RNA–Protein interactions for RNA: ENST00000497107.1

ITGA6-211, Transcript of integrin subunit alpha 6, humanhuman

TSL 2

Gene ITGA6, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-211ENST00000497107 AGBL1Q96MI9 1066 aa8.59□□□□□ -1.03
ITGA6-211ENST00000497107 FANCAO15360 1455 aa8.58□□□□□ -1.04
ITGA6-211ENST00000497107 UHRF1BP1Q6BDS2 1440 aa8.58□□□□□ -1.04
ITGA6-211ENST00000497107 SKIP12755 728 aa8.58□□□□□ -1.04
ITGA6-211ENST00000497107 OXLD1Q5BKU9 147 aa8.58□□□□□ -1.04
ITGA6-211ENST00000497107 CNTNAP3BQ96NU0 1288 aa8.58□□□□□ -1.04
ITGA6-211ENST00000497107 CDCA7Q9BWT1 371 aaPredicted RBP8.58□□□□□ -1.04
ITGA6-211ENST00000497107 CNTNAP3Q9BZ76 1288 aa8.58□□□□□ -1.04
ITGA6-211ENST00000497107 OSBPL3Q9H4L5 887 aa8.58□□□□□ -1.04
ITGA6-211ENST00000497107 DNMT3AQ9Y6K1 912 aaPredicted RBP8.58□□□□□ -1.04
ITGA6-211ENST00000497107 IQGAP3Q86VI3 1631 aa8.58□□□□□ -1.04
ITGA6-211ENST00000497107 PIK3CDO00329 1044 aa8.57□□□□□ -1.04
ITGA6-211ENST00000497107 ZNF385CQ66K41 422 aaPredicted RBP8.57□□□□□ -1.04
ITGA6-211ENST00000497107 AFAP1Q8N556 730 aa8.57□□□□□ -1.04
ITGA6-211ENST00000497107 CALR3Q96L12 384 aaKnown RBP8.57□□□□□ -1.04
ITGA6-211ENST00000497107 SOS2Q07890 1332 aaPredicted RBP8.56□□□□□ -1.04
ITGA6-211ENST00000497107 CCDC144AA2RUR9 1427 aa8.56□□□□□ -1.04
ITGA6-211ENST00000497107 SCAPERQ9BY12 1400 aa8.56□□□□□ -1.04
ITGA6-211ENST00000497107 TTLL8A6PVC2 850 aa8.56□□□□□ -1.04
ITGA6-211ENST00000497107 IGHA1P01876 353 aa8.56□□□□□ -1.04
ITGA6-211ENST00000497107 EML3Q32P44 896 aa8.56□□□□□ -1.04
ITGA6-211ENST00000497107 TSGA10IPQ3SY00 556 aa8.56□□□□□ -1.04
ITGA6-211ENST00000497107 ZNF326Q5BKZ1 582 aaKnown RBP8.56□□□□□ -1.04
ITGA6-211ENST00000497107 XP32Q5T750 250 aa8.56□□□□□ -1.04
ITGA6-211ENST00000497107 GPAT2Q6NUI2 795 aa8.56□□□□□ -1.04
ITGA6-211ENST00000497107 KDF1Q8NAX2 398 aaPredicted RBP8.56□□□□□ -1.04
ITGA6-211ENST00000497107 ZNF395Q9H8N7 513 aaPredicted RBP8.56□□□□□ -1.04
ITGA6-211ENST00000497107 DNMT3LQ9UJW3 386 aa8.56□□□□□ -1.04
ITGA6-211ENST00000497107 CCDC7Q96M83 1385 aa8.56□□□□□ -1.04
ITGA6-211ENST00000497107 ADGRL1O94910 1474 aa8.56□□□□□ -1.04
ITGA6-211ENST00000497107 MAGI2Q86UL8 1455 aa8.56□□□□□ -1.04
ITGA6-211ENST00000497107 WASHC2AQ641Q2 1341 aa8.55□□□□□ -1.04
ITGA6-211ENST00000497107 SPATA31E1Q6ZUB1 1445 aa8.55□□□□□ -1.04
ITGA6-211ENST00000497107 GNRH1P01148 92 aa8.55□□□□□ -1.04
ITGA6-211ENST00000497107 POLMQ9NP87 494 aaPredicted RBP8.55□□□□□ -1.04
ITGA6-211ENST00000497107 ZFYVE16Q7Z3T8 1539 aa8.54□□□□□ -1.04
ITGA6-211ENST00000497107 ATP10AO60312 1499 aa8.54□□□□□ -1.04
ITGA6-211ENST00000497107 RALGAPBQ86X10 1494 aa8.54□□□□□ -1.04
ITGA6-211ENST00000497107 KANK1Q14678 1352 aa8.54□□□□□ -1.04
ITGA6-211ENST00000497107 ATP9BO43861 1147 aa8.54□□□□□ -1.04
ITGA6-211ENST00000497107 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.54□□□□□ -1.04
ITGA6-211ENST00000497107 PLEKHM2Q8IWE5 1019 aa8.54□□□□□ -1.04
ITGA6-211ENST00000497107 DCAF11Q8TEB1 546 aa8.54□□□□□ -1.04
ITGA6-211ENST00000497107 UCN2Q96RP3 112 aa8.54□□□□□ -1.04
ITGA6-211ENST00000497107 INSM2Q96T92 566 aaPredicted RBP8.54□□□□□ -1.04
ITGA6-211ENST00000497107 C1orf115Q9H7X2 142 aa8.54□□□□□ -1.04
ITGA6-211ENST00000497107 ATP7AQ04656 1500 aa8.54□□□□□ -1.04
ITGA6-211ENST00000497107 CD109Q6YHK3 1445 aa8.54□□□□□ -1.04
ITGA6-211ENST00000497107 CNTLNQ9NXG0 1405 aa8.54□□□□□ -1.04
ITGA6-211ENST00000497107 ARID4BQ4LE39 1312 aaPredicted RBP8.54□□□□□ -1.04
ITGA6-211ENST00000497107 CFAP74Q9C0B2 1584 aa8.53□□□□□ -1.04
ITGA6-211ENST00000497107 DHX29Q7Z478 1369 aaKnown RBP8.53□□□□□ -1.04
ITGA6-211ENST00000497107 USP47Q96K76 1375 aa8.53□□□□□ -1.04
ITGA6-211ENST00000497107 USP17L5A8MUK1 530 aa8.53□□□□□ -1.04
ITGA6-211ENST00000497107 ARHGEF15O94989 841 aa8.53□□□□□ -1.04
ITGA6-211ENST00000497107 GPC1P35052 558 aa8.53□□□□□ -1.04
ITGA6-211ENST00000497107 CLN3Q13286 438 aa8.53□□□□□ -1.04
ITGA6-211ENST00000497107 ESCO1Q5FWF5 840 aa8.53□□□□□ -1.04
ITGA6-211ENST00000497107 NLRP3Q96P20 1036 aa8.53□□□□□ -1.04
ITGA6-211ENST00000497107 CARD11Q9BXL7 1154 aa8.53□□□□□ -1.04
ITGA6-211ENST00000497107 ARHGEF10LQ9HCE6 1279 aa8.53□□□□□ -1.04
ITGA6-211ENST00000497107 NOD1Q9Y239 953 aa8.53□□□□□ -1.04
ITGA6-211ENST00000497107 INO80Q9ULG1 1556 aaPredicted RBP8.52□□□□□ -1.04
ITGA6-211ENST00000497107 A0A1W2PRU2 124 aa8.52□□□□□ -1.05
ITGA6-211ENST00000497107 MEN1O00255 615 aa8.52□□□□□ -1.05
ITGA6-211ENST00000497107 CTSOP43234 321 aaPredicted RBP8.52□□□□□ -1.05
ITGA6-211ENST00000497107 RNF144AP50876 292 aaPredicted RBP8.52□□□□□ -1.05
ITGA6-211ENST00000497107 NCOA4Q13772 614 aa8.52□□□□□ -1.05
ITGA6-211ENST00000497107 COL25A1Q9BXS0 654 aaPredicted RBP8.52□□□□□ -1.05
ITGA6-211ENST00000497107 PLA2R1Q13018 1463 aa8.51□□□□□ -1.05
ITGA6-211ENST00000497107 USP17L3A6NCW0 530 aa8.51□□□□□ -1.05
ITGA6-211ENST00000497107 USP17L4A6NCW7 530 aa8.51□□□□□ -1.05
ITGA6-211ENST00000497107 IRS1P35568 1242 aa8.51□□□□□ -1.05
ITGA6-211ENST00000497107 RGL3Q3MIN7 710 aa8.51□□□□□ -1.05
ITGA6-211ENST00000497107 RNFT1Q5M7Z0 435 aa8.51□□□□□ -1.05
ITGA6-211ENST00000497107 USP17L2Q6R6M4 530 aa8.51□□□□□ -1.05
ITGA6-211ENST00000497107 TBC1D9Q6ZT07 1266 aa8.51□□□□□ -1.05
ITGA6-211ENST00000497107 USP17L1Q7RTZ2 530 aa8.51□□□□□ -1.05
ITGA6-211ENST00000497107 TRIM50Q86XT4 487 aa8.51□□□□□ -1.05
ITGA6-211ENST00000497107 RNF217Q8TC41 542 aa8.51□□□□□ -1.05
ITGA6-211ENST00000497107 WHAMMQ8TF30 809 aa8.51□□□□□ -1.05
ITGA6-211ENST00000497107 NANOS1Q8WY41 292 aaKnown RBP8.51□□□□□ -1.05
ITGA6-211ENST00000497107 POLR1AO95602 1720 aaPredicted RBP8.51□□□□□ -1.05
ITGA6-211ENST00000497107 KIF7Q2M1P5 1343 aa8.51□□□□□ -1.05
ITGA6-211ENST00000497107 ZNF518AQ6AHZ1 1483 aa8.51□□□□□ -1.05
ITGA6-211ENST00000497107 EIF2AK4Q9P2K8 1649 aaKnown RBP8.51□□□□□ -1.05
ITGA6-211ENST00000497107 KIF3BO15066 747 aa8.5□□□□□ -1.05
ITGA6-211ENST00000497107 SLURP2P0DP57 97 aa8.5□□□□□ -1.05
ITGA6-211ENST00000497107 FOXK2Q01167 660 aa8.5□□□□□ -1.05
ITGA6-211ENST00000497107 SVOPQ8N4V2 548 aa8.5□□□□□ -1.05
ITGA6-211ENST00000497107 ESYT1Q9BSJ8 1104 aa8.5□□□□□ -1.05
ITGA6-211ENST00000497107 KDM5CP41229 1560 aa8.49□□□□□ -1.05
ITGA6-211ENST00000497107 FOXD4L5Q5VV16 416 aaPredicted RBP8.49□□□□□ -1.05
ITGA6-211ENST00000497107 PPP1R12CQ9BZL4 782 aa8.49□□□□□ -1.05
ITGA6-211ENST00000497107 DEPDC5O75140 1603 aa8.49□□□□□ -1.05
ITGA6-211ENST00000497107 ROCK2O75116 1388 aaKnown RBP8.48□□□□□ -1.05
ITGA6-211ENST00000497107 PRAG1Q86YV5 1406 aa8.48□□□□□ -1.05
ITGA6-211ENST00000497107 PALM3A6NDB9 673 aaPredicted RBP8.48□□□□□ -1.05
ITGA6-211ENST00000497107 FIGNL2A6NMB9 653 aa8.48□□□□□ -1.05
ITGA6-211ENST00000497107 ATP1A2P50993 1020 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms