RNA–Protein interactions for RNA: ENST00000519656.1

EFR3A-202, Transcript of EFR3 homolog A, humanhuman

TSL 1 (best) BASIC

Gene EFR3A, Length 5,247 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFR3A-202ENST00000519656 TAOK2Q9UL54 1235 aa3.68□□□□□ -1.82
EFR3A-202ENST00000519656 TRIM17Q9Y577 477 aa3.68□□□□□ -1.82
EFR3A-202ENST00000519656 CDC42BPAQ5VT25 1732 aa3.68□□□□□ -1.82
EFR3A-202ENST00000519656 NME9Q86XW9 330 aa3.68□□□□□ -1.82
EFR3A-202ENST00000519656 SYNE4Q8N205 404 aa3.68□□□□□ -1.82
EFR3A-202ENST00000519656 ZFYVE28Q9HCC9 887 aa3.68□□□□□ -1.82
EFR3A-202ENST00000519656 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.68□□□□□ -1.82
EFR3A-202ENST00000519656 DDNO94850 711 aaPredicted RBP3.68□□□□□ -1.82
EFR3A-202ENST00000519656 USPL1Q5W0Q7 1092 aa3.68□□□□□ -1.82
EFR3A-202ENST00000519656 DZIP3Q86Y13 1208 aaKnown RBP3.68□□□□□ -1.82
EFR3A-202ENST00000519656 GGNBP2Q9H3C7 697 aa3.68□□□□□ -1.82
EFR3A-202ENST00000519656 CDHR2Q9BYE9 1310 aa3.68□□□□□ -1.82
EFR3A-202ENST00000519656 CNTNAP4Q9C0A0 1308 aa3.68□□□□□ -1.82
EFR3A-202ENST00000519656 KIF24Q5T7B8 1368 aa3.68□□□□□ -1.82
EFR3A-202ENST00000519656 WWC1Q8IX03 1113 aa3.67□□□□□ -1.82
EFR3A-202ENST00000519656 UTP14AQ9BVJ6 771 aaKnown RBP3.67□□□□□ -1.82
EFR3A-202ENST00000519656 DDX21Q9NR30 783 aaKnown RBP eCLIP3.67□□□□□ -1.82
EFR3A-202ENST00000519656 SAGE1Q9NXZ1 904 aa3.67□□□□□ -1.82
EFR3A-202ENST00000519656 TNS2Q63HR2 1409 aa3.67□□□□□ -1.82
EFR3A-202ENST00000519656 KIF1AQ12756 1690 aa3.67□□□□□ -1.82
EFR3A-202ENST00000519656 UBR1Q8IWV7 1749 aa3.67□□□□□ -1.82
EFR3A-202ENST00000519656 SLC9C1Q4G0N8 1177 aa3.67□□□□□ -1.82
EFR3A-202ENST00000519656 CLEC4GQ6UXB4 293 aa3.67□□□□□ -1.82
EFR3A-202ENST00000519656 RAET1EQ8TD07 263 aa3.67□□□□□ -1.82
EFR3A-202ENST00000519656 NECTIN2Q92692 538 aa3.67□□□□□ -1.82
EFR3A-202ENST00000519656 HHIPL1Q96JK4 782 aa3.67□□□□□ -1.82
EFR3A-202ENST00000519656 CDC5LQ99459 802 aaKnown RBP3.67□□□□□ -1.82
EFR3A-202ENST00000519656 ZNRF3Q9ULT6 936 aa3.67□□□□□ -1.82
EFR3A-202ENST00000519656 KCNH4Q9UQ05 1017 aa3.67□□□□□ -1.82
EFR3A-202ENST00000519656 TET3O43151 1660 aa3.67□□□□□ -1.82
EFR3A-202ENST00000519656 HSPA8P11142 646 aaKnown RBP3.67□□□□□ -1.82
EFR3A-202ENST00000519656 RFX1P22670 979 aa3.67□□□□□ -1.82
EFR3A-202ENST00000519656 HOXC9P31274 260 aa3.67□□□□□ -1.82
EFR3A-202ENST00000519656 NBPF9Q3BBW0 867 aa3.67□□□□□ -1.82
EFR3A-202ENST00000519656 DCAF15Q66K64 600 aa3.67□□□□□ -1.82
EFR3A-202ENST00000519656 SAMD7Q7Z3H4 446 aa3.67□□□□□ -1.82
EFR3A-202ENST00000519656 GAS2L1Q99501 681 aaPredicted RBP3.67□□□□□ -1.82
EFR3A-202ENST00000519656 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.67□□□□□ -1.82
EFR3A-202ENST00000519656 CACNA1GO43497 2377 aa3.67□□□□□ -1.82
EFR3A-202ENST00000519656 CNTNAP1P78357 1384 aa3.67□□□□□ -1.82
EFR3A-202ENST00000519656 PLEKHH1Q9ULM0 1364 aa3.67□□□□□ -1.82
EFR3A-202ENST00000519656 SDHBP21912 280 aa3.67□□□□□ -1.82
EFR3A-202ENST00000519656 P2RX7Q99572 595 aaKnown RBP3.67□□□□□ -1.82
EFR3A-202ENST00000519656 ANKIB1Q9P2G1 1089 aa3.67□□□□□ -1.82
EFR3A-202ENST00000519656 RRP7AQ9Y3A4 280 aaKnown RBP3.67□□□□□ -1.82
EFR3A-202ENST00000519656 RGPD1P0DJD0 1748 aa3.67□□□□□ -1.82
EFR3A-202ENST00000519656 BCL9O00512 1426 aa3.67□□□□□ -1.82
EFR3A-202ENST00000519656 MAP3K19Q56UN5 1328 aa3.67□□□□□ -1.82
EFR3A-202ENST00000519656 PTPRZ1P23471 2315 aaPredicted RBP3.67□□□□□ -1.82
EFR3A-202ENST00000519656 CHRNA5P30532 468 aa3.67□□□□□ -1.82
EFR3A-202ENST00000519656 CRKLP46109 303 aaKnown RBP3.67□□□□□ -1.82
EFR3A-202ENST00000519656 DMWDQ09019 674 aa3.67□□□□□ -1.82
EFR3A-202ENST00000519656 VSIG10Q8N0Z9 540 aa3.67□□□□□ -1.82
EFR3A-202ENST00000519656 SECISBP2LQ93073 1101 aaKnown RBP3.67□□□□□ -1.82
EFR3A-202ENST00000519656 VEZTQ9HBM0 779 aa3.67□□□□□ -1.82
EFR3A-202ENST00000519656 SNRPA1P09661 255 aaKnown RBP3.66□□□□□ -1.82
EFR3A-202ENST00000519656 IL6STP40189 918 aaPredicted RBP3.66□□□□□ -1.82
EFR3A-202ENST00000519656 KCNQ4P56696 695 aa3.66□□□□□ -1.82
EFR3A-202ENST00000519656 HABP4Q5JVS0 413 aaKnown RBP3.66□□□□□ -1.82
EFR3A-202ENST00000519656 NGEFQ8N5V2 710 aa3.66□□□□□ -1.82
EFR3A-202ENST00000519656 NFATC2IPQ8NCF5 419 aa3.66□□□□□ -1.82
EFR3A-202ENST00000519656 SLC5A4Q9NY91 659 aa3.66□□□□□ -1.82
EFR3A-202ENST00000519656 RTL1A6NKG5 1358 aa3.66□□□□□ -1.82
EFR3A-202ENST00000519656 MYBBP1AQ9BQG0 1328 aaKnown RBP3.66□□□□□ -1.82
EFR3A-202ENST00000519656 RASSF10A6NK89 507 aa3.66□□□□□ -1.82
EFR3A-202ENST00000519656 DIAPH1O60610 1272 aaKnown RBP3.66□□□□□ -1.82
EFR3A-202ENST00000519656 CYP4F22Q6NT55 531 aa3.66□□□□□ -1.82
EFR3A-202ENST00000519656 APOBEC3FQ8IUX4 373 aaKnown RBP3.66□□□□□ -1.82
EFR3A-202ENST00000519656 CCDC24Q8N4L8 307 aa3.66□□□□□ -1.82
EFR3A-202ENST00000519656 CEP152O94986 1710 aa3.66□□□□□ -1.82
EFR3A-202ENST00000519656 CPSF1Q10570 1443 aaKnown RBP3.66□□□□□ -1.82
EFR3A-202ENST00000519656 CDK11BP21127 795 aaKnown RBP3.66□□□□□ -1.82
EFR3A-202ENST00000519656 CNGB1Q14028 1251 aaPredicted RBP3.66□□□□□ -1.82
EFR3A-202ENST00000519656 SP7Q8TDD2 431 aaPredicted RBP3.66□□□□□ -1.82
EFR3A-202ENST00000519656 TRIM47Q96LD4 638 aa3.66□□□□□ -1.82
EFR3A-202ENST00000519656 SLC12A5Q9H2X9 1139 aa3.66□□□□□ -1.82
EFR3A-202ENST00000519656 NSFL1CQ9UNZ2 370 aaKnown RBP3.66□□□□□ -1.82
EFR3A-202ENST00000519656 MYO3BQ8WXR4 1341 aa3.66□□□□□ -1.82
EFR3A-202ENST00000519656 LTBP3Q9NS15 1303 aa3.66□□□□□ -1.82
EFR3A-202ENST00000519656 PXDNQ92626 1479 aa3.66□□□□□ -1.82
EFR3A-202ENST00000519656 CRBNQ96SW2 442 aa3.66□□□□□ -1.82
EFR3A-202ENST00000519656 STK31Q9BXU1 1019 aa3.66□□□□□ -1.82
EFR3A-202ENST00000519656 A0A1W2PPC1 479 aa3.65□□□□□ -1.82
EFR3A-202ENST00000519656 EVI5O60447 810 aa3.65□□□□□ -1.82
EFR3A-202ENST00000519656 IGHMBP2P38935 993 aaKnown RBP3.65□□□□□ -1.82
EFR3A-202ENST00000519656 AXDND1Q5T1B0 1012 aaPredicted RBP3.65□□□□□ -1.82
EFR3A-202ENST00000519656 ZNF697Q5TEC3 545 aa3.65□□□□□ -1.82
EFR3A-202ENST00000519656 PRPF40BQ6NWY9 871 aaKnown RBP3.65□□□□□ -1.82
EFR3A-202ENST00000519656 DNAJC10Q8IXB1 793 aa3.65□□□□□ -1.82
EFR3A-202ENST00000519656 PROM2Q8N271 834 aa3.65□□□□□ -1.82
EFR3A-202ENST00000519656 COA7Q96BR5 231 aa3.65□□□□□ -1.82
EFR3A-202ENST00000519656 SMC4Q9NTJ3 1288 aa3.65□□□□□ -1.82
EFR3A-202ENST00000519656 JAG2Q9Y219 1238 aa3.65□□□□□ -1.82
EFR3A-202ENST00000519656 CARMIL3Q8ND23 1372 aa3.65□□□□□ -1.82
EFR3A-202ENST00000519656 TULP4Q9NRJ4 1543 aa3.65□□□□□ -1.82
EFR3A-202ENST00000519656 PRR36Q9H6K5 1346 aa3.65□□□□□ -1.82
EFR3A-202ENST00000519656 DCDC2CA8MYV0 355 aa3.65□□□□□ -1.83
EFR3A-202ENST00000519656 GNRH1P01148 92 aa3.65□□□□□ -1.83
EFR3A-202ENST00000519656 DLGAP5Q15398 846 aa3.65□□□□□ -1.83
EFR3A-202ENST00000519656 SKIV2LQ15477 1246 aaKnown RBP3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms