RNA–Protein interactions for RNA: ENST00000499732.2

NEAT1-201, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 2 BASIC

Gene NEAT1, Length 1,811 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-201ENST00000499732 TIA1P31483 386 aaKnown RBP eCLIP13.8□□□□□ -0.25e-57■■■■■ 56.4
NEAT1-201ENST00000499732 TARDBPQ13148 414 aaKnown RBP eCLIP13.62□□□□□ -0.234e-17■■■■□ 25.6
NEAT1-201ENST00000499732 PRPF4O43172 522 aaKnown RBP eCLIP15.27■□□□□ 0.048e-50■■■□□ 17.5
NEAT1-201ENST00000499732 GTF2F1P35269 517 aaKnown RBP eCLIP17.19■□□□□ 0.344e-60■■■□□ 17.4
NEAT1-201ENST00000499732 ZRANB2O95218 330 aaKnown RBP eCLIP16.51■□□□□ 0.235e-24■■■□□ 17
NEAT1-201ENST00000499732 CDC40O60508 579 aaKnown RBP eCLIP13.06□□□□□ -0.327e-32■■■□□ 16.9
NEAT1-201ENST00000499732 PCBP2Q15366 365 aaKnown RBP eCLIP14.17□□□□□ -0.141e-323■■■□□ 16.3
NEAT1-201ENST00000499732 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.15■□□□□ 0.021e-11■■■□□ 15.6
NEAT1-201ENST00000499732 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.2■□□□□ 0.021e-323■■□□□ 14.3
NEAT1-201ENST00000499732 DDX6P26196 483 aaKnown RBP eCLIP14.34□□□□□ -0.115e-76■■□□□ 13.8
NEAT1-201ENST00000499732 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.29■□□□□ 0.048e-16■■□□□ 13.5
NEAT1-201ENST00000499732 RBFOX2O43251 390 aaKnown RBP eCLIP11.95□□□□□ -0.55e-26■■□□□ 12.7
NEAT1-201ENST00000499732 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.76■□□□□ 0.113e-35■■□□□ 12.6
NEAT1-201ENST00000499732 HNRNPMP52272 730 aaKnown RBP eCLIP20.73■□□□□ 0.911e-56■■□□□ 12.6
NEAT1-201ENST00000499732 FUSP35637 526 aaKnown RBP eCLIP9.35□□□□□ -0.915e-18■■□□□ 12.1
NEAT1-201ENST00000499732 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.41□□□□□ -0.11e-8■■□□□ 12
NEAT1-201ENST00000499732 AARSP49588 968 aaKnown RBP eCLIP16.15■□□□□ 0.184e-80■■□□□ 11.9
NEAT1-201ENST00000499732 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.44□□□□□ -0.267e-42■■□□□ 11.8
NEAT1-201ENST00000499732 EWSR1Q01844 656 aaKnown RBP eCLIP12.47□□□□□ -0.414e-34■■□□□ 11.7
NEAT1-201ENST00000499732 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.87■□□□□ 0.136e-12■■□□□ 11.5
NEAT1-201ENST00000499732 SRSF1Q07955 248 aaKnown RBP eCLIP12.18□□□□□ -0.467e-22■■□□□ 11.4
NEAT1-201ENST00000499732 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.26■□□□□ 0.993e-43■□□□□ 11.1
NEAT1-201ENST00000499732 U2AF2P26368 475 aaKnown RBP eCLIP16.82■□□□□ 0.281e-323■□□□□ 11
NEAT1-201ENST00000499732 U2AF1Q01081 240 aaKnown RBP eCLIP18.66■□□□□ 0.584e-43■□□□□ 10.7
NEAT1-201ENST00000499732 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.43□□□□□ -0.16e-54■□□□□ 10.5
NEAT1-201ENST00000499732 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.56■□□□□ 0.241e-323■□□□□ 10.2
NEAT1-201ENST00000499732 TAF15Q92804 592 aaKnown RBP eCLIP12.19□□□□□ -0.463e-24■□□□□ 10
NEAT1-201ENST00000499732 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.78□□□□□ -0.041e-323■□□□□ 9.7
NEAT1-201ENST00000499732 FUBP3Q96I24 572 aaKnown RBP eCLIP14.66□□□□□ -0.066e-43■□□□□ 9.7
NEAT1-201ENST00000499732 HLTFQ14527 1009 aaKnown RBP eCLIP15.72■□□□□ 0.117e-6■□□□□ 9.7
NEAT1-201ENST00000499732 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.57□□□□□ -0.084e-26■□□□□ 9.6
NEAT1-201ENST00000499732 HNRNPCP07910 306 aaKnown RBP eCLIP14.34□□□□□ -0.111e-323■□□□□ 9.5
NEAT1-201ENST00000499732 RBM15Q96T37 977 aaKnown RBP eCLIP15.24■□□□□ 0.031e-22■□□□□ 9.5
NEAT1-201ENST00000499732 SFPQP23246 707 aaKnown RBP eCLIP16.68■□□□□ 0.267e-82■□□□□ 9.4
NEAT1-201ENST00000499732 NCBP2P52298 156 aaKnown RBP eCLIP13.49□□□□□ -0.252e-27■□□□□ 9.4
NEAT1-201ENST00000499732 HNRNPUQ00839 825 aaKnown RBP eCLIP19.94■□□□□ 0.784e-59■□□□□ 9.3
NEAT1-201ENST00000499732 BCCIPQ9P287 314 aaKnown RBP eCLIP15.61■□□□□ 0.094e-48■□□□□ 8.9
NEAT1-201ENST00000499732 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.06■□□□□ 01e-323■□□□□ 8.9
NEAT1-201ENST00000499732 SRSF9Q13242 221 aaKnown RBP eCLIP10.8□□□□□ -0.684e-33■□□□□ 8.8
NEAT1-201ENST00000499732 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.73□□□□□ -0.056e-26■□□□□ 8.6
NEAT1-201ENST00000499732 SRSF7Q16629 238 aaKnown RBP eCLIP12.43□□□□□ -0.422e-10■□□□□ 8.6
NEAT1-201ENST00000499732 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.8■□□□□ 0.122e-6■□□□□ 8.6
NEAT1-201ENST00000499732 NONOQ15233 471 aaKnown RBP eCLIP16.1■□□□□ 0.171e-26■□□□□ 8.4
NEAT1-201ENST00000499732 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.72■□□□□ 0.111e-323■□□□□ 8.4
NEAT1-201ENST00000499732 RBM5P52756 815 aaKnown RBP eCLIP16.42■□□□□ 0.221e-323■□□□□ 8.3
NEAT1-201ENST00000499732 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.74□□□□□ -0.376e-55■□□□□ 8.3
NEAT1-201ENST00000499732 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.6■□□□□ 0.254e-33■□□□□ 8.2
NEAT1-201ENST00000499732 AQRO60306 1485 aaKnown RBP eCLIP22.65■■□□□ 1.224e-14■□□□□ 8.2
NEAT1-201ENST00000499732 NIPBLQ6KC79 2804 aaeCLIP11.35□□□□□ -0.591e-29■□□□□ 8
Retrieved 49 of 49 RNA–protein pairs in 23.2 ms