.79
CAPN1-219ENST00000530495 SNRPA1P09661 255 aaKnown RBP19.97■□□□□ 0.79
CAPN1-219ENST00000530495 ST5P78524 1137 aa19.97■□□□□ 0.79
CAPN1-219ENST00000530495 PRAMEF22A3QJZ6 481 aa19.96■□□□□ 0.79
CAPN1-219ENST00000530495 NPHP1O15259 732 aa19.96■□□□□ 0.79
CAPN1-219ENST00000530495 MASTLQ96GX5 879 aa19.96■□□□□ 0.79
CAPN1-219ENST00000530495 TAOK3Q9H2K8 898 aa19.96■□□□□ 0.79
CAPN1-219ENST00000530495 U2AF1L5P0DN76 240 aaPredicted RBP19.95■□□□□ 0.78
CAPN1-219ENST00000530495 PIP4K2AP48426 406 aaPredicted RBP19.95■□□□□ 0.78
CAPN1-219ENST00000530495 U2AF1Q01081 240 aaKnown RBP eCLIP19.95■□□□□ 0.78
CAPN1-219ENST00000530495 SOGA3Q5TF21 947 aa19.95■□□□□ 0.78
CAPN1-219ENST00000530495 PRPF40BQ6NWY9 871 aaKnown RBP19.95■□□□□ 0.78
CAPN1-219ENST00000530495 MCM10Q7L590 875 aa19.95■□□□□ 0.78
CAPN1-219ENST00000530495 RTF1Q92541 710 aaKnown RBP19.95■□□□□ 0.78
CAPN1-219ENST00000530495 ARFGEF2Q9Y6D5 1785 aa19.95■□□□□ 0.78
CAPN1-219ENST00000530495 CACNA1SQ13698 1873 aa19.94■□□□□ 0.78
CAPN1-219ENST00000530495 HTATSF1O43719 755 aaKnown RBP19.94■□□□□ 0.78
CAPN1-219ENST00000530495 PPP2R1AP30153 589 aa19.94■□□□□ 0.78
CAPN1-219ENST00000530495 COL13A1Q5TAT6 717 aaPredicted RBP19.94■□□□□ 0.78
CAPN1-219ENST00000530495 RGL2O15211 777 aa19.93■□□□□ 0.78
CAPN1-219ENST00000530495 NBPF5PQ86XG9 351 aaPredicted RBP19.93■□□□□ 0.78
CAPN1-219ENST00000530495 C7orf43Q8WVR3 580 aa19.93■□□□□ 0.78
CAPN1-219ENST00000530495 ZNF652Q9Y2D9 606 aa19.93■□□□□ 0.78
CAPN1-219ENST00000530495 KLRG2A4D1S0 409 aaPredicted RBP19.92■□□□□ 0.78
CAPN1-219ENST00000530495 NBPF26B4DH59 902 aa19.92■□□□□ 0.78
CAPN1-219ENST00000530495 NBPF10Q6P3W6 841 aaKnown RBP19.92■□□□□ 0.78
CAPN1-219ENST00000530495 NBPF15Q8N660 670 aa19.92■□□□□ 0.78
CAPN1-219ENST00000530495 DDNO94850 711 aaPredicted RBP19.91■□□□□ 0.78
CAPN1-219ENST00000530495 TPTE2Q6XPS3 522 aa19.91■□□□□ 0.78
CAPN1-219ENST00000530495 NPR1P16066 1061 aa19.9■□□□□ 0.78
CAPN1-219ENST00000530495 DCTN1Q14203 1278 aa19.9■□□□□ 0.78
CAPN1-219ENST00000530495 TAF7Q15545 349 aaPredicted RBP19.89■□□□□ 0.77
CAPN1-219ENST00000530495 CHADLQ6NUI6 762 aa19.89■□□□□ 0.77
CAPN1-219ENST00000530495 NIP7Q9Y221 180 aaKnown RBP eCLIP19.88■□□□□ 0.77
CAPN1-219ENST00000530495 CCDC93Q567U6 631 aa19.87■□□□□ 0.77
CAPN1-219ENST00000530495 L3MBTL3Q96JM7 780 aaPredicted RBP19.86■□□□□ 0.77
CAPN1-219ENST00000530495 PCNTO95613 3336 aa19.86■□□□□ 0.77
CAPN1-219ENST00000530495 SCN4AP35499 1836 aa19.86■□□□□ 0.77
CAPN1-219ENST00000530495 IQCA1LA6NCM1 817 aa19.85■□□□□ 0.77
CAPN1-219ENST00000530495 POTEIP0CG38 1075 aa19.85■□□□□ 0.77
CAPN1-219ENST00000530495 POTEJP0CG39 1038 aa19.85■□□□□ 0.77
CAPN1-219ENST00000530495 FKBP4Q02790 459 aaKnown RBP eCLIP19.85■□□□□ 0.77
CAPN1-219ENST00000530495 HLFQ16534 295 aa19.85■□□□□ 0.77
CAPN1-219ENST00000530495 CREBZFQ9NS37 354 aa19.85■□□□□ 0.77
CAPN1-219ENST00000530495 MIS18AQ9NYP9 233 aa19.85■□□□□ 0.77
CAPN1-219ENST00000530495 HSPA1AP0DMV8 641 aaKnown RBP19.84■□□□□ 0.77
CAPN1-219ENST00000530495 HSPA1BP0DMV9 641 aaKnown RBP19.84■□□□□ 0.77
CAPN1-219ENST00000530495 ALDH1B1P30837 517 aa19.84■□□□□ 0.77
CAPN1-219ENST00000530495 RTKN2Q8IZC4 609 aa19.84■□□□□ 0.77
CAPN1-219ENST00000530495 FAM177BA6PVY3 158 aa19.83■□□□□ 0.77
CAPN1-219ENST00000530495 TNS4Q8IZW8 715 aa19.83■□□□□ 0.77
CAPN1-219ENST00000530495 TAF1DQ9H5J8 278 aaPredicted RBP19.83■□□□□ 0.77
CAPN1-219ENST00000530495 DLG5Q8TDM6 1919 aa19.82■□□□□ 0.76
CAPN1-219ENST00000530495 ERVV-1B6SEH8 477 aa19.82■□□□□ 0.76
CAPN1-219ENST00000530495 OLFM4Q6UX06 510 aa19.82■□□□□ 0.76
CAPN1-219ENST00000530495 LDHDQ86WU2 507 aa19.82■□□□□ 0.76
CAPN1-219ENST00000530495 PNISRQ8TF01 805 aaKnown RBP19.82■□□□□ 0.76
CAPN1-219ENST00000530495 ZNF277Q9NRM2 450 aaPredicted RBP19.82■□□□□ 0.76
CAPN1-219ENST00000530495 LAMB4A4D0S4 1761 aa19.82■□□□□ 0.76
CAPN1-219ENST00000530495 GTF2E1P29083 439 aaPredicted RBP19.81■□□□□ 0.76
CAPN1-219ENST00000530495 NUP98P52948 1817 aa19.81■□□□□ 0.76
CAPN1-219ENST00000530495 PASKQ96RG2 1323 aa19.8■□□□□ 0.76
CAPN1-219ENST00000530495 NEFMP07197 916 aa19.8■□□□□ 0.76
CAPN1-219ENST00000530495 NYXQ9GZU5 481 aa19.8■□□□□ 0.76
CAPN1-219ENST00000530495 KDM3BQ7LBC6 1761 aa19.8■□□□□ 0.76
CAPN1-219ENST00000530495 CRY2Q49AN0 593 aa19.79■□□□□ 0.76
CAPN1-219ENST00000530495 SYNE4Q8N205 404 aa19.79■□□□□ 0.76
CAPN1-219ENST00000530495 PLEKHF1Q96S99 279 aa19.79■□□□□ 0.76
CAPN1-219ENST00000530495 MKRN1Q9UHC7 482 aaKnown RBP19.79■□□□□ 0.76
CAPN1-219ENST00000530495 MAP3K15Q6ZN16 1313 aa19.78■□□□□ 0.76
CAPN1-219ENST00000530495 ZNF541Q9H0D2 1346 aa19.78■□□□□ 0.76
CAPN1-219ENST00000530495 FZD9O00144 591 aa19.78■□□□□ 0.76
CAPN1-219ENST00000530495 ITGBL1O95965 494 aaPredicted RBP19.78■□□□□ 0.76
CAPN1-219ENST00000530495 IARSP41252 1262 aaKnown RBP19.78■□□□□ 0.76
CAPN1-219ENST00000530495 EIF4A1P60842 406 aaKnown RBP19.78■□□□□ 0.76
CAPN1-219ENST00000530495 NGEFQ8N5V2 710 aa19.78■□□□□ 0.76
CAPN1-219ENST00000530495 HACL1Q9UJ83 578 aa19.77■□□□□ 0.76
CAPN1-219ENST00000530495 RRP7AQ9Y3A4 280 aaKnown RBP19.77■□□□□ 0.76
CAPN1-219ENST00000530495 CC2D2BQ6DHV5 1058 aa19.76■□□□□ 0.75
CAPN1-219ENST00000530495 TTLL7Q6ZT98 887 aa19.76■□□□□ 0.75
CAPN1-219ENST00000530495 NUTM1Q86Y26 1132 aa19.76■□□□□ 0.75
CAPN1-219ENST00000530495 PSMD1Q99460 953 aa19.76■□□□□ 0.75
CAPN1-219ENST00000530495 SNED1Q8TER0 1413 aa19.76■□□□□ 0.75
CAPN1-219ENST00000530495 CNTNAP1P78357 1384 aa19.75■□□□□ 0.75
CAPN1-219ENST00000530495 CAPN15O75808 1086 aa19.75■□□□□ 0.75
CAPN1-219ENST00000530495 HOXA10P31260 410 aaPredicted RBP19.75■□□□□ 0.75
CAPN1-219ENST00000530495 EPHX2P34913 555 aa19.75■□□□□ 0.75
CAPN1-219ENST00000530495 NFE2L2Q16236 605 aa19.75■□□□□ 0.75
CAPN1-219ENST00000530495 KIF6Q6ZMV9 814 aa19.75■□□□□ 0.75
CAPN1-219ENST00000530495 PNMA8AQ86V59 439 aaPredicted RBP19.75■□□□□ 0.75
CAPN1-219ENST00000530495 GPC2Q8N158 579 aa19.75■□□□□ 0.75
CAPN1-219ENST00000530495 ADAMTSL1Q8N6G6 1762 aa19.75■□□□□ 0.75
CAPN1-219ENST00000530495 ABCC12Q96J65 1359 aa19.74■□□□□ 0.75
CAPN1-219ENST00000530495 TMEM88BA6NKF7 163 aa19.74■□□□□ 0.75
CAPN1-219ENST00000530495 GRIPAP1Q4V328 841 aa19.74■□□□□ 0.75
CAPN1-219ENST00000530495 EAPPQ56P03 285 aaPredicted RBP19.74■□□□□ 0.75
CAPN1-219ENST00000530495 THUMPD2Q9BTF0 503 aaKnown RBP19.74■□□□□ 0.75
CAPN1-219ENST00000530495 PNNQ9H307 717 aaKnown RBP19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms