RNA–Protein interactions for RNA: ENST00000528475.1

GSDMD-208, Transcript of gasdermin D, human

TSL 2

Gene GSDMD, Length 2,067 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GSDMD-208	ENST00000528475	C1orf141	Q5JVX7	400 aa		28.19	■■■□□ 2.1
GSDMD-208	ENST00000528475	KCNB2	Q92953	911 aa		28.19	■■■□□ 2.1
GSDMD-208	ENST00000528475	ECHDC1	Q9NTX5	307 aa		28.19	■■■□□ 2.1
GSDMD-208	ENST00000528475	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	28.19	■■■□□ 2.1
GSDMD-208	ENST00000528475	OFD1	O75665	1012 aa		28.19	■■■□□ 2.1
GSDMD-208	ENST00000528475	CWC27	Q6UX04	472 aa	Known RBP	28.19	■■■□□ 2.1
GSDMD-208	ENST00000528475	ARHGEF25	Q86VW2	580 aa		28.19	■■■□□ 2.1
GSDMD-208	ENST00000528475	GPATCH3	Q96I76	525 aa		28.19	■■■□□ 2.1
GSDMD-208	ENST00000528475	MAP3K2	Q9Y2U5	619 aa		28.19	■■■□□ 2.1
GSDMD-208	ENST00000528475	SIPA1L3	O60292	1781 aa	Predicted RBP	28.18	■■■□□ 2.1
GSDMD-208	ENST00000528475	TPM2	P07951	284 aa		28.18	■■■□□ 2.1
GSDMD-208	ENST00000528475	ESCO1	Q5FWF5	840 aa		28.18	■■■□□ 2.1
GSDMD-208	ENST00000528475	TSPY26P	Q9H489	355 aa		28.18	■■■□□ 2.1
GSDMD-208	ENST00000528475	DIAPH3	Q9NSV4	1193 aa		28.18	■■■□□ 2.1
GSDMD-208	ENST00000528475	ADAMTS7	Q9UKP4	1686 aa		28.18	■■■□□ 2.1
GSDMD-208	ENST00000528475	ZNF500	O60304	480 aa	Predicted RBP	28.17	■■■□□ 2.1
GSDMD-208	ENST00000528475	RUFY3	Q7L099	469 aa		28.17	■■■□□ 2.1
GSDMD-208	ENST00000528475	USP48	Q86UV5	1035 aa		28.17	■■■□□ 2.1
GSDMD-208	ENST00000528475	C9orf78	Q9NZ63	289 aa	Predicted RBP	28.17	■■■□□ 2.1
GSDMD-208	ENST00000528475	TM6SF1	Q9BZW5	370 aa		28.17	■■■□□ 2.1
GSDMD-208	ENST00000528475	UTY	O14607	1347 aa		28.16	■■■□□ 2.1
GSDMD-208	ENST00000528475	ZSCAN22	P10073	491 aa	Predicted RBP	28.16	■■■□□ 2.1
GSDMD-208	ENST00000528475	MCM5	P33992	734 aa		28.16	■■■□□ 2.1
GSDMD-208	ENST00000528475	HYPK	Q9NX55	129 aa		28.15	■■■□□ 2.1
GSDMD-208	ENST00000528475	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	28.15	■■■□□ 2.1
GSDMD-208	ENST00000528475	GADD45B	O75293	160 aa	Predicted RBP	28.14	■■■□□ 2.1
GSDMD-208	ENST00000528475	GC	P02774	474 aa		28.14	■■■□□ 2.1
GSDMD-208	ENST00000528475	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	28.14	■■■□□ 2.1
GSDMD-208	ENST00000528475	SPG7	Q9UQ90	795 aa		28.14	■■■□□ 2.1
GSDMD-208	ENST00000528475	VPS53	Q5VIR6	699 aa		28.14	■■■□□ 2.09
GSDMD-208	ENST00000528475	KLHL34	Q8N239	644 aa		28.14	■■■□□ 2.09
GSDMD-208	ENST00000528475	EVI5L	Q96CN4	794 aa		28.14	■■■□□ 2.09
GSDMD-208	ENST00000528475	TERF1	P54274	439 aa		28.13	■■■□□ 2.09
GSDMD-208	ENST00000528475	LINS1	Q8NG48	757 aa		28.13	■■■□□ 2.09
GSDMD-208	ENST00000528475	CCDC39	Q9UFE4	941 aa		28.13	■■■□□ 2.09
GSDMD-208	ENST00000528475	ZBTB7C	A1YPR0	619 aa		28.12	■■■□□ 2.09
GSDMD-208	ENST00000528475	IFIT2	P09913	472 aa	Known RBP	28.12	■■■□□ 2.09
GSDMD-208	ENST00000528475	PROSER3	Q2NL68	480 aa		28.12	■■■□□ 2.09
GSDMD-208	ENST00000528475	ZKSCAN5	Q9Y2L8	839 aa		28.12	■■■□□ 2.09
GSDMD-208	ENST00000528475	STX6	O43752	255 aa		28.12	■■■□□ 2.09
GSDMD-208	ENST00000528475	ZSCAN31	Q96LW9	406 aa	Predicted RBP	28.12	■■■□□ 2.09
GSDMD-208	ENST00000528475	CAST	P20810	708 aa	Known RBP	28.11	■■■□□ 2.09
GSDMD-208	ENST00000528475	ZSWIM6	Q9HCJ5	1215 aa		28.11	■■■□□ 2.09
GSDMD-208	ENST00000528475	SMC3	Q9UQE7	1217 aa		28.11	■■■□□ 2.09
GSDMD-208	ENST00000528475	SYT1	P21579	422 aa		28.11	■■■□□ 2.09
GSDMD-208	ENST00000528475	ANKRD24	Q8TF21	1146 aa		28.11	■■■□□ 2.09
GSDMD-208	ENST00000528475	GDPD2	Q9HCC8	539 aa		28.11	■■■□□ 2.09
GSDMD-208	ENST00000528475	ATP6V1D	Q9Y5K8	247 aa		28.11	■■■□□ 2.09
GSDMD-208	ENST00000528475	HIP1	O00291	1037 aa		28.1	■■■□□ 2.09
GSDMD-208	ENST00000528475	PTH1R	Q03431	593 aa		28.1	■■■□□ 2.09
GSDMD-208	ENST00000528475	FAM184A	Q8NB25	1140 aa		28.1	■■■□□ 2.09
GSDMD-208	ENST00000528475	SH2B1	Q9NRF2	756 aa	Predicted RBP	28.1	■■■□□ 2.09
GSDMD-208	ENST00000528475	GRM8	O00222	908 aa		28.09	■■■□□ 2.09
GSDMD-208	ENST00000528475	DDX58	O95786	925 aa	Known RBP	28.09	■■■□□ 2.09
GSDMD-208	ENST00000528475	DDX21	Q9NR30	783 aa	Known RBP eCLIP	28.09	■■■□□ 2.09
GSDMD-208	ENST00000528475	SNRK	Q9NRH2	765 aa		28.09	■■■□□ 2.09
GSDMD-208	ENST00000528475	LETM1	O95202	739 aa	Predicted RBP	28.09	■■■□□ 2.09
GSDMD-208	ENST00000528475	F13A1	P00488	732 aa		28.09	■■■□□ 2.09
GSDMD-208	ENST00000528475	NECTIN1	Q15223	517 aa		28.09	■■■□□ 2.09
GSDMD-208	ENST00000528475	UVSSA	Q2YD98	709 aa		28.09	■■■□□ 2.09
GSDMD-208	ENST00000528475	RBM33	Q96EV2	1170 aa	Known RBP	28.09	■■■□□ 2.09
GSDMD-208	ENST00000528475	PA2G4	Q9UQ80	394 aa	Known RBP	28.09	■■■□□ 2.09
GSDMD-208	ENST00000528475	CWF19L2	Q2TBE0	894 aa	Known RBP	28.08	■■■□□ 2.09
GSDMD-208	ENST00000528475	CCDC183	Q5T5S1	534 aa		28.08	■■■□□ 2.09
GSDMD-208	ENST00000528475	PDRG1	Q9NUG6	133 aa		28.08	■■■□□ 2.09
GSDMD-208	ENST00000528475	TCHH	Q07283	1943 aa		28.08	■■■□□ 2.09
GSDMD-208	ENST00000528475	UBE2H	P62256	183 aa		28.07	■■■□□ 2.08
GSDMD-208	ENST00000528475	CCDC171	Q6TFL3	1326 aa		28.07	■■■□□ 2.08
GSDMD-208	ENST00000528475	AACS	Q86V21	672 aa		28.07	■■■□□ 2.08
GSDMD-208	ENST00000528475	RNF214	Q8ND24	703 aa		28.07	■■■□□ 2.08
GSDMD-208	ENST00000528475	KAZALD1	Q96I82	304 aa		28.07	■■■□□ 2.08
GSDMD-208	ENST00000528475	SUCLG2	Q96I99	432 aa		28.07	■■■□□ 2.08
GSDMD-208	ENST00000528475	CNPY2	Q9Y2B0	182 aa		28.07	■■■□□ 2.08
GSDMD-208	ENST00000528475	CYP46A1	Q9Y6A2	500 aa		28.07	■■■□□ 2.08
GSDMD-208	ENST00000528475	TRPM3	Q9HCF6	1732 aa	Predicted RBP	28.06	■■■□□ 2.08
GSDMD-208	ENST00000528475	RRP9	O43818	475 aa	Known RBP	28.06	■■■□□ 2.08
GSDMD-208	ENST00000528475	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	28.06	■■■□□ 2.08
GSDMD-208	ENST00000528475	FOXD4L3	Q6VB84	417 aa	Predicted RBP	28.06	■■■□□ 2.08
GSDMD-208	ENST00000528475	JAKMIP1	Q96N16	626 aa	Known RBP	28.06	■■■□□ 2.08
GSDMD-208	ENST00000528475	SASH1	O94885	1247 aa		28.06	■■■□□ 2.08
GSDMD-208	ENST00000528475	PRPF40B	Q6NWY9	871 aa	Known RBP	28.06	■■■□□ 2.08
GSDMD-208	ENST00000528475	LARGE1	O95461	756 aa		28.04	■■■□□ 2.08
GSDMD-208	ENST00000528475	ADCK5	Q3MIX3	580 aa		28.04	■■■□□ 2.08
GSDMD-208	ENST00000528475	MRC1	P22897	1456 aa		28.04	■■■□□ 2.08
GSDMD-208	ENST00000528475	PRAMEF22	A3QJZ6	481 aa		28.04	■■■□□ 2.08
GSDMD-208	ENST00000528475	G3BP1	Q13283	466 aa	Known RBP eCLIP	28.04	■■■□□ 2.08
GSDMD-208	ENST00000528475	PDIA6	Q15084	440 aa		28.04	■■■□□ 2.08
GSDMD-208	ENST00000528475	CSPP1	Q1MSJ5	1256 aa		28.04	■■■□□ 2.08
GSDMD-208	ENST00000528475	MST1R	Q04912	1400 aa		28.03	■■■□□ 2.08
GSDMD-208	ENST00000528475	PDIA4	P13667	645 aa	Known RBP	28.03	■■■□□ 2.08
GSDMD-208	ENST00000528475	CPA1	P15085	419 aa		28.03	■■■□□ 2.08
GSDMD-208	ENST00000528475	ZKSCAN1	P17029	563 aa	Predicted RBP	28.03	■■■□□ 2.08
GSDMD-208	ENST00000528475	MAP4K1	Q92918	833 aa		28.03	■■■□□ 2.08
GSDMD-208	ENST00000528475	BICC1	Q9H694	974 aa	Known RBP	28.03	■■■□□ 2.08
GSDMD-208	ENST00000528475	GJB2	P29033	226 aa		28.02	■■■□□ 2.08
GSDMD-208	ENST00000528475	EAF2	Q96CJ1	260 aa	Predicted RBP	28.02	■■■□□ 2.08
GSDMD-208	ENST00000528475	ORAI2	Q96SN7	254 aa		28.02	■■■□□ 2.08
GSDMD-208	ENST00000528475	MTMR6	Q9Y217	621 aa		28.02	■■■□□ 2.08
GSDMD-208	ENST00000528475	CCDC83	Q8IWF9	413 aa		28.01	■■■□□ 2.07
GSDMD-208	ENST00000528475	LARP6	Q9BRS8	491 aa	Known RBP	28.01	■■■□□ 2.07

Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms