RNA–Protein interactions for RNA: ENST00000502865.5

SFXN1-204, Transcript of sideroflexin 1, humanhuman

TSL 5

Gene SFXN1, Length 641 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-204ENST00000502865 ANKRD13DQ6ZTN6 518 aa12.32□□□□□ -0.44
SFXN1-204ENST00000502865 RIC3Q7Z5B4 369 aa12.32□□□□□ -0.44
SFXN1-204ENST00000502865 LINC00116Q8NCU8 138 aa12.32□□□□□ -0.44
SFXN1-204ENST00000502865 MEIS3Q99687 375 aa12.32□□□□□ -0.44
SFXN1-204ENST00000502865 C1orf115Q9H7X2 142 aa12.32□□□□□ -0.44
SFXN1-204ENST00000502865 ARFGEF2Q9Y6D5 1785 aa12.32□□□□□ -0.44
SFXN1-204ENST00000502865 NUP188Q5SRE5 1749 aa12.31□□□□□ -0.44
SFXN1-204ENST00000502865 ATP10DQ9P241 1426 aa12.31□□□□□ -0.44
SFXN1-204ENST00000502865 IGHDP01880 384 aa12.31□□□□□ -0.44
SFXN1-204ENST00000502865 CRKLP46109 303 aaKnown RBP12.31□□□□□ -0.44
SFXN1-204ENST00000502865 AAMPQ13685 434 aa12.31□□□□□ -0.44
SFXN1-204ENST00000502865 SRCIN1Q9C0H9 1055 aa12.31□□□□□ -0.44
SFXN1-204ENST00000502865 TAF1LQ8IZX4 1826 aa12.3□□□□□ -0.44
SFXN1-204ENST00000502865 CWF19L2Q2TBE0 894 aaKnown RBP12.3□□□□□ -0.44
SFXN1-204ENST00000502865 PLBD2Q8NHP8 589 aa12.3□□□□□ -0.44
SFXN1-204ENST00000502865 MYD88Q99836 296 aa12.3□□□□□ -0.44
SFXN1-204ENST00000502865 METTL22Q9BUU2 404 aaPredicted RBP12.3□□□□□ -0.44
SFXN1-204ENST00000502865 USP44Q9H0E7 712 aa12.3□□□□□ -0.44
SFXN1-204ENST00000502865 CCDC87Q9NVE4 849 aa12.3□□□□□ -0.44
SFXN1-204ENST00000502865 RNF216Q9NWF9 866 aaPredicted RBP12.3□□□□□ -0.44
SFXN1-204ENST00000502865 ZNF330Q9Y3S2 320 aaPredicted RBP12.3□□□□□ -0.44
SFXN1-204ENST00000502865 IGKV5-2P06315 115 aa12.29□□□□□ -0.44
SFXN1-204ENST00000502865 IL6STP40189 918 aaPredicted RBP12.29□□□□□ -0.44
SFXN1-204ENST00000502865 EIF5P55010 431 aaKnown RBP12.29□□□□□ -0.44
SFXN1-204ENST00000502865 RNF39Q9H2S5 420 aa12.29□□□□□ -0.44
SFXN1-204ENST00000502865 ZBTB3Q9H5J0 574 aa12.29□□□□□ -0.44
SFXN1-204ENST00000502865 CCNL1Q9UK58 526 aaPredicted RBP12.29□□□□□ -0.44
SFXN1-204ENST00000502865 KDM2BQ8NHM5 1336 aa12.29□□□□□ -0.44
SFXN1-204ENST00000502865 ALDH1L1O75891 902 aa12.28□□□□□ -0.44
SFXN1-204ENST00000502865 SMIM5Q71RC9 77 aa12.28□□□□□ -0.44
SFXN1-204ENST00000502865 SIRT2Q8IXJ6 389 aa12.28□□□□□ -0.44
SFXN1-204ENST00000502865 LINS1Q8NG48 757 aa12.28□□□□□ -0.44
SFXN1-204ENST00000502865 CHMP4BQ9H444 224 aaKnown RBP12.28□□□□□ -0.44
SFXN1-204ENST00000502865 LRRC4BQ9NT99 713 aa12.28□□□□□ -0.44
SFXN1-204ENST00000502865 AFDNP55196 1824 aaKnown RBP12.27□□□□□ -0.44
SFXN1-204ENST00000502865 NEURL1BA8MQ27 555 aa12.27□□□□□ -0.45
SFXN1-204ENST00000502865 ATP5J2-PTCD1G3V325 749 aa12.27□□□□□ -0.45
SFXN1-204ENST00000502865 NBPF7P0C2Y1 421 aaPredicted RBP12.27□□□□□ -0.45
SFXN1-204ENST00000502865 PROM2Q8N271 834 aa12.27□□□□□ -0.45
SFXN1-204ENST00000502865 TBC1D2BQ9UPU7 963 aa12.27□□□□□ -0.45
SFXN1-204ENST00000502865 TNS1Q9HBL0 1735 aaKnown RBP12.26□□□□□ -0.45
SFXN1-204ENST00000502865 HLFQ16534 295 aa12.26□□□□□ -0.45
SFXN1-204ENST00000502865 RC3H1Q5TC82 1133 aaKnown RBP12.26□□□□□ -0.45
SFXN1-204ENST00000502865 ARXQ96QS3 562 aa12.26□□□□□ -0.45
SFXN1-204ENST00000502865 MAP3K15Q6ZN16 1313 aa12.26□□□□□ -0.45
SFXN1-204ENST00000502865 CNTNAP4Q9C0A0 1308 aa12.26□□□□□ -0.45
SFXN1-204ENST00000502865 NUP98P52948 1817 aa12.25□□□□□ -0.45
SFXN1-204ENST00000502865 GNAI3P08754 354 aa12.25□□□□□ -0.45
SFXN1-204ENST00000502865 NEXNQ0ZGT2 675 aa12.25□□□□□ -0.45
SFXN1-204ENST00000502865 HDAC1Q13547 482 aaPredicted RBP12.25□□□□□ -0.45
SFXN1-204ENST00000502865 GCKRQ14397 625 aa12.25□□□□□ -0.45
SFXN1-204ENST00000502865 CEP85Q6P2H3 762 aa12.25□□□□□ -0.45
SFXN1-204ENST00000502865 KIF6Q6ZMV9 814 aa12.25□□□□□ -0.45
SFXN1-204ENST00000502865 AMIGO3Q86WK7 504 aa12.25□□□□□ -0.45
SFXN1-204ENST00000502865 DZIP3Q86Y13 1208 aaKnown RBP12.25□□□□□ -0.45
SFXN1-204ENST00000502865 JARID2Q92833 1246 aaPredicted RBP12.25□□□□□ -0.45
SFXN1-204ENST00000502865 ISCA1Q9BUE6 129 aa12.25□□□□□ -0.45
SFXN1-204ENST00000502865 C4BP0C0L5 1744 aa12.25□□□□□ -0.45
SFXN1-204ENST00000502865 UTYO14607 1347 aa12.24□□□□□ -0.45
SFXN1-204ENST00000502865 RPS6KA4O75676 772 aa12.24□□□□□ -0.45
SFXN1-204ENST00000502865 APBA3O96018 575 aa12.24□□□□□ -0.45
SFXN1-204ENST00000502865 GNAI2P04899 355 aa12.24□□□□□ -0.45
SFXN1-204ENST00000502865 UBTFL1P0CB47 393 aaPredicted RBP12.24□□□□□ -0.45
SFXN1-204ENST00000502865 TCIRG1Q13488 830 aa12.24□□□□□ -0.45
SFXN1-204ENST00000502865 TXNRD1Q16881 649 aa12.24□□□□□ -0.45
SFXN1-204ENST00000502865 CENPQQ7L2Z9 268 aaPredicted RBP12.24□□□□□ -0.45
SFXN1-204ENST00000502865 SKAP1Q86WV1 359 aa12.24□□□□□ -0.45
SFXN1-204ENST00000502865 ANKRD44Q8N8A2 993 aa12.24□□□□□ -0.45
SFXN1-204ENST00000502865 RWDD1Q9H446 243 aaPredicted RBP12.24□□□□□ -0.45
SFXN1-204ENST00000502865 LRRFIP2Q9Y608 721 aaKnown RBP12.24□□□□□ -0.45
SFXN1-204ENST00000502865 COL15A1P39059 1388 aa12.23□□□□□ -0.45
SFXN1-204ENST00000502865 IBTKQ9P2D0 1353 aaPredicted RBP12.23□□□□□ -0.45
SFXN1-204ENST00000502865 ERVV-1B6SEH8 477 aa12.23□□□□□ -0.45
SFXN1-204ENST00000502865 GRM8O00222 908 aa12.23□□□□□ -0.45
SFXN1-204ENST00000502865 PLSCR1O15162 318 aa12.23□□□□□ -0.45
SFXN1-204ENST00000502865 CAMTA2O94983 1202 aa12.23□□□□□ -0.45
SFXN1-204ENST00000502865 IFFO2Q5TF58 517 aa12.23□□□□□ -0.45
SFXN1-204ENST00000502865 GIGYF2Q6Y7W6 1299 aaKnown RBP12.23□□□□□ -0.45
SFXN1-204ENST00000502865 KAZALD1Q96I82 304 aa12.23□□□□□ -0.45
SFXN1-204ENST00000502865 C9orf78Q9NZ63 289 aaPredicted RBP12.23□□□□□ -0.45
SFXN1-204ENST00000502865 ANKRD36CQ5JPF3 1778 aa12.23□□□□□ -0.45
SFXN1-204ENST00000502865 GNPATO15228 680 aa12.22□□□□□ -0.45
SFXN1-204ENST00000502865 CASP7P55210 303 aa12.22□□□□□ -0.45
SFXN1-204ENST00000502865 ATP8B2P98198 1209 aa12.22□□□□□ -0.45
SFXN1-204ENST00000502865 SLC27A3Q5K4L6 730 aa12.22□□□□□ -0.45
SFXN1-204ENST00000502865 RPAP2Q8IXW5 612 aaPredicted RBP12.22□□□□□ -0.45
SFXN1-204ENST00000502865 SUCLG2Q96I99 432 aa12.22□□□□□ -0.45
SFXN1-204ENST00000502865 BCORQ6W2J9 1755 aa12.22□□□□□ -0.45
SFXN1-204ENST00000502865 H7C1W4 665 aa12.21□□□□□ -0.45
SFXN1-204ENST00000502865 GPTP24298 496 aa12.21□□□□□ -0.45
SFXN1-204ENST00000502865 TRIM28Q13263 835 aaKnown RBP12.21□□□□□ -0.45
SFXN1-204ENST00000502865 NPM2Q86SE8 214 aaKnown RBP12.21□□□□□ -0.45
SFXN1-204ENST00000502865 ZNF34Q8IZ26 560 aa12.21□□□□□ -0.45
SFXN1-204ENST00000502865 CWC25Q9NXE8 425 aaPredicted RBP12.21□□□□□ -0.45
SFXN1-204ENST00000502865 UBR3Q6ZT12 1888 aa12.21□□□□□ -0.46
SFXN1-204ENST00000502865 A0A087WZG4 1122 aa12.2□□□□□ -0.46
SFXN1-204ENST00000502865 PNMA6EA0A0J9YXQ4 647 aa12.2□□□□□ -0.46
SFXN1-204ENST00000502865 EPHA10Q5JZY3 1008 aa12.2□□□□□ -0.46
SFXN1-204ENST00000502865 SMC5Q8IY18 1101 aa12.2□□□□□ -0.46
SFXN1-204ENST00000502865 CCDC191Q8NCU4 936 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms