RNA–Protein interactions for RNA: ENST00000518279.5

TNPO1-211, Transcript of transportin 1, humanhuman

TSL 4

Gene TNPO1, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-211ENST00000518279 SRGNP10124 158 aa22.53■■□□□ 1.2
TNPO1-211ENST00000518279 PRPF40BQ6NWY9 871 aaKnown RBP22.53■■□□□ 1.2
TNPO1-211ENST00000518279 LTBP3Q9NS15 1303 aa22.53■■□□□ 1.2
TNPO1-211ENST00000518279 STYK1Q6J9G0 422 aa22.52■■□□□ 1.2
TNPO1-211ENST00000518279 NPM2Q86SE8 214 aaKnown RBP22.52■■□□□ 1.2
TNPO1-211ENST00000518279 TAOK3Q9H2K8 898 aa22.52■■□□□ 1.2
TNPO1-211ENST00000518279 NPHP1O15259 732 aa22.51■■□□□ 1.19
TNPO1-211ENST00000518279 POTEIP0CG38 1075 aa22.51■■□□□ 1.19
TNPO1-211ENST00000518279 POTEJP0CG39 1038 aa22.51■■□□□ 1.19
TNPO1-211ENST00000518279 ST5P78524 1137 aa22.51■■□□□ 1.19
TNPO1-211ENST00000518279 CNKSR1Q969H4 720 aa22.51■■□□□ 1.19
TNPO1-211ENST00000518279 ARFGEF2Q9Y6D5 1785 aa22.5■■□□□ 1.19
TNPO1-211ENST00000518279 DDNO94850 711 aaPredicted RBP22.5■■□□□ 1.19
TNPO1-211ENST00000518279 PPP2R1AP30153 589 aa22.5■■□□□ 1.19
TNPO1-211ENST00000518279 MCM10Q7L590 875 aa22.5■■□□□ 1.19
TNPO1-211ENST00000518279 MASTLQ96GX5 879 aa22.5■■□□□ 1.19
TNPO1-211ENST00000518279 HSPA1AP0DMV8 641 aaKnown RBP22.48■■□□□ 1.19
TNPO1-211ENST00000518279 HSPA1BP0DMV9 641 aaKnown RBP22.48■■□□□ 1.19
TNPO1-211ENST00000518279 C7orf43Q8WVR3 580 aa22.48■■□□□ 1.19
TNPO1-211ENST00000518279 CLEC4GQ6UXB4 293 aa22.47■■□□□ 1.19
TNPO1-211ENST00000518279 NBPF5PQ86XG9 351 aaPredicted RBP22.47■■□□□ 1.19
TNPO1-211ENST00000518279 TNS4Q8IZW8 715 aa22.47■■□□□ 1.19
TNPO1-211ENST00000518279 CFAP53Q96M91 514 aa22.47■■□□□ 1.19
TNPO1-211ENST00000518279 NBPF26B4DH59 902 aa22.46■■□□□ 1.19
TNPO1-211ENST00000518279 CAPN15O75808 1086 aa22.46■■□□□ 1.19
TNPO1-211ENST00000518279 SNRPA1P09661 255 aaKnown RBP22.46■■□□□ 1.19
TNPO1-211ENST00000518279 DCTN1Q14203 1278 aa22.46■■□□□ 1.19
TNPO1-211ENST00000518279 CHADLQ6NUI6 762 aa22.46■■□□□ 1.19
TNPO1-211ENST00000518279 NBPF10Q6P3W6 841 aaKnown RBP22.46■■□□□ 1.19
TNPO1-211ENST00000518279 NBPF15Q8N660 670 aa22.46■■□□□ 1.19
TNPO1-211ENST00000518279 U2AF1L5P0DN76 240 aaPredicted RBP22.45■■□□□ 1.18
TNPO1-211ENST00000518279 U2AF1Q01081 240 aaKnown RBP eCLIP22.45■■□□□ 1.18
TNPO1-211ENST00000518279 SOGA3Q5TF21 947 aa22.44■■□□□ 1.18
TNPO1-211ENST00000518279 OLFM4Q6UX06 510 aa22.44■■□□□ 1.18
TNPO1-211ENST00000518279 KLRG2A4D1S0 409 aaPredicted RBP22.43■■□□□ 1.18
TNPO1-211ENST00000518279 PIAS4Q8N2W9 510 aaPredicted RBP22.43■■□□□ 1.18
TNPO1-211ENST00000518279 RTF1Q92541 710 aaKnown RBP22.43■■□□□ 1.18
TNPO1-211ENST00000518279 NUDCQ9Y266 331 aa22.43■■□□□ 1.18
TNPO1-211ENST00000518279 NPR1P16066 1061 aa22.42■■□□□ 1.18
TNPO1-211ENST00000518279 CCDC93Q567U6 631 aa22.42■■□□□ 1.18
TNPO1-211ENST00000518279 CREBZFQ9NS37 354 aa22.42■■□□□ 1.18
TNPO1-211ENST00000518279 NIP7Q9Y221 180 aaKnown RBP eCLIP22.42■■□□□ 1.18
TNPO1-211ENST00000518279 ZNF652Q9Y2D9 606 aa22.42■■□□□ 1.18
TNPO1-211ENST00000518279 FAM177BA6PVY3 158 aa22.41■■□□□ 1.18
TNPO1-211ENST00000518279 ZNF277Q9NRM2 450 aaPredicted RBP22.41■■□□□ 1.18
TNPO1-211ENST00000518279 MKRN1Q9UHC7 482 aaKnown RBP22.41■■□□□ 1.18
TNPO1-211ENST00000518279 HLFQ16534 295 aa22.4■■□□□ 1.18
TNPO1-211ENST00000518279 TPTE2Q6XPS3 522 aa22.4■■□□□ 1.18
TNPO1-211ENST00000518279 L3MBTL3Q96JM7 780 aaPredicted RBP22.4■■□□□ 1.18
TNPO1-211ENST00000518279 MIS18AQ9NYP9 233 aa22.4■■□□□ 1.18
TNPO1-211ENST00000518279 ZNF541Q9H0D2 1346 aa22.39■■□□□ 1.18
TNPO1-211ENST00000518279 FKBP4Q02790 459 aaKnown RBP eCLIP22.39■■□□□ 1.17
TNPO1-211ENST00000518279 TAF1DQ9H5J8 278 aaPredicted RBP22.39■■□□□ 1.17
TNPO1-211ENST00000518279 SCN4AP35499 1836 aa22.38■■□□□ 1.17
TNPO1-211ENST00000518279 PASKQ96RG2 1323 aa22.38■■□□□ 1.17
TNPO1-211ENST00000518279 IQCA1LA6NCM1 817 aa22.37■■□□□ 1.17
TNPO1-211ENST00000518279 RGL2O15211 777 aa22.37■■□□□ 1.17
TNPO1-211ENST00000518279 HTATSF1O43719 755 aaKnown RBP22.37■■□□□ 1.17
TNPO1-211ENST00000518279 TAF7Q15545 349 aaPredicted RBP22.37■■□□□ 1.17
TNPO1-211ENST00000518279 LDHDQ86WU2 507 aa22.37■■□□□ 1.17
TNPO1-211ENST00000518279 LAMB4A4D0S4 1761 aa22.35■■□□□ 1.17
TNPO1-211ENST00000518279 ITGBL1O95965 494 aaPredicted RBP22.34■■□□□ 1.17
TNPO1-211ENST00000518279 RTKN2Q8IZC4 609 aa22.34■■□□□ 1.17
TNPO1-211ENST00000518279 CNTNAP1P78357 1384 aa22.34■■□□□ 1.17
TNPO1-211ENST00000518279 EAPPQ56P03 285 aaPredicted RBP22.33■■□□□ 1.17
TNPO1-211ENST00000518279 NGEFQ8N5V2 710 aa22.33■■□□□ 1.17
TNPO1-211ENST00000518279 ABCC12Q96J65 1359 aa22.33■■□□□ 1.17
TNPO1-211ENST00000518279 SNED1Q8TER0 1413 aa22.32■■□□□ 1.16
TNPO1-211ENST00000518279 DLG5Q8TDM6 1919 aa22.32■■□□□ 1.16
TNPO1-211ENST00000518279 ALDH1B1P30837 517 aa22.32■■□□□ 1.16
TNPO1-211ENST00000518279 IARSP41252 1262 aaKnown RBP22.32■■□□□ 1.16
TNPO1-211ENST00000518279 NUTM1Q86Y26 1132 aa22.32■■□□□ 1.16
TNPO1-211ENST00000518279 SYNE4Q8N205 404 aa22.32■■□□□ 1.16
TNPO1-211ENST00000518279 HACL1Q9UJ83 578 aa22.32■■□□□ 1.16
TNPO1-211ENST00000518279 ADAMTSL1Q8N6G6 1762 aa22.32■■□□□ 1.16
TNPO1-211ENST00000518279 KDM3BQ7LBC6 1761 aa22.31■■□□□ 1.16
TNPO1-211ENST00000518279 FZD9O00144 591 aa22.31■■□□□ 1.16
TNPO1-211ENST00000518279 GTF2E1P29083 439 aaPredicted RBP22.31■■□□□ 1.16
TNPO1-211ENST00000518279 CRY2Q49AN0 593 aa22.31■■□□□ 1.16
TNPO1-211ENST00000518279 NUP98P52948 1817 aa22.31■■□□□ 1.16
TNPO1-211ENST00000518279 RNF123Q5XPI4 1314 aa22.31■■□□□ 1.16
TNPO1-211ENST00000518279 FOXN1O15353 648 aa22.3■■□□□ 1.16
TNPO1-211ENST00000518279 EPHX2P34913 555 aa22.3■■□□□ 1.16
TNPO1-211ENST00000518279 TTLL7Q6ZT98 887 aa22.3■■□□□ 1.16
TNPO1-211ENST00000518279 SLC51AQ86UW1 340 aa22.3■■□□□ 1.16
TNPO1-211ENST00000518279 VEGFBP49765 207 aa22.29■■□□□ 1.16
TNPO1-211ENST00000518279 CLEC11AQ9Y240 323 aa22.29■■□□□ 1.16
TNPO1-211ENST00000518279 COL4A5P29400 1685 aa22.29■■□□□ 1.16
TNPO1-211ENST00000518279 TMEM88BA6NKF7 163 aa22.28■■□□□ 1.16
TNPO1-211ENST00000518279 ERVV-1B6SEH8 477 aa22.28■■□□□ 1.16
TNPO1-211ENST00000518279 EIF4A1P60842 406 aaKnown RBP22.28■■□□□ 1.16
TNPO1-211ENST00000518279 PSMD1Q99460 953 aa22.28■■□□□ 1.16
TNPO1-211ENST00000518279 THUMPD2Q9BTF0 503 aaKnown RBP22.28■■□□□ 1.16
TNPO1-211ENST00000518279 RRP7AQ9Y3A4 280 aaKnown RBP22.28■■□□□ 1.16
TNPO1-211ENST00000518279 MAP3K15Q6ZN16 1313 aa22.28■■□□□ 1.16
TNPO1-211ENST00000518279 DDX10Q13206 875 aaKnown RBP22.27■■□□□ 1.16
TNPO1-211ENST00000518279 MAP1SQ66K74 1059 aaPredicted RBP22.27■■□□□ 1.16
TNPO1-211ENST00000518279 NYXQ9GZU5 481 aa22.27■■□□□ 1.16
TNPO1-211ENST00000518279 UBN2Q6ZU65 1347 aa22.27■■□□□ 1.16
TNPO1-211ENST00000518279 MYL6BP14649 208 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms