RNA–Protein interactions for RNA: ENST00000524846.5

GSDMD-202, Transcript of gasdermin D, humanhuman

TSL 2

Gene GSDMD, Length 3,462 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-202ENST00000524846 PPFIA3O75145 1194 aa18.13■□□□□ 0.49
GSDMD-202ENST00000524846 IFIT2P09913 472 aaKnown RBP18.13■□□□□ 0.49
GSDMD-202ENST00000524846 CLIP2Q9UDT6 1046 aa18.13■□□□□ 0.49
GSDMD-202ENST00000524846 GOLGA6L19H0YKK7 550 aa18.13■□□□□ 0.49
GSDMD-202ENST00000524846 CPSF1Q10570 1443 aaKnown RBP18.12■□□□□ 0.49
GSDMD-202ENST00000524846 ZNF165P49910 485 aa18.12■□□□□ 0.49
GSDMD-202ENST00000524846 CLASRPQ8N2M8 674 aaKnown RBP18.12■□□□□ 0.49
GSDMD-202ENST00000524846 DDX11Q96FC9 970 aa18.12■□□□□ 0.49
GSDMD-202ENST00000524846 MRVI1Q9Y6F6 885 aa18.12■□□□□ 0.49
GSDMD-202ENST00000524846 TTC21BQ7Z4L5 1316 aa18.12■□□□□ 0.49
GSDMD-202ENST00000524846 FGD1P98174 961 aa18.11■□□□□ 0.49
GSDMD-202ENST00000524846 FUCA2Q9BTY2 467 aa18.11■□□□□ 0.49
GSDMD-202ENST00000524846 ACEP12821 1306 aa18.11■□□□□ 0.49
GSDMD-202ENST00000524846 PI4K2BQ8TCG2 481 aa18.11■□□□□ 0.49
GSDMD-202ENST00000524846 NCBP1Q09161 790 aaKnown RBP18.11■□□□□ 0.49
GSDMD-202ENST00000524846 MAPK8IP2Q13387 824 aaPredicted RBP18.11■□□□□ 0.49
GSDMD-202ENST00000524846 PA2G4Q9UQ80 394 aaKnown RBP18.11■□□□□ 0.49
GSDMD-202ENST00000524846 A0A087WWV3 80 aa18.1■□□□□ 0.49
GSDMD-202ENST00000524846 HSP90B1P14625 803 aaKnown RBP18.1■□□□□ 0.49
GSDMD-202ENST00000524846 TPCN1Q9ULQ1 816 aa18.1■□□□□ 0.49
GSDMD-202ENST00000524846 CCDC9Q9Y3X0 531 aaKnown RBP18.1■□□□□ 0.49
GSDMD-202ENST00000524846 CDK12Q9NYV4 1490 aaPredicted RBP18.1■□□□□ 0.49
GSDMD-202ENST00000524846 ERICH4A6NGS2 130 aa18.1■□□□□ 0.49
GSDMD-202ENST00000524846 KIF20AO95235 890 aa18.1■□□□□ 0.49
GSDMD-202ENST00000524846 USHBP1Q8N6Y0 703 aa18.1■□□□□ 0.49
GSDMD-202ENST00000524846 NGDNQ8NEJ9 315 aaKnown RBP18.1■□□□□ 0.49
GSDMD-202ENST00000524846 ABCA9Q8IUA7 1624 aa18.09■□□□□ 0.49
GSDMD-202ENST00000524846 BECN2A8MW95 431 aa18.09■□□□□ 0.49
GSDMD-202ENST00000524846 ZSCAN31Q96LW9 406 aaPredicted RBP18.09■□□□□ 0.49
GSDMD-202ENST00000524846 EYA1Q99502 592 aa18.09■□□□□ 0.49
GSDMD-202ENST00000524846 AATKQ6ZMQ8 1374 aa18.09■□□□□ 0.49
GSDMD-202ENST00000524846 H3BQV1 296 aa18.09■□□□□ 0.49
GSDMD-202ENST00000524846 ARID5BQ14865 1188 aa18.09■□□□□ 0.49
GSDMD-202ENST00000524846 IFFO2Q5TF58 517 aa18.09■□□□□ 0.49
GSDMD-202ENST00000524846 OSCARQ8IYS5 282 aa18.09■□□□□ 0.49
GSDMD-202ENST00000524846 C9orf78Q9NZ63 289 aaPredicted RBP18.09■□□□□ 0.49
GSDMD-202ENST00000524846 SSH2Q76I76 1423 aa18.09■□□□□ 0.49
GSDMD-202ENST00000524846 PI4KAP2A4QPH2 592 aa18.08■□□□□ 0.49
GSDMD-202ENST00000524846 ZSCAN25Q6NSZ9 544 aa18.08■□□□□ 0.49
GSDMD-202ENST00000524846 PI4KAP1Q8N8J0 262 aa18.08■□□□□ 0.49
GSDMD-202ENST00000524846 RBM8AQ9Y5S9 174 aaKnown RBP18.08■□□□□ 0.49
GSDMD-202ENST00000524846 YEATS2Q9ULM3 1422 aa18.08■□□□□ 0.49
GSDMD-202ENST00000524846 GLRX3O76003 335 aaKnown RBP18.08■□□□□ 0.49
GSDMD-202ENST00000524846 SSH3Q8TE77 659 aa18.08■□□□□ 0.49
GSDMD-202ENST00000524846 SYTL4Q96C24 671 aaPredicted RBP18.08■□□□□ 0.49
GSDMD-202ENST00000524846 FAM227BQ96M60 508 aa18.08■□□□□ 0.49
GSDMD-202ENST00000524846 CCDC8Q9H0W5 538 aaPredicted RBP18.08■□□□□ 0.49
GSDMD-202ENST00000524846 MAP2P11137 1827 aaKnown RBP18.08■□□□□ 0.48
GSDMD-202ENST00000524846 LARP1Q6PKG0 1096 aaKnown RBP18.08■□□□□ 0.48
GSDMD-202ENST00000524846 AACSQ86V21 672 aa18.08■□□□□ 0.48
GSDMD-202ENST00000524846 SH2B1Q9NRF2 756 aaPredicted RBP18.08■□□□□ 0.48
GSDMD-202ENST00000524846 GNAT3A8MTJ3 354 aa18.07■□□□□ 0.48
GSDMD-202ENST00000524846 CACTINQ8WUQ7 758 aaKnown RBP18.07■□□□□ 0.48
GSDMD-202ENST00000524846 SIL1Q9H173 461 aa18.07■□□□□ 0.48
GSDMD-202ENST00000524846 ZNF75DP51815 510 aa18.07■□□□□ 0.48
GSDMD-202ENST00000524846 COL9A3Q14050 684 aaPredicted RBP18.07■□□□□ 0.48
GSDMD-202ENST00000524846 VPS53Q5VIR6 699 aa18.07■□□□□ 0.48
GSDMD-202ENST00000524846 CEP135Q66GS9 1140 aa18.07■□□□□ 0.48
GSDMD-202ENST00000524846 OGFRQ9NZT2 677 aa18.07■□□□□ 0.48
GSDMD-202ENST00000524846 NR1I2O75469 434 aa18.07■□□□□ 0.48
GSDMD-202ENST00000524846 BLOC1S2Q6QNY1 142 aa18.07■□□□□ 0.48
GSDMD-202ENST00000524846 ANKRD7Q92527 254 aa18.07■□□□□ 0.48
GSDMD-202ENST00000524846 PRR36Q9H6K5 1346 aa18.07■□□□□ 0.48
GSDMD-202ENST00000524846 GPATCH3Q96I76 525 aa18.06■□□□□ 0.48
GSDMD-202ENST00000524846 BOLA2Q9H3K6 86 aa18.06■□□□□ 0.48
GSDMD-202ENST00000524846 SMTNL1A8MU46 457 aa18.06■□□□□ 0.48
GSDMD-202ENST00000524846 ERCC4Q92889 916 aaPredicted RBP18.06■□□□□ 0.48
GSDMD-202ENST00000524846 CPS1P31327 1500 aa18.05■□□□□ 0.48
GSDMD-202ENST00000524846 CREB3L3Q68CJ9 461 aa18.05■□□□□ 0.48
GSDMD-202ENST00000524846 FSD1Q9BTV5 496 aa18.05■□□□□ 0.48
GSDMD-202ENST00000524846 ATP7BP35670 1465 aa18.05■□□□□ 0.48
GSDMD-202ENST00000524846 TCHHQ07283 1943 aa18.05■□□□□ 0.48
GSDMD-202ENST00000524846 PDCP20941 246 aa18.05■□□□□ 0.48
GSDMD-202ENST00000524846 USP16Q9Y5T5 823 aa18.05■□□□□ 0.48
GSDMD-202ENST00000524846 CRB1P82279 1406 aa18.05■□□□□ 0.48
GSDMD-202ENST00000524846 CCDC144BQ3MJ40 725 aa18.04■□□□□ 0.48
GSDMD-202ENST00000524846 CCDC144CPQ8IYA2 1237 aa18.04■□□□□ 0.48
GSDMD-202ENST00000524846 FEZ1Q99689 392 aa18.04■□□□□ 0.48
GSDMD-202ENST00000524846 ZBTB22O15209 634 aa18.04■□□□□ 0.48
GSDMD-202ENST00000524846 PTPN14Q15678 1187 aa18.04■□□□□ 0.48
GSDMD-202ENST00000524846 BBXQ8WY36 941 aaPredicted RBP18.04■□□□□ 0.48
GSDMD-202ENST00000524846 SCAND2PQ9GZW5 306 aaPredicted RBP18.04■□□□□ 0.48
GSDMD-202ENST00000524846 ECHDC1Q9NTX5 307 aa18.04■□□□□ 0.48
GSDMD-202ENST00000524846 PPP6R1Q9UPN7 881 aa18.04■□□□□ 0.48
GSDMD-202ENST00000524846 METP08581 1390 aa18.04■□□□□ 0.48
GSDMD-202ENST00000524846 TRERF1Q96PN7 1200 aa18.04■□□□□ 0.48
GSDMD-202ENST00000524846 CHPF2Q9P2E5 772 aa18.04■□□□□ 0.48
GSDMD-202ENST00000524846 MLH3Q9UHC1 1453 aa18.03■□□□□ 0.48
GSDMD-202ENST00000524846 NLRP6P59044 892 aa18.03■□□□□ 0.48
GSDMD-202ENST00000524846 LRRC2Q9BYS8 371 aa18.03■□□□□ 0.48
GSDMD-202ENST00000524846 FRMPD1Q5SYB0 1578 aa18.03■□□□□ 0.48
GSDMD-202ENST00000524846 SKILP12757 684 aa18.03■□□□□ 0.48
GSDMD-202ENST00000524846 CDK11BP21127 795 aaKnown RBP18.03■□□□□ 0.48
GSDMD-202ENST00000524846 IL17REQ8NFR9 667 aa18.03■□□□□ 0.48
GSDMD-202ENST00000524846 LEO1Q8WVC0 666 aaPredicted RBP18.03■□□□□ 0.48
GSDMD-202ENST00000524846 FMNL2Q96PY5 1086 aa18.03■□□□□ 0.48
GSDMD-202ENST00000524846 ZSWIM6Q9HCJ5 1215 aa18.03■□□□□ 0.48
GSDMD-202ENST00000524846 USP27XA6NNY8 438 aa18.03■□□□□ 0.48
GSDMD-202ENST00000524846 CTIFO43310 598 aaKnown RBP18.03■□□□□ 0.48
GSDMD-202ENST00000524846 JAK2O60674 1132 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 154.7 ms