RNA–Protein interactions for RNA: ENST00000525918.1

VPS26B-203, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-203ENST00000525918 ST5P78524 1137 aa14.29□□□□□ -0.12
VPS26B-203ENST00000525918 DZIP3Q86Y13 1208 aaKnown RBP14.29□□□□□ -0.12
VPS26B-203ENST00000525918 RTF1Q92541 710 aaKnown RBP14.29□□□□□ -0.12
VPS26B-203ENST00000525918 CNKSR1Q969H4 720 aa14.29□□□□□ -0.12
VPS26B-203ENST00000525918 ZNF219Q9P2Y4 722 aaPredicted RBP14.29□□□□□ -0.12
VPS26B-203ENST00000525918 ERFEQ4G0M1 354 aa14.28□□□□□ -0.12
VPS26B-203ENST00000525918 STYK1Q6J9G0 422 aa14.28□□□□□ -0.12
VPS26B-203ENST00000525918 CLEC4GQ6UXB4 293 aa14.28□□□□□ -0.12
VPS26B-203ENST00000525918 LTBP3Q9NS15 1303 aa14.28□□□□□ -0.12
VPS26B-203ENST00000525918 POTECB2RU33 542 aa14.27□□□□□ -0.13
VPS26B-203ENST00000525918 SNRPA1P09661 255 aaKnown RBP14.27□□□□□ -0.13
VPS26B-203ENST00000525918 U2AF1L5P0DN76 240 aaPredicted RBP14.27□□□□□ -0.13
VPS26B-203ENST00000525918 SRGNP10124 158 aa14.27□□□□□ -0.13
VPS26B-203ENST00000525918 U2AF1Q01081 240 aaKnown RBP eCLIP14.27□□□□□ -0.13
VPS26B-203ENST00000525918 CACNB1Q02641 598 aaPredicted RBP14.27□□□□□ -0.13
VPS26B-203ENST00000525918 MASTLQ96GX5 879 aa14.27□□□□□ -0.13
VPS26B-203ENST00000525918 PCNTO95613 3336 aa14.26□□□□□ -0.13
VPS26B-203ENST00000525918 SOGA3Q5TF21 947 aa14.26□□□□□ -0.13
VPS26B-203ENST00000525918 MCM10Q7L590 875 aa14.26□□□□□ -0.13
VPS26B-203ENST00000525918 TAOK3Q9H2K8 898 aa14.26□□□□□ -0.13
VPS26B-203ENST00000525918 ZNF652Q9Y2D9 606 aa14.26□□□□□ -0.13
VPS26B-203ENST00000525918 PRAMEF22A3QJZ6 481 aa14.25□□□□□ -0.13
VPS26B-203ENST00000525918 HTATSF1O43719 755 aaKnown RBP14.25□□□□□ -0.13
VPS26B-203ENST00000525918 PPP2R1AP30153 589 aa14.25□□□□□ -0.13
VPS26B-203ENST00000525918 PIP4K2AP48426 406 aaPredicted RBP14.25□□□□□ -0.13
VPS26B-203ENST00000525918 PRPF40BQ6NWY9 871 aaKnown RBP14.25□□□□□ -0.13
VPS26B-203ENST00000525918 NBPF5PQ86XG9 351 aaPredicted RBP14.25□□□□□ -0.13
VPS26B-203ENST00000525918 DLG5Q8TDM6 1919 aa14.25□□□□□ -0.13
VPS26B-203ENST00000525918 RGL2O15211 777 aa14.24□□□□□ -0.13
VPS26B-203ENST00000525918 SCN4AP35499 1836 aa14.23□□□□□ -0.13
VPS26B-203ENST00000525918 DCTN1Q14203 1278 aa14.23□□□□□ -0.13
VPS26B-203ENST00000525918 TPTE2Q6XPS3 522 aa14.23□□□□□ -0.13
VPS26B-203ENST00000525918 LAMB4A4D0S4 1761 aa14.23□□□□□ -0.13
VPS26B-203ENST00000525918 KLRG2A4D1S0 409 aaPredicted RBP14.22□□□□□ -0.13
VPS26B-203ENST00000525918 NBPF26B4DH59 902 aa14.22□□□□□ -0.13
VPS26B-203ENST00000525918 NPR1P16066 1061 aa14.22□□□□□ -0.13
VPS26B-203ENST00000525918 TAF7Q15545 349 aaPredicted RBP14.22□□□□□ -0.13
VPS26B-203ENST00000525918 COL13A1Q5TAT6 717 aaPredicted RBP14.22□□□□□ -0.13
VPS26B-203ENST00000525918 NBPF10Q6P3W6 841 aaKnown RBP14.22□□□□□ -0.13
VPS26B-203ENST00000525918 NBPF15Q8N660 670 aa14.22□□□□□ -0.13
VPS26B-203ENST00000525918 NUP98P52948 1817 aa14.21□□□□□ -0.13
VPS26B-203ENST00000525918 DDNO94850 711 aaPredicted RBP14.21□□□□□ -0.13
VPS26B-203ENST00000525918 C7orf43Q8WVR3 580 aa14.21□□□□□ -0.13
VPS26B-203ENST00000525918 NIP7Q9Y221 180 aaKnown RBP eCLIP14.21□□□□□ -0.13
VPS26B-203ENST00000525918 NEFMP07197 916 aa14.2□□□□□ -0.14
VPS26B-203ENST00000525918 CCDC93Q567U6 631 aa14.2□□□□□ -0.14
VPS26B-203ENST00000525918 CHADLQ6NUI6 762 aa14.2□□□□□ -0.14
VPS26B-203ENST00000525918 KDM3BQ7LBC6 1761 aa14.19□□□□□ -0.14
VPS26B-203ENST00000525918 IQCA1LA6NCM1 817 aa14.19□□□□□ -0.14
VPS26B-203ENST00000525918 ALDH1B1P30837 517 aa14.19□□□□□ -0.14
VPS26B-203ENST00000525918 MIS18AQ9NYP9 233 aa14.19□□□□□ -0.14
VPS26B-203ENST00000525918 GTF2E1P29083 439 aaPredicted RBP14.18□□□□□ -0.14
VPS26B-203ENST00000525918 FKBP4Q02790 459 aaKnown RBP eCLIP14.18□□□□□ -0.14
VPS26B-203ENST00000525918 HLFQ16534 295 aa14.18□□□□□ -0.14
VPS26B-203ENST00000525918 RTKN2Q8IZC4 609 aa14.18□□□□□ -0.14
VPS26B-203ENST00000525918 PNISRQ8TF01 805 aaKnown RBP14.18□□□□□ -0.14
VPS26B-203ENST00000525918 L3MBTL3Q96JM7 780 aaPredicted RBP14.18□□□□□ -0.14
VPS26B-203ENST00000525918 CREBZFQ9NS37 354 aa14.18□□□□□ -0.14
VPS26B-203ENST00000525918 FAM177BA6PVY3 158 aa14.17□□□□□ -0.14
VPS26B-203ENST00000525918 POTEIP0CG38 1075 aa14.17□□□□□ -0.14
VPS26B-203ENST00000525918 POTEJP0CG39 1038 aa14.17□□□□□ -0.14
VPS26B-203ENST00000525918 ERVV-1B6SEH8 477 aa14.16□□□□□ -0.14
VPS26B-203ENST00000525918 HSPA1AP0DMV8 641 aaKnown RBP14.16□□□□□ -0.14
VPS26B-203ENST00000525918 HSPA1BP0DMV9 641 aaKnown RBP14.16□□□□□ -0.14
VPS26B-203ENST00000525918 TNS4Q8IZW8 715 aa14.16□□□□□ -0.14
VPS26B-203ENST00000525918 NYXQ9GZU5 481 aa14.16□□□□□ -0.14
VPS26B-203ENST00000525918 LDHDQ86WU2 507 aa14.15□□□□□ -0.14
VPS26B-203ENST00000525918 NGEFQ8N5V2 710 aa14.15□□□□□ -0.14
VPS26B-203ENST00000525918 TAF1DQ9H5J8 278 aaPredicted RBP14.15□□□□□ -0.14
VPS26B-203ENST00000525918 ZNF277Q9NRM2 450 aaPredicted RBP14.15□□□□□ -0.14
VPS26B-203ENST00000525918 EIF4A1P60842 406 aaKnown RBP14.14□□□□□ -0.15
VPS26B-203ENST00000525918 CRY2Q49AN0 593 aa14.14□□□□□ -0.15
VPS26B-203ENST00000525918 OLFM4Q6UX06 510 aa14.14□□□□□ -0.15
VPS26B-203ENST00000525918 PLEKHF1Q96S99 279 aa14.14□□□□□ -0.15
VPS26B-203ENST00000525918 PNNQ9H307 717 aaKnown RBP14.14□□□□□ -0.15
VPS26B-203ENST00000525918 RRP7AQ9Y3A4 280 aaKnown RBP14.14□□□□□ -0.15
VPS26B-203ENST00000525918 MAP3K15Q6ZN16 1313 aa14.14□□□□□ -0.15
VPS26B-203ENST00000525918 PASKQ96RG2 1323 aa14.14□□□□□ -0.15
VPS26B-203ENST00000525918 FZD9O00144 591 aa14.13□□□□□ -0.15
VPS26B-203ENST00000525918 IARSP41252 1262 aaKnown RBP14.13□□□□□ -0.15
VPS26B-203ENST00000525918 NFE2L2Q16236 605 aa14.13□□□□□ -0.15
VPS26B-203ENST00000525918 PPP4R3CPQ6ZMV5 832 aa14.13□□□□□ -0.15
VPS26B-203ENST00000525918 KIF6Q6ZMV9 814 aa14.13□□□□□ -0.15
VPS26B-203ENST00000525918 SYNE4Q8N205 404 aa14.13□□□□□ -0.15
VPS26B-203ENST00000525918 PSMD1Q99460 953 aa14.13□□□□□ -0.15
VPS26B-203ENST00000525918 MKRN1Q9UHC7 482 aaKnown RBP14.13□□□□□ -0.15
VPS26B-203ENST00000525918 HACL1Q9UJ83 578 aa14.13□□□□□ -0.15
VPS26B-203ENST00000525918 ZNF541Q9H0D2 1346 aa14.13□□□□□ -0.15
VPS26B-203ENST00000525918 ADAMTSL1Q8N6G6 1762 aa14.12□□□□□ -0.15
VPS26B-203ENST00000525918 CC2D2BQ6DHV5 1058 aa14.12□□□□□ -0.15
VPS26B-203ENST00000525918 PNMA8AQ86V59 439 aaPredicted RBP14.12□□□□□ -0.15
VPS26B-203ENST00000525918 NUTM1Q86Y26 1132 aa14.12□□□□□ -0.15
VPS26B-203ENST00000525918 JDP2Q8WYK2 163 aa14.12□□□□□ -0.15
VPS26B-203ENST00000525918 ITGBL1O95965 494 aaPredicted RBP14.11□□□□□ -0.15
VPS26B-203ENST00000525918 MYL6BP14649 208 aa14.11□□□□□ -0.15
VPS26B-203ENST00000525918 HOXA10P31260 410 aaPredicted RBP14.11□□□□□ -0.15
VPS26B-203ENST00000525918 EPHX2P34913 555 aa14.11□□□□□ -0.15
VPS26B-203ENST00000525918 RIC1Q4ADV7 1423 aa14.11□□□□□ -0.15
VPS26B-203ENST00000525918 GRIPAP1Q4V328 841 aa14.11□□□□□ -0.15
VPS26B-203ENST00000525918 EAPPQ56P03 285 aaPredicted RBP14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms