RNA–Protein interactions for RNA: ENST00000488065.1

PITRM1-210, Transcript of pitrilysin metallopeptidase 1, humanhuman

TSL 5

Gene PITRM1, Length 851 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITRM1-210ENST00000488065 SIK1P57059 783 aa13.13□□□□□ -0.31
PITRM1-210ENST00000488065 KRT24Q2M2I5 525 aa13.13□□□□□ -0.31
PITRM1-210ENST00000488065 TWISTNBQ3B726 338 aaPredicted RBP13.13□□□□□ -0.31
PITRM1-210ENST00000488065 C8orf58Q8NAV2 365 aa13.13□□□□□ -0.31
PITRM1-210ENST00000488065 TRPC6Q9Y210 931 aa13.13□□□□□ -0.31
PITRM1-210ENST00000488065 MAP3K13O43283 966 aa13.12□□□□□ -0.31
PITRM1-210ENST00000488065 VSIG10Q8N0Z9 540 aa13.12□□□□□ -0.31
PITRM1-210ENST00000488065 TEX13AQ9BXU3 409 aaPredicted RBP13.12□□□□□ -0.31
PITRM1-210ENST00000488065 EIF2S2P20042 333 aaKnown RBP13.11□□□□□ -0.31
PITRM1-210ENST00000488065 TSPYL6Q8N831 410 aa13.11□□□□□ -0.31
PITRM1-210ENST00000488065 CHMP4AQ9BY43 222 aa13.11□□□□□ -0.31
PITRM1-210ENST00000488065 KCPQ6ZWJ8 1503 aa13.11□□□□□ -0.31
PITRM1-210ENST00000488065 SOS1Q07889 1333 aaPredicted RBP13.11□□□□□ -0.31
PITRM1-210ENST00000488065 STARD3NLO95772 234 aa13.1□□□□□ -0.31
PITRM1-210ENST00000488065 HOXB7P09629 217 aa13.1□□□□□ -0.31
PITRM1-210ENST00000488065 ATN1P54259 1190 aaPredicted RBP13.1□□□□□ -0.31
PITRM1-210ENST00000488065 DNAJC10Q8IXB1 793 aa13.1□□□□□ -0.31
PITRM1-210ENST00000488065 METRNQ9UJH8 293 aa13.1□□□□□ -0.31
PITRM1-210ENST00000488065 ADCY9O60503 1353 aa13.09□□□□□ -0.31
PITRM1-210ENST00000488065 PRAMEF22A3QJZ6 481 aa13.09□□□□□ -0.31
PITRM1-210ENST00000488065 VAMP4O75379 141 aa13.09□□□□□ -0.31
PITRM1-210ENST00000488065 PHF14O94880 888 aa13.09□□□□□ -0.31
PITRM1-210ENST00000488065 CT47B1P0C2W7 299 aaPredicted RBP13.09□□□□□ -0.31
PITRM1-210ENST00000488065 HMGB2P26583 209 aaKnown RBP13.09□□□□□ -0.31
PITRM1-210ENST00000488065 HDGFL1Q5TGJ6 251 aa13.09□□□□□ -0.31
PITRM1-210ENST00000488065 ZNF526Q8TF50 670 aaPredicted RBP13.09□□□□□ -0.31
PITRM1-210ENST00000488065 NECTIN2Q92692 538 aa13.09□□□□□ -0.31
PITRM1-210ENST00000488065 KIAA1551Q9HCM1 1747 aa13.08□□□□□ -0.32
PITRM1-210ENST00000488065 UBR2Q8IWV8 1755 aa13.08□□□□□ -0.32
PITRM1-210ENST00000488065 CENPBP07199 599 aaPredicted RBP13.08□□□□□ -0.32
PITRM1-210ENST00000488065 CCDC30Q5VVM6 783 aa13.08□□□□□ -0.32
PITRM1-210ENST00000488065 SLC4A9Q96Q91 983 aa13.08□□□□□ -0.32
PITRM1-210ENST00000488065 STK31Q9BXU1 1019 aa13.08□□□□□ -0.32
PITRM1-210ENST00000488065 USP16Q9Y5T5 823 aa13.08□□□□□ -0.32
PITRM1-210ENST00000488065 ITPK1Q13572 414 aa13.07□□□□□ -0.32
PITRM1-210ENST00000488065 ZNF428Q96B54 188 aa13.07□□□□□ -0.32
PITRM1-210ENST00000488065 TCERG1O14776 1098 aaKnown RBP13.06□□□□□ -0.32
PITRM1-210ENST00000488065 POTEJP0CG39 1038 aa13.06□□□□□ -0.32
PITRM1-210ENST00000488065 SLC39A7Q92504 469 aa13.06□□□□□ -0.32
PITRM1-210ENST00000488065 AK7Q96M32 723 aa13.06□□□□□ -0.32
PITRM1-210ENST00000488065 CICQ96RK0 1608 aaPredicted RBP13.06□□□□□ -0.32
PITRM1-210ENST00000488065 N4BP2Q86UW6 1770 aaPredicted RBP13.05□□□□□ -0.32
PITRM1-210ENST00000488065 GRIN3BO60391 1043 aa13.05□□□□□ -0.32
PITRM1-210ENST00000488065 C7P10643 843 aa13.05□□□□□ -0.32
PITRM1-210ENST00000488065 CYP19A1P11511 503 aaPredicted RBP13.05□□□□□ -0.32
PITRM1-210ENST00000488065 NUBP1P53384 320 aa13.05□□□□□ -0.32
PITRM1-210ENST00000488065 NPM2Q86SE8 214 aaKnown RBP13.05□□□□□ -0.32
PITRM1-210ENST00000488065 LINC00116Q8NCU8 138 aa13.05□□□□□ -0.32
PITRM1-210ENST00000488065 BMP2KQ9NSY1 1161 aaPredicted RBP13.05□□□□□ -0.32
PITRM1-210ENST00000488065 RCAN3Q9UKA8 241 aa13.05□□□□□ -0.32
PITRM1-210ENST00000488065 A1BGP04217 495 aa13.04□□□□□ -0.32
PITRM1-210ENST00000488065 MYL6BP14649 208 aa13.04□□□□□ -0.32
PITRM1-210ENST00000488065 CANXP27824 592 aaKnown RBP13.04□□□□□ -0.32
PITRM1-210ENST00000488065 CRKLP46109 303 aaKnown RBP13.04□□□□□ -0.32
PITRM1-210ENST00000488065 ALDH1L2Q3SY69 923 aa13.04□□□□□ -0.32
PITRM1-210ENST00000488065 SMC4Q9NTJ3 1288 aa13.04□□□□□ -0.32
PITRM1-210ENST00000488065 CCDC87Q9NVE4 849 aa13.04□□□□□ -0.32
PITRM1-210ENST00000488065 CHPF2Q9P2E5 772 aa13.04□□□□□ -0.32
PITRM1-210ENST00000488065 DBF4Q9UBU7 674 aaPredicted RBP13.04□□□□□ -0.32
PITRM1-210ENST00000488065 ZNF330Q9Y3S2 320 aaPredicted RBP13.04□□□□□ -0.32
PITRM1-210ENST00000488065 ERBB4Q15303 1308 aa13.04□□□□□ -0.32
PITRM1-210ENST00000488065 C4AP0C0L4 1744 aa13.03□□□□□ -0.32
PITRM1-210ENST00000488065 COL5A3P25940 1745 aaPredicted RBP13.03□□□□□ -0.32
PITRM1-210ENST00000488065 TJP1Q07157 1748 aa13.03□□□□□ -0.32
PITRM1-210ENST00000488065 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.03□□□□□ -0.32
PITRM1-210ENST00000488065 RARSP54136 660 aaKnown RBP13.03□□□□□ -0.32
PITRM1-210ENST00000488065 SSH1Q8WYL5 1049 aa13.03□□□□□ -0.32
PITRM1-210ENST00000488065 BCL2L13Q9BXK5 485 aa13.03□□□□□ -0.32
PITRM1-210ENST00000488065 GPBP1L1Q9HC44 474 aaPredicted RBP13.03□□□□□ -0.32
PITRM1-210ENST00000488065 CD2APQ9Y5K6 639 aa13.03□□□□□ -0.32
PITRM1-210ENST00000488065 ZNF831Q5JPB2 1677 aa13.02□□□□□ -0.32
PITRM1-210ENST00000488065 LAMB4A4D0S4 1761 aa13.02□□□□□ -0.32
PITRM1-210ENST00000488065 KIF13BQ9NQT8 1826 aa13.02□□□□□ -0.32
PITRM1-210ENST00000488065 PIP4K2AP48426 406 aaPredicted RBP13.02□□□□□ -0.33
PITRM1-210ENST00000488065 RC3H1Q5TC82 1133 aaKnown RBP13.02□□□□□ -0.33
PITRM1-210ENST00000488065 INTS5Q6P9B9 1019 aaKnown RBP13.02□□□□□ -0.33
PITRM1-210ENST00000488065 DDX21Q9NR30 783 aaKnown RBP eCLIP13.02□□□□□ -0.33
PITRM1-210ENST00000488065 HYPKQ9NX55 129 aa13.02□□□□□ -0.33
PITRM1-210ENST00000488065 CNTNAP4Q9C0A0 1308 aa13.02□□□□□ -0.33
PITRM1-210ENST00000488065 GNPATO15228 680 aa13.01□□□□□ -0.33
PITRM1-210ENST00000488065 ANXA1P04083 346 aa13.01□□□□□ -0.33
PITRM1-210ENST00000488065 MRPL50Q8N5N7 158 aaKnown RBP13.01□□□□□ -0.33
PITRM1-210ENST00000488065 ZBTB1Q9Y2K1 713 aa13.01□□□□□ -0.33
PITRM1-210ENST00000488065 PXDNLA1KZ92 1463 aa13.01□□□□□ -0.33
PITRM1-210ENST00000488065 NBPF26B4DH59 902 aa13□□□□□ -0.33
PITRM1-210ENST00000488065 BCAR3O75815 825 aa13□□□□□ -0.33
PITRM1-210ENST00000488065 IL6STP40189 918 aaPredicted RBP13□□□□□ -0.33
PITRM1-210ENST00000488065 AIMP1Q12904 312 aaKnown RBP13□□□□□ -0.33
PITRM1-210ENST00000488065 PROSER3Q2NL68 480 aa13□□□□□ -0.33
PITRM1-210ENST00000488065 IFFO2Q5TF58 517 aa13□□□□□ -0.33
PITRM1-210ENST00000488065 NBPF10Q6P3W6 841 aaKnown RBP13□□□□□ -0.33
PITRM1-210ENST00000488065 NBPF15Q8N660 670 aa13□□□□□ -0.33
PITRM1-210ENST00000488065 FLAD1Q8NFF5 587 aa13□□□□□ -0.33
PITRM1-210ENST00000488065 RTCBQ9Y3I0 505 aaKnown RBP13□□□□□ -0.33
PITRM1-210ENST00000488065 PCNTO95613 3336 aa13□□□□□ -0.33
PITRM1-210ENST00000488065 BRCA1P38398 1863 aaKnown RBP12.99□□□□□ -0.33
PITRM1-210ENST00000488065 RPS6KA4O75676 772 aa12.99□□□□□ -0.33
PITRM1-210ENST00000488065 PDIA6Q15084 440 aa12.99□□□□□ -0.33
PITRM1-210ENST00000488065 FRAT1Q92837 279 aaPredicted RBP12.99□□□□□ -0.33
PITRM1-210ENST00000488065 KIF16BQ96L93 1317 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms