RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 BACH1O14867 736 aa8.98□□□□□ -0.97
SMC4-224ENST00000494612 EFSO43281 561 aa8.98□□□□□ -0.97
SMC4-224ENST00000494612 EPHA4P54764 986 aa8.98□□□□□ -0.97
SMC4-224ENST00000494612 GTF2IP78347 998 aa8.98□□□□□ -0.97
SMC4-224ENST00000494612 ZNF468Q5VIY5 522 aaPredicted RBP8.98□□□□□ -0.97
SMC4-224ENST00000494612 NACC1Q96RE7 527 aa8.98□□□□□ -0.97
SMC4-224ENST00000494612 STRN4Q9NRL3 753 aa8.98□□□□□ -0.97
SMC4-224ENST00000494612 ZNF358Q9NW07 568 aa8.98□□□□□ -0.97
SMC4-224ENST00000494612 PARP3Q9Y6F1 533 aa8.98□□□□□ -0.97
SMC4-224ENST00000494612 TXLNAP40222 546 aa8.97□□□□□ -0.97
SMC4-224ENST00000494612 NCOA4Q13772 614 aa8.97□□□□□ -0.97
SMC4-224ENST00000494612 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.97□□□□□ -0.97
SMC4-224ENST00000494612 GJA3Q9Y6H8 435 aa8.97□□□□□ -0.97
SMC4-224ENST00000494612 TEAD4Q15561 434 aa8.96□□□□□ -0.98
SMC4-224ENST00000494612 PRSS36Q5K4E3 855 aa8.96□□□□□ -0.98
SMC4-224ENST00000494612 L3MBTL2Q969R5 705 aa8.96□□□□□ -0.98
SMC4-224ENST00000494612 POM121Q96HA1 1249 aa8.96□□□□□ -0.98
SMC4-224ENST00000494612 ELOA3CA0A087WX78 387 aaPredicted RBP8.95□□□□□ -0.98
SMC4-224ENST00000494612 ELOA3DA6NLF2 546 aaPredicted RBP8.95□□□□□ -0.98
SMC4-224ENST00000494612 LAMC2Q13753 1193 aa8.95□□□□□ -0.98
SMC4-224ENST00000494612 ELOA3BQ3SY89 546 aa8.95□□□□□ -0.98
SMC4-224ENST00000494612 ELOA3Q8NG57 546 aa8.95□□□□□ -0.98
SMC4-224ENST00000494612 EML1O00423 815 aa8.94□□□□□ -0.98
SMC4-224ENST00000494612 ZBTB7BO15156 539 aaPredicted RBP8.94□□□□□ -0.98
SMC4-224ENST00000494612 NOS2P35228 1153 aa8.94□□□□□ -0.98
SMC4-224ENST00000494612 MDFIQ99750 246 aa8.94□□□□□ -0.98
SMC4-224ENST00000494612 MARK1Q9P0L2 795 aa8.94□□□□□ -0.98
SMC4-224ENST00000494612 USP17L5A8MUK1 530 aa8.93□□□□□ -0.98
SMC4-224ENST00000494612 TRIM28Q13263 835 aaKnown RBP8.93□□□□□ -0.98
SMC4-224ENST00000494612 BICDL1Q6ZP65 573 aa8.93□□□□□ -0.98
SMC4-224ENST00000494612 TNS4Q8IZW8 715 aa8.93□□□□□ -0.98
SMC4-224ENST00000494612 DEPDC4Q8N2C3 294 aa8.93□□□□□ -0.98
SMC4-224ENST00000494612 ERICH6Q7L0X2 663 aa8.92□□□□□ -0.98
SMC4-224ENST00000494612 ADAMTS19Q8TE59 1207 aa8.92□□□□□ -0.98
SMC4-224ENST00000494612 SUPT5HO00267 1087 aaKnown RBP8.91□□□□□ -0.98
SMC4-224ENST00000494612 PSME1Q06323 249 aa8.91□□□□□ -0.98
SMC4-224ENST00000494612 LRP8Q14114 963 aa8.91□□□□□ -0.98
SMC4-224ENST00000494612 LRRC69Q6ZNQ3 347 aa8.91□□□□□ -0.98
SMC4-224ENST00000494612 SLC9A9Q8IVB4 645 aa8.91□□□□□ -0.98
SMC4-224ENST00000494612 FAM229AH3BQW9 127 aa8.9□□□□□ -0.98
SMC4-224ENST00000494612 TBCELQ5QJ74 424 aa8.9□□□□□ -0.98
SMC4-224ENST00000494612 POTEAQ6S8J7 498 aa8.9□□□□□ -0.98
SMC4-224ENST00000494612 SYT9Q86SS6 491 aa8.9□□□□□ -0.98
SMC4-224ENST00000494612 PLEKHM2Q8IWE5 1019 aa8.9□□□□□ -0.98
SMC4-224ENST00000494612 WWC1Q8IX03 1113 aa8.9□□□□□ -0.98
SMC4-224ENST00000494612 GPC6Q9Y625 555 aaPredicted RBP8.9□□□□□ -0.98
SMC4-224ENST00000494612 POM121CA8CG34 1229 aa8.89□□□□□ -0.99
SMC4-224ENST00000494612 M0R082 166 aa8.89□□□□□ -0.99
SMC4-224ENST00000494612 SH3PXD2AQ5TCZ1 1133 aa8.89□□□□□ -0.99
SMC4-224ENST00000494612 TRIM50Q86XT4 487 aa8.89□□□□□ -0.99
SMC4-224ENST00000494612 ZNF417Q8TAU3 575 aa8.89□□□□□ -0.99
SMC4-224ENST00000494612 ZNF587Q96SQ5 575 aaPredicted RBP8.89□□□□□ -0.99
SMC4-224ENST00000494612 KIAA1024Q9UPX6 916 aa8.89□□□□□ -0.99
SMC4-224ENST00000494612 SERTM1A2A2V5 107 aa8.88□□□□□ -0.99
SMC4-224ENST00000494612 CLDN10P78369 228 aa8.88□□□□□ -0.99
SMC4-224ENST00000494612 UCN2Q96RP3 112 aa8.88□□□□□ -0.99
SMC4-224ENST00000494612 ADARB2-AS1A8MUL3 147 aa8.87□□□□□ -0.99
SMC4-224ENST00000494612 SIN3BO75182 1162 aa8.87□□□□□ -0.99
SMC4-224ENST00000494612 H2AFB1P0C5Y9 115 aa8.87□□□□□ -0.99
SMC4-224ENST00000494612 H2AFB2P0C5Z0 115 aa8.87□□□□□ -0.99
SMC4-224ENST00000494612 SFSWAPQ12872 951 aaKnown RBP8.87□□□□□ -0.99
SMC4-224ENST00000494612 GRIK4Q16099 956 aa8.87□□□□□ -0.99
SMC4-224ENST00000494612 TPCN2Q8NHX9 752 aa8.87□□□□□ -0.99
SMC4-224ENST00000494612 GOLGA2P5Q9HBQ8 144 aa8.87□□□□□ -0.99
SMC4-224ENST00000494612 ZNF232Q9UNY5 417 aa8.87□□□□□ -0.99
SMC4-224ENST00000494612 USP17L3A6NCW0 530 aa8.86□□□□□ -0.99
SMC4-224ENST00000494612 USP17L4A6NCW7 530 aa8.86□□□□□ -0.99
SMC4-224ENST00000494612 C9orf172C9J069 976 aa8.86□□□□□ -0.99
SMC4-224ENST00000494612 RAD21O60216 631 aa8.86□□□□□ -0.99
SMC4-224ENST00000494612 HIRAP54198 1017 aaPredicted RBP8.86□□□□□ -0.99
SMC4-224ENST00000494612 HDGFL1Q5TGJ6 251 aa8.86□□□□□ -0.99
SMC4-224ENST00000494612 C1orf53Q5VUE5 145 aa8.86□□□□□ -0.99
SMC4-224ENST00000494612 CCDC102BQ68D86 513 aa8.86□□□□□ -0.99
SMC4-224ENST00000494612 USP17L2Q6R6M4 530 aa8.86□□□□□ -0.99
SMC4-224ENST00000494612 USP17L1Q7RTZ2 530 aa8.86□□□□□ -0.99
SMC4-224ENST00000494612 SLC30A3Q99726 388 aa8.86□□□□□ -0.99
SMC4-224ENST00000494612 DKK1O94907 266 aa8.85□□□□□ -0.99
SMC4-224ENST00000494612 ATP1A2P50993 1020 aa8.85□□□□□ -0.99
SMC4-224ENST00000494612 COL9A3Q14050 684 aaPredicted RBP8.85□□□□□ -0.99
SMC4-224ENST00000494612 KRTAP9-9Q9BYP9 154 aa8.85□□□□□ -0.99
SMC4-224ENST00000494612 KRTAP9-4Q9BYQ2 154 aa8.85□□□□□ -0.99
SMC4-224ENST00000494612 ZMYND15Q9H091 742 aa8.85□□□□□ -0.99
SMC4-224ENST00000494612 TSPAN10Q9H1Z9 355 aaPredicted RBP8.85□□□□□ -0.99
SMC4-224ENST00000494612 PRDM6Q9NQX0 595 aa8.85□□□□□ -0.99
SMC4-224ENST00000494612 STARD13Q9Y3M8 1113 aa8.85□□□□□ -0.99
SMC4-224ENST00000494612 M0R2N6 131 aa8.84□□□□□ -0.99
SMC4-224ENST00000494612 HYAL3O43820 417 aaPredicted RBP8.84□□□□□ -0.99
SMC4-224ENST00000494612 FLIIQ13045 1269 aa8.84□□□□□ -0.99
SMC4-224ENST00000494612 LARGE2Q8N3Y3 721 aa8.84□□□□□ -0.99
SMC4-224ENST00000494612 TNFRSF25Q93038 417 aa8.84□□□□□ -0.99
SMC4-224ENST00000494612 NEUROD4Q9HD90 331 aa8.84□□□□□ -0.99
SMC4-224ENST00000494612 ATP9BO43861 1147 aa8.83□□□□□ -1
SMC4-224ENST00000494612 PSMA6P60900 246 aaKnown RBP8.83□□□□□ -1
SMC4-224ENST00000494612 MICALL1Q8N3F8 863 aa8.83□□□□□ -1
SMC4-224ENST00000494612 RHPN1Q8TCX5 695 aa8.83□□□□□ -1
SMC4-224ENST00000494612 CLUAP1Q96AJ1 413 aa8.83□□□□□ -1
SMC4-224ENST00000494612 PALM3A6NDB9 673 aaPredicted RBP8.82□□□□□ -1
SMC4-224ENST00000494612 UBTFP17480 764 aaKnown RBP8.82□□□□□ -1
SMC4-224ENST00000494612 KCNQ4P56696 695 aa8.82□□□□□ -1
SMC4-224ENST00000494612 NEUROD1Q13562 356 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms