RNA–Protein interactions for RNA: ENST00000499732.2

NEAT1-201, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 2 BASIC

Gene NEAT1, Length 1,811 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-201ENST00000499732 PXDNLA1KZ92 1463 aa17.83■□□□□ 0.44
NEAT1-201ENST00000499732 C5P01031 1676 aa17.83■□□□□ 0.44
NEAT1-201ENST00000499732 TOGARAM1Q9Y4F4 1720 aa17.83■□□□□ 0.44
NEAT1-201ENST00000499732 CD2BP2O95400 341 aaKnown RBP17.82■□□□□ 0.44
NEAT1-201ENST00000499732 APBA3O96018 575 aa17.82■□□□□ 0.44
NEAT1-201ENST00000499732 RABEP1Q15276 862 aa17.82■□□□□ 0.44
NEAT1-201ENST00000499732 UBE2Q2Q8WVN8 375 aa17.82■□□□□ 0.44
NEAT1-201ENST00000499732 ATP10DQ9P241 1426 aa17.82■□□□□ 0.44
NEAT1-201ENST00000499732 PSDA5PKW4 1024 aaPredicted RBP17.82■□□□□ 0.44
NEAT1-201ENST00000499732 GIGYF1O75420 1035 aaPredicted RBP17.82■□□□□ 0.44
NEAT1-201ENST00000499732 EIF2S2P20042 333 aaKnown RBP17.82■□□□□ 0.44
NEAT1-201ENST00000499732 CCT4P50991 539 aaKnown RBP17.82■□□□□ 0.44
NEAT1-201ENST00000499732 FKBP5Q13451 457 aaPredicted RBP17.82■□□□□ 0.44
NEAT1-201ENST00000499732 ZNF790Q6PG37 636 aa17.82■□□□□ 0.44
NEAT1-201ENST00000499732 DCTPP1Q9H773 170 aa17.82■□□□□ 0.44
NEAT1-201ENST00000499732 DDB1Q16531 1140 aa17.81■□□□□ 0.44
NEAT1-201ENST00000499732 GSPT1P15170 499 aaKnown RBP17.8■□□□□ 0.44
NEAT1-201ENST00000499732 EZH2Q15910 746 aaKnown RBP17.8■□□□□ 0.44
NEAT1-201ENST00000499732 SLC4A10Q6U841 1118 aa17.8■□□□□ 0.44
NEAT1-201ENST00000499732 CAMKK2Q96RR4 588 aa17.8■□□□□ 0.44
NEAT1-201ENST00000499732 MEIS3Q99687 375 aa17.8■□□□□ 0.44
NEAT1-201ENST00000499732 PHAXQ9H814 394 aaKnown RBP17.8■□□□□ 0.44
NEAT1-201ENST00000499732 CHPF2Q9P2E5 772 aa17.8■□□□□ 0.44
NEAT1-201ENST00000499732 ESPNB1AK53 854 aa17.79■□□□□ 0.44
NEAT1-201ENST00000499732 TTC22Q5TAA0 569 aa17.79■□□□□ 0.44
NEAT1-201ENST00000499732 PLEKHM2Q8IWE5 1019 aa17.79■□□□□ 0.44
NEAT1-201ENST00000499732 KAT6BQ8WYB5 2073 aa17.79■□□□□ 0.44
NEAT1-201ENST00000499732 TRIM44Q96DX7 344 aaPredicted RBP17.79■□□□□ 0.44
NEAT1-201ENST00000499732 SLC39A6Q13433 755 aa17.78■□□□□ 0.44
NEAT1-201ENST00000499732 R3HDM1Q15032 1099 aaKnown RBP17.78■□□□□ 0.44
NEAT1-201ENST00000499732 KLHL40Q2TBA0 621 aa17.78■□□□□ 0.44
NEAT1-201ENST00000499732 TTC5Q8N0Z6 440 aa17.78■□□□□ 0.44
NEAT1-201ENST00000499732 AK9Q5TCS8 1911 aa17.78■□□□□ 0.44
NEAT1-201ENST00000499732 PRAMEF22A3QJZ6 481 aa17.77■□□□□ 0.44
NEAT1-201ENST00000499732 GAS2L3Q86XJ1 694 aa17.77■□□□□ 0.44
NEAT1-201ENST00000499732 NUCB2P80303 420 aa17.77■□□□□ 0.43
NEAT1-201ENST00000499732 NBPF14Q5TI25 921 aa17.77■□□□□ 0.43
NEAT1-201ENST00000499732 RPAP2Q8IXW5 612 aaPredicted RBP17.77■□□□□ 0.43
NEAT1-201ENST00000499732 ANKRD44Q8N8A2 993 aa17.77■□□□□ 0.43
NEAT1-201ENST00000499732 RBM42Q9BTD8 480 aaKnown RBP17.77■□□□□ 0.43
NEAT1-201ENST00000499732 DOT1LQ8TEK3 1739 aa17.76■□□□□ 0.43
NEAT1-201ENST00000499732 ITGB4P16144 1822 aa17.76■□□□□ 0.43
NEAT1-201ENST00000499732 SSFA2P28290 1259 aa17.76■□□□□ 0.43
NEAT1-201ENST00000499732 CCDC173Q0VFZ6 552 aa17.76■□□□□ 0.43
NEAT1-201ENST00000499732 CEP85Q6P2H3 762 aa17.76■□□□□ 0.43
NEAT1-201ENST00000499732 NAP1L5Q96NT1 182 aaPredicted RBP17.76■□□□□ 0.43
NEAT1-201ENST00000499732 DBF4Q9UBU7 674 aaPredicted RBP17.76■□□□□ 0.43
NEAT1-201ENST00000499732 LRP5O75197 1615 aa17.75■□□□□ 0.43
NEAT1-201ENST00000499732 BAG4O95429 457 aaKnown RBP17.75■□□□□ 0.43
NEAT1-201ENST00000499732 FMNL2Q96PY5 1086 aa17.75■□□□□ 0.43
NEAT1-201ENST00000499732 TMOD3Q9NYL9 352 aa17.75■□□□□ 0.43
NEAT1-201ENST00000499732 PAPPAQ13219 1627 aa17.75■□□□□ 0.43
NEAT1-201ENST00000499732 ANXA1P04083 346 aa17.75■□□□□ 0.43
NEAT1-201ENST00000499732 UBR2Q8IWV8 1755 aa17.74■□□□□ 0.43
NEAT1-201ENST00000499732 LAMB4A4D0S4 1761 aa17.74■□□□□ 0.43
NEAT1-201ENST00000499732 CASC1Q6TDU7 716 aa17.74■□□□□ 0.43
NEAT1-201ENST00000499732 ZNF496Q96IT1 587 aaPredicted RBP17.74■□□□□ 0.43
NEAT1-201ENST00000499732 FOXD4L1Q9NU39 408 aa17.74■□□□□ 0.43
NEAT1-201ENST00000499732 TNS1Q9HBL0 1735 aaKnown RBP17.73■□□□□ 0.43
NEAT1-201ENST00000499732 TUBGCP6Q96RT7 1819 aa17.73■□□□□ 0.43
NEAT1-201ENST00000499732 CYP2E1P05181 493 aaPredicted RBP17.73■□□□□ 0.43
NEAT1-201ENST00000499732 PROSER3Q2NL68 480 aa17.73■□□□□ 0.43
NEAT1-201ENST00000499732 MARCH10Q8NA82 808 aaPredicted RBP17.73■□□□□ 0.43
NEAT1-201ENST00000499732 PPP1R9BQ96SB3 815 aa17.73■□□□□ 0.43
NEAT1-201ENST00000499732 USP26Q9BXU7 913 aa17.73■□□□□ 0.43
NEAT1-201ENST00000499732 CWC22Q9HCG8 908 aaKnown RBP17.73■□□□□ 0.43
NEAT1-201ENST00000499732 ADCY9O60503 1353 aa17.72■□□□□ 0.43
NEAT1-201ENST00000499732 SNRPA1P09661 255 aaKnown RBP17.72■□□□□ 0.43
NEAT1-201ENST00000499732 ERBB4Q15303 1308 aa17.72■□□□□ 0.43
NEAT1-201ENST00000499732 ZNF445P59923 1031 aa17.71■□□□□ 0.43
NEAT1-201ENST00000499732 PIGBQ92521 554 aa17.71■□□□□ 0.43
NEAT1-201ENST00000499732 DDX49Q9Y6V7 483 aaKnown RBP17.71■□□□□ 0.43
NEAT1-201ENST00000499732 PI4KAP2A4QPH2 592 aa17.7■□□□□ 0.42
NEAT1-201ENST00000499732 ST18O60284 1047 aa17.7■□□□□ 0.42
NEAT1-201ENST00000499732 GNAI2P04899 355 aa17.7■□□□□ 0.42
NEAT1-201ENST00000499732 GNAI3P08754 354 aa17.7■□□□□ 0.42
NEAT1-201ENST00000499732 NASPP49321 788 aaPredicted RBP17.7■□□□□ 0.42
NEAT1-201ENST00000499732 PDIA6Q15084 440 aa17.7■□□□□ 0.42
NEAT1-201ENST00000499732 PI4KAP1Q8N8J0 262 aa17.7■□□□□ 0.42
NEAT1-201ENST00000499732 DNAAF4Q8WXU2 420 aa17.7■□□□□ 0.42
NEAT1-201ENST00000499732 ANP32BQ92688 251 aaKnown RBP17.7■□□□□ 0.42
NEAT1-201ENST00000499732 DDX21Q9NR30 783 aaKnown RBP eCLIP17.7■□□□□ 0.42
NEAT1-201ENST00000499732 BCL9O00512 1426 aa17.7■□□□□ 0.42
NEAT1-201ENST00000499732 HYPKQ9NX55 129 aa17.7■□□□□ 0.42
NEAT1-201ENST00000499732 BEND3Q5T5X7 828 aa17.69■□□□□ 0.42
NEAT1-201ENST00000499732 SRCIN1Q9C0H9 1055 aa17.69■□□□□ 0.42
NEAT1-201ENST00000499732 BCL11BQ9C0K0 894 aaPredicted RBP17.69■□□□□ 0.42
NEAT1-201ENST00000499732 USP44Q9H0E7 712 aa17.69■□□□□ 0.42
NEAT1-201ENST00000499732 KCPQ6ZWJ8 1503 aa17.69■□□□□ 0.42
NEAT1-201ENST00000499732 PLSCR1O15162 318 aa17.68■□□□□ 0.42
NEAT1-201ENST00000499732 REC8O95072 547 aa17.68■□□□□ 0.42
NEAT1-201ENST00000499732 SYTL4Q96C24 671 aaPredicted RBP17.68■□□□□ 0.42
NEAT1-201ENST00000499732 SDSP20132 328 aa17.67■□□□□ 0.42
NEAT1-201ENST00000499732 PRIM1P49642 420 aaKnown RBP17.67■□□□□ 0.42
NEAT1-201ENST00000499732 HMMRO75330 724 aa17.66■□□□□ 0.42
NEAT1-201ENST00000499732 KSR2Q6VAB6 950 aa17.66■□□□□ 0.42
NEAT1-201ENST00000499732 VSIG10Q8N0Z9 540 aa17.66■□□□□ 0.42
NEAT1-201ENST00000499732 ACSBG1Q96GR2 724 aa17.66■□□□□ 0.42
NEAT1-201ENST00000499732 OSBPL3Q9H4L5 887 aa17.66■□□□□ 0.42
NEAT1-201ENST00000499732 ATG3Q9NT62 314 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms