RNA–Protein interactions for RNA: ENST00000526193.5

RBBP4-217, Transcript of RB binding protein 4, chromatin remodeling factor, human

TSL 4

Gene RBBP4, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBBP4-217	ENST00000526193	CRY2	Q49AN0	593 aa		11.24	□□□□□ -0.61
RBBP4-217	ENST00000526193	RNF181	Q9P0P0	153 aa		11.24	□□□□□ -0.61
RBBP4-217	ENST00000526193	DLEC1	Q9Y238	1755 aa		11.23	□□□□□ -0.61
RBBP4-217	ENST00000526193	VEGFA	P15692	232 aa	Predicted RBP	11.23	□□□□□ -0.61
RBBP4-217	ENST00000526193	NPR1	P16066	1061 aa		11.23	□□□□□ -0.61
RBBP4-217	ENST00000526193	DCTN1	Q14203	1278 aa		11.23	□□□□□ -0.61
RBBP4-217	ENST00000526193	CC2D2B	Q6DHV5	1058 aa		11.23	□□□□□ -0.61
RBBP4-217	ENST00000526193	NBPF5P	Q86XG9	351 aa	Predicted RBP	11.23	□□□□□ -0.61
RBBP4-217	ENST00000526193	NYX	Q9GZU5	481 aa		11.23	□□□□□ -0.61
RBBP4-217	ENST00000526193	WWC3	Q9ULE0	1092 aa		11.23	□□□□□ -0.61
RBBP4-217	ENST00000526193	RNF123	Q5XPI4	1314 aa		11.23	□□□□□ -0.61
RBBP4-217	ENST00000526193	MYBBP1A	Q9BQG0	1328 aa	Known RBP	11.23	□□□□□ -0.61
RBBP4-217	ENST00000526193	HOXB7	P09629	217 aa		11.22	□□□□□ -0.61
RBBP4-217	ENST00000526193	ALDH1B1	P30837	517 aa		11.22	□□□□□ -0.61
RBBP4-217	ENST00000526193	HOXA10	P31260	410 aa	Predicted RBP	11.22	□□□□□ -0.61
RBBP4-217	ENST00000526193	CCDC88A	Q3V6T2	1871 aa		11.22	□□□□□ -0.61
RBBP4-217	ENST00000526193	DPY19L2	Q6NUT2	758 aa		11.22	□□□□□ -0.61
RBBP4-217	ENST00000526193	MAP3K15	Q6ZN16	1313 aa		11.22	□□□□□ -0.61
RBBP4-217	ENST00000526193	BICDL1	Q6ZP65	573 aa		11.22	□□□□□ -0.61
RBBP4-217	ENST00000526193	ZNF526	Q8TF50	670 aa	Predicted RBP	11.22	□□□□□ -0.61
RBBP4-217	ENST00000526193	NMRK2	Q9NPI5	230 aa		11.22	□□□□□ -0.61
RBBP4-217	ENST00000526193	PRAMEF22	A3QJZ6	481 aa		11.21	□□□□□ -0.61
RBBP4-217	ENST00000526193	CHL1	O00533	1208 aa		11.21	□□□□□ -0.61
RBBP4-217	ENST00000526193	TMPO	P42166	694 aa	Known RBP	11.21	□□□□□ -0.61
RBBP4-217	ENST00000526193	CNGB1	Q14028	1251 aa	Predicted RBP	11.21	□□□□□ -0.61
RBBP4-217	ENST00000526193	LRP10	Q7Z4F1	713 aa		11.21	□□□□□ -0.61
RBBP4-217	ENST00000526193	RTKN2	Q8IZC4	609 aa		11.21	□□□□□ -0.61
RBBP4-217	ENST00000526193	DNAJC5G	Q8N7S2	189 aa		11.21	□□□□□ -0.61
RBBP4-217	ENST00000526193	TAOK3	Q9H2K8	898 aa		11.21	□□□□□ -0.61
RBBP4-217	ENST00000526193	NIP7	Q9Y221	180 aa	Known RBP eCLIP	11.21	□□□□□ -0.61
RBBP4-217	ENST00000526193	SBF1	O95248	1867 aa		11.21	□□□□□ -0.62
RBBP4-217	ENST00000526193	PRELP	P51888	382 aa		11.2	□□□□□ -0.62
RBBP4-217	ENST00000526193	RIPK4	P57078	832 aa		11.2	□□□□□ -0.62
RBBP4-217	ENST00000526193	NCBP3	Q53F19	620 aa	Known RBP	11.2	□□□□□ -0.62
RBBP4-217	ENST00000526193	PARP10	Q53GL7	1025 aa		11.2	□□□□□ -0.62
RBBP4-217	ENST00000526193	SLC10A5	Q5PT55	438 aa		11.2	□□□□□ -0.62
RBBP4-217	ENST00000526193	IFFO2	Q5TF58	517 aa		11.2	□□□□□ -0.62
RBBP4-217	ENST00000526193	PRPF40B	Q6NWY9	871 aa	Known RBP	11.2	□□□□□ -0.62
RBBP4-217	ENST00000526193	ZNF34	Q8IZ26	560 aa		11.2	□□□□□ -0.62
RBBP4-217	ENST00000526193	SMC1B	Q8NDV3	1235 aa		11.2	□□□□□ -0.62
RBBP4-217	ENST00000526193	ZNF330	Q9Y3S2	320 aa	Predicted RBP	11.2	□□□□□ -0.62
RBBP4-217	ENST00000526193	BCOR	Q6W2J9	1755 aa		11.2	□□□□□ -0.62
RBBP4-217	ENST00000526193	PCNT	O95613	3336 aa		11.19	□□□□□ -0.62
RBBP4-217	ENST00000526193	CCDC93	Q567U6	631 aa		11.19	□□□□□ -0.62
RBBP4-217	ENST00000526193	GIGYF2	Q6Y7W6	1299 aa	Known RBP	11.19	□□□□□ -0.62
RBBP4-217	ENST00000526193	KIF6	Q6ZMV9	814 aa		11.19	□□□□□ -0.62
RBBP4-217	ENST00000526193	C16orf71	Q8IYS4	520 aa	Predicted RBP	11.19	□□□□□ -0.62
RBBP4-217	ENST00000526193	ZNF622	Q969S3	477 aa	Known RBP eCLIP	11.19	□□□□□ -0.62	3e-23	■□□□□ 8.3
RBBP4-217	ENST00000526193	RUNDC1	Q96C34	613 aa		11.19	□□□□□ -0.62
RBBP4-217	ENST00000526193	L3MBTL3	Q96JM7	780 aa	Predicted RBP	11.19	□□□□□ -0.62
RBBP4-217	ENST00000526193	PSMD1	Q99460	953 aa		11.19	□□□□□ -0.62
RBBP4-217	ENST00000526193	CHMP4A	Q9BY43	222 aa		11.19	□□□□□ -0.62
RBBP4-217	ENST00000526193	VPS33B	Q9H267	617 aa		11.19	□□□□□ -0.62
RBBP4-217	ENST00000526193	KDM3B	Q7LBC6	1761 aa		11.18	□□□□□ -0.62
RBBP4-217	ENST00000526193	NPHP1	O15259	732 aa		11.18	□□□□□ -0.62
RBBP4-217	ENST00000526193	C21orf2	O43822	256 aa		11.18	□□□□□ -0.62
RBBP4-217	ENST00000526193	PDIA6	Q15084	440 aa		11.18	□□□□□ -0.62
RBBP4-217	ENST00000526193	HLF	Q16534	295 aa		11.18	□□□□□ -0.62
RBBP4-217	ENST00000526193	HSP90AB3P	Q58FF7	597 aa		11.18	□□□□□ -0.62
RBBP4-217	ENST00000526193	CRAMP1	Q96RY5	1269 aa		11.18	□□□□□ -0.62
RBBP4-217	ENST00000526193	MIS18A	Q9NYP9	233 aa		11.18	□□□□□ -0.62
RBBP4-217	ENST00000526193	TSPYL4	Q9UJ04	414 aa		11.18	□□□□□ -0.62
RBBP4-217	ENST00000526193	ANKRD31	Q8N7Z5	1873 aa		11.18	□□□□□ -0.62
RBBP4-217	ENST00000526193	FKBP4	Q02790	459 aa	Known RBP eCLIP	11.17	□□□□□ -0.62
RBBP4-217	ENST00000526193	RASSF7	Q02833	373 aa		11.17	□□□□□ -0.62
RBBP4-217	ENST00000526193	ERFE	Q4G0M1	354 aa		11.17	□□□□□ -0.62
RBBP4-217	ENST00000526193	JMY	Q8N9B5	988 aa		11.17	□□□□□ -0.62
RBBP4-217	ENST00000526193	PRKRIP1	Q9H875	184 aa	Predicted RBP	11.17	□□□□□ -0.62
RBBP4-217	ENST00000526193	RRAGC	Q9HB90	399 aa		11.17	□□□□□ -0.62
RBBP4-217	ENST00000526193	TNRC6C	Q9HCJ0	1690 aa	Known RBP	11.17	□□□□□ -0.62
RBBP4-217	ENST00000526193	SNED1	Q8TER0	1413 aa		11.17	□□□□□ -0.62
RBBP4-217	ENST00000526193	LAMB4	A4D0S4	1761 aa		11.16	□□□□□ -0.62
RBBP4-217	ENST00000526193	IQCA1L	A6NCM1	817 aa		11.16	□□□□□ -0.62
RBBP4-217	ENST00000526193	POTEC	B2RU33	542 aa		11.16	□□□□□ -0.62
RBBP4-217	ENST00000526193	CALD1	Q05682	793 aa	Known RBP	11.16	□□□□□ -0.62
RBBP4-217	ENST00000526193	DDX10	Q13206	875 aa	Known RBP	11.16	□□□□□ -0.62
RBBP4-217	ENST00000526193	PPP1R42	Q7Z4L9	355 aa		11.16	□□□□□ -0.62
RBBP4-217	ENST00000526193	CFAP44	Q96MT7	982 aa		11.16	□□□□□ -0.62
RBBP4-217	ENST00000526193	DDX21	Q9NR30	783 aa	Known RBP eCLIP	11.16	□□□□□ -0.62
RBBP4-217	ENST00000526193	FER1L6	Q2WGJ9	1857 aa		11.16	□□□□□ -0.62
RBBP4-217	ENST00000526193	GTF2E1	P29083	439 aa	Predicted RBP	11.15	□□□□□ -0.62
RBBP4-217	ENST00000526193	PIP4K2A	P48426	406 aa	Predicted RBP	11.15	□□□□□ -0.62
RBBP4-217	ENST00000526193	TRIM28	Q13263	835 aa	Known RBP	11.15	□□□□□ -0.62
RBBP4-217	ENST00000526193	TTLL7	Q6ZT98	887 aa		11.15	□□□□□ -0.62
RBBP4-217	ENST00000526193	THUMPD2	Q9BTF0	503 aa	Known RBP	11.15	□□□□□ -0.62
RBBP4-217	ENST00000526193	TRIM35	Q9UPQ4	493 aa		11.15	□□□□□ -0.62
RBBP4-217	ENST00000526193	WDR90	Q96KV7	1748 aa		11.15	□□□□□ -0.63
RBBP4-217	ENST00000526193	ARFGEF2	Q9Y6D5	1785 aa		11.14	□□□□□ -0.63
RBBP4-217	ENST00000526193	FZD9	O00144	591 aa		11.14	□□□□□ -0.63
RBBP4-217	ENST00000526193	NTSR2	O95665	410 aa		11.14	□□□□□ -0.63
RBBP4-217	ENST00000526193	ZNF853	P0CG23	659 aa		11.14	□□□□□ -0.63
RBBP4-217	ENST00000526193	WDR43	Q15061	677 aa	Known RBP eCLIP	11.14	□□□□□ -0.63
RBBP4-217	ENST00000526193	KLRG1	Q96E93	195 aa		11.14	□□□□□ -0.63
RBBP4-217	ENST00000526193	ADAMTS8	Q9UP79	889 aa		11.14	□□□□□ -0.63
RBBP4-217	ENST00000526193	RRP7A	Q9Y3A4	280 aa	Known RBP	11.14	□□□□□ -0.63
RBBP4-217	ENST00000526193	DLG5	Q8TDM6	1919 aa		11.13	□□□□□ -0.63
RBBP4-217	ENST00000526193	UBN2	Q6ZU65	1347 aa		11.13	□□□□□ -0.63
RBBP4-217	ENST00000526193	BBOX1	O75936	387 aa		11.13	□□□□□ -0.63
RBBP4-217	ENST00000526193	TCIRG1	Q13488	830 aa		11.13	□□□□□ -0.63
RBBP4-217	ENST00000526193	SUSD4	Q5VX71	490 aa		11.13	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms