RNA–Protein interactions for RNA: ENST00000503842.5

PRDM2-213, Transcript of PR/SET domain 2, humanhuman

TSL 1 (best) BASIC

Gene PRDM2, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-213ENST00000503842 ATF7IPQ6VMQ6 1270 aa17■□□□□ 0.31
PRDM2-213ENST00000503842 RREB1Q92766 1687 aa17■□□□□ 0.31
PRDM2-213ENST00000503842 PLSCR1O15162 318 aa16.99■□□□□ 0.31
PRDM2-213ENST00000503842 PHAXQ9H814 394 aaKnown RBP16.99■□□□□ 0.31
PRDM2-213ENST00000503842 CCNL1Q9UK58 526 aaPredicted RBP16.99■□□□□ 0.31
PRDM2-213ENST00000503842 TNNQ9UQP3 1299 aa16.99■□□□□ 0.31
PRDM2-213ENST00000503842 PYGBP11216 843 aa16.98■□□□□ 0.31
PRDM2-213ENST00000503842 PIP4K2AP48426 406 aaPredicted RBP16.98■□□□□ 0.31
PRDM2-213ENST00000503842 PDE3AQ14432 1141 aa16.98■□□□□ 0.31
PRDM2-213ENST00000503842 C20orf194Q5TEA3 1177 aa16.98■□□□□ 0.31
PRDM2-213ENST00000503842 LINC00116Q8NCU8 138 aa16.98■□□□□ 0.31
PRDM2-213ENST00000503842 API5Q9BZZ5 524 aaKnown RBP16.98■□□□□ 0.31
PRDM2-213ENST00000503842 MYH14Q7Z406 1995 aaKnown RBP16.98■□□□□ 0.31
PRDM2-213ENST00000503842 RGPD3A6NKT7 1758 aaPredicted RBP16.97■□□□□ 0.31
PRDM2-213ENST00000503842 RGPD4Q7Z3J3 1758 aa16.97■□□□□ 0.31
PRDM2-213ENST00000503842 APBA3O96018 575 aa16.97■□□□□ 0.31
PRDM2-213ENST00000503842 MYL6BP14649 208 aa16.97■□□□□ 0.31
PRDM2-213ENST00000503842 SLC27A3Q5K4L6 730 aa16.97■□□□□ 0.31
PRDM2-213ENST00000503842 INTS5Q6P9B9 1019 aaKnown RBP16.97■□□□□ 0.31
PRDM2-213ENST00000503842 CCDC87Q9NVE4 849 aa16.97■□□□□ 0.31
PRDM2-213ENST00000503842 ZBTB1Q9Y2K1 713 aa16.97■□□□□ 0.31
PRDM2-213ENST00000503842 TAF1LQ8IZX4 1826 aa16.97■□□□□ 0.31
PRDM2-213ENST00000503842 ABCC4O15439 1325 aa16.96■□□□□ 0.31
PRDM2-213ENST00000503842 CNTNAP4Q9C0A0 1308 aa16.96■□□□□ 0.31
PRDM2-213ENST00000503842 EP400Q96L91 3159 aa16.96■□□□□ 0.31
PRDM2-213ENST00000503842 MS4A1P11836 297 aa16.96■□□□□ 0.31
PRDM2-213ENST00000503842 RLBP1P12271 317 aa16.96■□□□□ 0.31
PRDM2-213ENST00000503842 CRKLP46109 303 aaKnown RBP16.96■□□□□ 0.31
PRDM2-213ENST00000503842 KCNQ4P56696 695 aa16.96■□□□□ 0.31
PRDM2-213ENST00000503842 DZIP1LQ8IYY4 767 aaKnown RBP16.96■□□□□ 0.31
PRDM2-213ENST00000503842 XAGE3Q8WTP9 111 aa16.96■□□□□ 0.31
PRDM2-213ENST00000503842 LRRC4BQ9NT99 713 aa16.96■□□□□ 0.31
PRDM2-213ENST00000503842 NEFLP07196 543 aa16.95■□□□□ 0.3
PRDM2-213ENST00000503842 FKBP5Q13451 457 aaPredicted RBP16.95■□□□□ 0.3
PRDM2-213ENST00000503842 RC3H1Q5TC82 1133 aaKnown RBP16.95■□□□□ 0.3
PRDM2-213ENST00000503842 PANK1Q8TE04 598 aa16.95■□□□□ 0.3
PRDM2-213ENST00000503842 ADCY9O60503 1353 aa16.94■□□□□ 0.3
PRDM2-213ENST00000503842 IL6STP40189 918 aaPredicted RBP16.94■□□□□ 0.3
PRDM2-213ENST00000503842 IRX6P78412 446 aaPredicted RBP16.94■□□□□ 0.3
PRDM2-213ENST00000503842 TXNRD1Q16881 649 aa16.94■□□□□ 0.3
PRDM2-213ENST00000503842 COPS6Q7L5N1 327 aa16.94■□□□□ 0.3
PRDM2-213ENST00000503842 CLUAP1Q96AJ1 413 aa16.94■□□□□ 0.3
PRDM2-213ENST00000503842 EIF5P55010 431 aaKnown RBP16.93■□□□□ 0.3
PRDM2-213ENST00000503842 FTSJ3Q8IY81 847 aaKnown RBP16.93■□□□□ 0.3
PRDM2-213ENST00000503842 PHF12Q96QT6 1004 aa16.93■□□□□ 0.3
PRDM2-213ENST00000503842 C4BP0C0L5 1744 aa16.93■□□□□ 0.3
PRDM2-213ENST00000503842 F6X3S4 739 aa16.92■□□□□ 0.3
PRDM2-213ENST00000503842 DDX58O95786 925 aaKnown RBP16.92■□□□□ 0.3
PRDM2-213ENST00000503842 KSR2Q6VAB6 950 aa16.92■□□□□ 0.3
PRDM2-213ENST00000503842 TMEM57Q8N5G2 664 aa16.92■□□□□ 0.3
PRDM2-213ENST00000503842 PXDNLA1KZ92 1463 aa16.92■□□□□ 0.3
PRDM2-213ENST00000503842 PI4KAP2A4QPH2 592 aa16.91■□□□□ 0.3
PRDM2-213ENST00000503842 HMGB2P26583 209 aaKnown RBP16.91■□□□□ 0.3
PRDM2-213ENST00000503842 AIMP1Q12904 312 aaKnown RBP16.91■□□□□ 0.3
PRDM2-213ENST00000503842 TTLL7Q6ZT98 887 aa16.91■□□□□ 0.3
PRDM2-213ENST00000503842 PI4KAP1Q8N8J0 262 aa16.91■□□□□ 0.3
PRDM2-213ENST00000503842 CRBNQ96SW2 442 aa16.91■□□□□ 0.3
PRDM2-213ENST00000503842 N4BP2Q86UW6 1770 aaPredicted RBP16.9■□□□□ 0.3
PRDM2-213ENST00000503842 INTS3Q68E01 1043 aaKnown RBP16.9■□□□□ 0.3
PRDM2-213ENST00000503842 ANKRD13DQ6ZTN6 518 aa16.9■□□□□ 0.3
PRDM2-213ENST00000503842 ZNF579Q8NAF0 562 aaKnown RBP16.9■□□□□ 0.3
PRDM2-213ENST00000503842 DNAAF4Q8WXU2 420 aa16.9■□□□□ 0.3
PRDM2-213ENST00000503842 CAMKK2Q96RR4 588 aa16.9■□□□□ 0.3
PRDM2-213ENST00000503842 COG6Q9Y2V7 657 aa16.9■□□□□ 0.3
PRDM2-213ENST00000503842 RPS6KA4O75676 772 aa16.89■□□□□ 0.29
PRDM2-213ENST00000503842 EVX2Q03828 476 aa16.89■□□□□ 0.29
PRDM2-213ENST00000503842 MVPQ14764 893 aaKnown RBP16.89■□□□□ 0.29
PRDM2-213ENST00000503842 CCDC125Q86Z20 511 aa16.89■□□□□ 0.29
PRDM2-213ENST00000503842 PLBD2Q8NHP8 589 aa16.89■□□□□ 0.29
PRDM2-213ENST00000503842 MAP3K2Q9Y2U5 619 aa16.89■□□□□ 0.29
PRDM2-213ENST00000503842 NUP188Q5SRE5 1749 aa16.89■□□□□ 0.29
PRDM2-213ENST00000503842 ATP10DQ9P241 1426 aa16.88■□□□□ 0.29
PRDM2-213ENST00000503842 CCT4P50991 539 aaKnown RBP16.88■□□□□ 0.29
PRDM2-213ENST00000503842 SF3B2Q13435 895 aaKnown RBP16.88■□□□□ 0.29
PRDM2-213ENST00000503842 EXOC6Q8TAG9 804 aa16.88■□□□□ 0.29
PRDM2-213ENST00000503842 ZNF330Q9Y3S2 320 aaPredicted RBP16.88■□□□□ 0.29
PRDM2-213ENST00000503842 COL15A1P39059 1388 aa16.88■□□□□ 0.29
PRDM2-213ENST00000503842 ARFGEF2Q9Y6D5 1785 aa16.87■□□□□ 0.29
PRDM2-213ENST00000503842 GNPATO15228 680 aa16.87■□□□□ 0.29
PRDM2-213ENST00000503842 BAG6P46379 1132 aa16.87■□□□□ 0.29
PRDM2-213ENST00000503842 EN1Q05925 392 aaPredicted RBP16.87■□□□□ 0.29
PRDM2-213ENST00000503842 ERICH6BQ5W0A0 696 aa16.87■□□□□ 0.29
PRDM2-213ENST00000503842 SLC4A10Q6U841 1118 aa16.87■□□□□ 0.29
PRDM2-213ENST00000503842 KIF6Q6ZMV9 814 aa16.87■□□□□ 0.29
PRDM2-213ENST00000503842 RIC3Q7Z5B4 369 aa16.87■□□□□ 0.29
PRDM2-213ENST00000503842 ITPRIPQ8IWB1 547 aa16.87■□□□□ 0.29
PRDM2-213ENST00000503842 METTL22Q9BUU2 404 aaPredicted RBP16.87■□□□□ 0.29
PRDM2-213ENST00000503842 MAP3K15Q6ZN16 1313 aa16.87■□□□□ 0.29
PRDM2-213ENST00000503842 UBR3Q6ZT12 1888 aa16.86■□□□□ 0.29
PRDM2-213ENST00000503842 A0A087WZG4 1122 aa16.86■□□□□ 0.29
PRDM2-213ENST00000503842 EZH2Q15910 746 aaKnown RBP16.86■□□□□ 0.29
PRDM2-213ENST00000503842 BEND3Q5T5X7 828 aa16.86■□□□□ 0.29
PRDM2-213ENST00000503842 AMIGO3Q86WK7 504 aa16.86■□□□□ 0.29
PRDM2-213ENST00000503842 DZIP3Q86Y13 1208 aaKnown RBP16.86■□□□□ 0.29
PRDM2-213ENST00000503842 AK7Q96M32 723 aa16.86■□□□□ 0.29
PRDM2-213ENST00000503842 ERVV-1B6SEH8 477 aa16.85■□□□□ 0.29
PRDM2-213ENST00000503842 DEFB132Q7Z7B7 95 aa16.85■□□□□ 0.29
PRDM2-213ENST00000503842 NPM2Q86SE8 214 aaKnown RBP16.85■□□□□ 0.29
PRDM2-213ENST00000503842 ZBTB3Q9H5J0 574 aa16.85■□□□□ 0.29
PRDM2-213ENST00000503842 DDX19BQ9UMR2 479 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms