RNA–Protein interactions for RNA: ENST00000515417.5

RACK1-234, Transcript of receptor for activated C kinase 1, humanhuman

TSL 3

Gene RACK1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-234ENST00000515417 PDIA6Q15084 440 aa12.63□□□□□ -0.39
RACK1-234ENST00000515417 CCDC27Q2M243 656 aa12.63□□□□□ -0.39
RACK1-234ENST00000515417 C8orf58Q8NAV2 365 aa12.63□□□□□ -0.39
RACK1-234ENST00000515417 SCN7AQ01118 1682 aa12.62□□□□□ -0.39
RACK1-234ENST00000515417 HLFQ16534 295 aa12.62□□□□□ -0.39
RACK1-234ENST00000515417 HDGFL1Q5TGJ6 251 aa12.62□□□□□ -0.39
RACK1-234ENST00000515417 CCDC24Q8N4L8 307 aa12.62□□□□□ -0.39
RACK1-234ENST00000515417 SPINK5Q9NQ38 1064 aaPredicted RBP12.62□□□□□ -0.39
RACK1-234ENST00000515417 C10orf71Q711Q0 1435 aa12.62□□□□□ -0.39
RACK1-234ENST00000515417 HTRA3P83110 453 aa12.61□□□□□ -0.39
RACK1-234ENST00000515417 LRP10Q7Z4F1 713 aa12.61□□□□□ -0.39
RACK1-234ENST00000515417 TSPYL6Q8N831 410 aa12.61□□□□□ -0.39
RACK1-234ENST00000515417 ZBTB3Q9H5J0 574 aa12.61□□□□□ -0.39
RACK1-234ENST00000515417 CHPF2Q9P2E5 772 aa12.61□□□□□ -0.39
RACK1-234ENST00000515417 CARMIL3Q8ND23 1372 aa12.6□□□□□ -0.39
RACK1-234ENST00000515417 FAM177BA6PVY3 158 aa12.6□□□□□ -0.39
RACK1-234ENST00000515417 SERPINB2P05120 415 aa12.6□□□□□ -0.39
RACK1-234ENST00000515417 AIMP1Q12904 312 aaKnown RBP12.6□□□□□ -0.39
RACK1-234ENST00000515417 XAGE3Q8WTP9 111 aa12.6□□□□□ -0.39
RACK1-234ENST00000515417 FANCIQ9NVI1 1328 aa12.6□□□□□ -0.39
RACK1-234ENST00000515417 A0A0G2JLW4 131 aa12.59□□□□□ -0.39
RACK1-234ENST00000515417 TCERG1O14776 1098 aaKnown RBP12.59□□□□□ -0.39
RACK1-234ENST00000515417 KIF6Q6ZMV9 814 aa12.59□□□□□ -0.39
RACK1-234ENST00000515417 IL16Q14005 1332 aa12.59□□□□□ -0.39
RACK1-234ENST00000515417 ERBB4Q15303 1308 aa12.59□□□□□ -0.39
RACK1-234ENST00000515417 MAP3K15Q6ZN16 1313 aa12.59□□□□□ -0.39
RACK1-234ENST00000515417 PXDNLA1KZ92 1463 aa12.59□□□□□ -0.39
RACK1-234ENST00000515417 BCORQ6W2J9 1755 aa12.58□□□□□ -0.39
RACK1-234ENST00000515417 HOXB7P09629 217 aa12.58□□□□□ -0.4
RACK1-234ENST00000515417 DPEP1P16444 411 aa12.58□□□□□ -0.4
RACK1-234ENST00000515417 GPTP24298 496 aa12.58□□□□□ -0.4
RACK1-234ENST00000515417 CHRNA5P30532 468 aa12.58□□□□□ -0.4
RACK1-234ENST00000515417 COPS6Q7L5N1 327 aa12.58□□□□□ -0.4
RACK1-234ENST00000515417 WDR63Q8IWG1 891 aa12.58□□□□□ -0.4
RACK1-234ENST00000515417 ZNF428Q96B54 188 aa12.58□□□□□ -0.4
RACK1-234ENST00000515417 NIP7Q9Y221 180 aaKnown RBP eCLIP12.58□□□□□ -0.44e-11■□□□□ 9
RACK1-234ENST00000515417 N4BP2Q86UW6 1770 aaPredicted RBP12.58□□□□□ -0.4
RACK1-234ENST00000515417 NCBP3Q53F19 620 aaKnown RBP12.57□□□□□ -0.4
RACK1-234ENST00000515417 DNAJC5GQ8N7S2 189 aa12.57□□□□□ -0.4
RACK1-234ENST00000515417 SETDB2Q96T68 719 aa12.57□□□□□ -0.4
RACK1-234ENST00000515417 NMRK2Q9NPI5 230 aa12.57□□□□□ -0.4
RACK1-234ENST00000515417 DDX21Q9NR30 783 aaKnown RBP eCLIP12.57□□□□□ -0.4
RACK1-234ENST00000515417 ZNF652Q9Y2D9 606 aa12.57□□□□□ -0.4
RACK1-234ENST00000515417 ZNF521Q96K83 1311 aa12.57□□□□□ -0.4
RACK1-234ENST00000515417 EXOSC9Q06265 439 aaKnown RBP12.56□□□□□ -0.4
RACK1-234ENST00000515417 PRR5LQ6MZQ0 368 aa12.56□□□□□ -0.4
RACK1-234ENST00000515417 CLEC4GQ6UXB4 293 aa12.56□□□□□ -0.4
RACK1-234ENST00000515417 NBPF5PQ86XG9 351 aaPredicted RBP12.56□□□□□ -0.4
RACK1-234ENST00000515417 CNBD1Q8NA66 436 aa12.56□□□□□ -0.4
RACK1-234ENST00000515417 KIAA1551Q9HCM1 1747 aa12.56□□□□□ -0.4
RACK1-234ENST00000515417 ERVV-1B6SEH8 477 aa12.55□□□□□ -0.4
RACK1-234ENST00000515417 NPHP1O15259 732 aa12.55□□□□□ -0.4
RACK1-234ENST00000515417 BCS1LQ9Y276 419 aa12.55□□□□□ -0.4
RACK1-234ENST00000515417 UBN2Q6ZU65 1347 aa12.55□□□□□ -0.4
RACK1-234ENST00000515417 AFDNP55196 1824 aaKnown RBP12.54□□□□□ -0.4
RACK1-234ENST00000515417 KCNA3P22001 575 aa12.54□□□□□ -0.4
RACK1-234ENST00000515417 TGFB2P61812 414 aa12.54□□□□□ -0.4
RACK1-234ENST00000515417 TWISTNBQ3B726 338 aaPredicted RBP12.54□□□□□ -0.4
RACK1-234ENST00000515417 ARHGAP27Q6ZUM4 889 aa12.54□□□□□ -0.4
RACK1-234ENST00000515417 PHAXQ9H814 394 aaKnown RBP12.54□□□□□ -0.4
RACK1-234ENST00000515417 DBF4Q9UBU7 674 aaPredicted RBP12.54□□□□□ -0.4
RACK1-234ENST00000515417 GOLGA2Q08379 1002 aa12.53□□□□□ -0.4
RACK1-234ENST00000515417 GIGYF2Q6Y7W6 1299 aaKnown RBP12.53□□□□□ -0.4
RACK1-234ENST00000515417 NUTM1Q86Y26 1132 aa12.53□□□□□ -0.4
RACK1-234ENST00000515417 C2CD5Q86YS7 1000 aa12.53□□□□□ -0.4
RACK1-234ENST00000515417 CDCA7LQ96GN5 454 aa12.53□□□□□ -0.4
RACK1-234ENST00000515417 MYH16Q9H6N6 1097 aa12.53□□□□□ -0.4
RACK1-234ENST00000515417 HYPKQ9NX55 129 aa12.53□□□□□ -0.4
RACK1-234ENST00000515417 NRXN2Q9P2S2 1712 aa12.53□□□□□ -0.4
RACK1-234ENST00000515417 ABCC12Q96J65 1359 aa12.53□□□□□ -0.4
RACK1-234ENST00000515417 KIF13BQ9NQT8 1826 aa12.53□□□□□ -0.4
RACK1-234ENST00000515417 ST5P78524 1137 aa12.52□□□□□ -0.41
RACK1-234ENST00000515417 CCDC30Q5VVM6 783 aa12.52□□□□□ -0.41
RACK1-234ENST00000515417 SUSD4Q5VX71 490 aa12.52□□□□□ -0.41
RACK1-234ENST00000515417 ZNF34Q8IZ26 560 aa12.52□□□□□ -0.41
RACK1-234ENST00000515417 ERFEQ4G0M1 354 aa12.51□□□□□ -0.41
RACK1-234ENST00000515417 G2E3Q7L622 706 aa12.51□□□□□ -0.41
RACK1-234ENST00000515417 PCNTO95613 3336 aa12.5□□□□□ -0.41
RACK1-234ENST00000515417 ATP5J2-PTCD1G3V325 749 aa12.5□□□□□ -0.41
RACK1-234ENST00000515417 RGL2O15211 777 aa12.5□□□□□ -0.41
RACK1-234ENST00000515417 VAMP4O75379 141 aa12.5□□□□□ -0.41
RACK1-234ENST00000515417 NTSR2O95665 410 aa12.5□□□□□ -0.41
RACK1-234ENST00000515417 GTF2E1P29083 439 aaPredicted RBP12.5□□□□□ -0.41
RACK1-234ENST00000515417 COL13A1Q5TAT6 717 aaPredicted RBP12.5□□□□□ -0.41
RACK1-234ENST00000515417 ANKRD13DQ6ZTN6 518 aa12.5□□□□□ -0.41
RACK1-234ENST00000515417 PLBD2Q8NHP8 589 aa12.5□□□□□ -0.41
RACK1-234ENST00000515417 BRIP1Q9BX63 1249 aa12.5□□□□□ -0.41
RACK1-234ENST00000515417 STK31Q9BXU1 1019 aa12.5□□□□□ -0.41
RACK1-234ENST00000515417 ANKRD31Q8N7Z5 1873 aa12.49□□□□□ -0.41
RACK1-234ENST00000515417 NUP98P52948 1817 aa12.49□□□□□ -0.41
RACK1-234ENST00000515417 H0YIN7 160 aa12.49□□□□□ -0.41
RACK1-234ENST00000515417 CAPN15O75808 1086 aa12.49□□□□□ -0.41
RACK1-234ENST00000515417 TOMM70O94826 608 aa12.49□□□□□ -0.41
RACK1-234ENST00000515417 TCIRG1Q13488 830 aa12.49□□□□□ -0.41
RACK1-234ENST00000515417 DALRD3Q5D0E6 543 aaKnown RBP12.49□□□□□ -0.41
RACK1-234ENST00000515417 TPTE2Q6XPS3 522 aa12.49□□□□□ -0.41
RACK1-234ENST00000515417 C3orf67Q6ZVT6 689 aa12.49□□□□□ -0.41
RACK1-234ENST00000515417 RIC3Q7Z5B4 369 aa12.49□□□□□ -0.41
RACK1-234ENST00000515417 NLRP10Q86W26 655 aa12.49□□□□□ -0.41
RACK1-234ENST00000515417 SYNE4Q8N205 404 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms