RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 GNPATO15228 680 aa13.97□□□□□ -0.17
HDLBP-242ENST00000488013 PLIN1O60240 522 aa13.97□□□□□ -0.17
HDLBP-242ENST00000488013 SSFA2P28290 1259 aa13.97□□□□□ -0.17
HDLBP-242ENST00000488013 AIMP1Q12904 312 aaKnown RBP13.97□□□□□ -0.17
HDLBP-242ENST00000488013 INTS3Q68E01 1043 aaKnown RBP13.97□□□□□ -0.17
HDLBP-242ENST00000488013 G2E3Q7L622 706 aa13.97□□□□□ -0.17
HDLBP-242ENST00000488013 PROM2Q8N271 834 aa13.97□□□□□ -0.17
HDLBP-242ENST00000488013 PI4KAP1Q8N8J0 262 aa13.97□□□□□ -0.17
HDLBP-242ENST00000488013 LRRC4BQ9NT99 713 aa13.97□□□□□ -0.17
HDLBP-242ENST00000488013 DDX19BQ9UMR2 479 aa13.97□□□□□ -0.17
HDLBP-242ENST00000488013 ZNF652Q9Y2D9 606 aa13.97□□□□□ -0.17
HDLBP-242ENST00000488013 ALDH1L1O75891 902 aa13.96□□□□□ -0.17
HDLBP-242ENST00000488013 ANXA1P04083 346 aa13.96□□□□□ -0.17
HDLBP-242ENST00000488013 TRAPPC3LQ5T215 181 aa13.96□□□□□ -0.17
HDLBP-242ENST00000488013 CLEC4GQ6UXB4 293 aa13.96□□□□□ -0.17
HDLBP-242ENST00000488013 DZIP3Q86Y13 1208 aaKnown RBP13.96□□□□□ -0.17
HDLBP-242ENST00000488013 MAP3K2Q9Y2U5 619 aa13.96□□□□□ -0.17
HDLBP-242ENST00000488013 ZNF330Q9Y3S2 320 aaPredicted RBP13.96□□□□□ -0.17
HDLBP-242ENST00000488013 MAP3K15Q6ZN16 1313 aa13.95□□□□□ -0.18
HDLBP-242ENST00000488013 CICQ96RK0 1608 aaPredicted RBP13.95□□□□□ -0.18
HDLBP-242ENST00000488013 EN1Q05925 392 aaPredicted RBP13.95□□□□□ -0.18
HDLBP-242ENST00000488013 MVPQ14764 893 aaKnown RBP13.95□□□□□ -0.18
HDLBP-242ENST00000488013 LINS1Q8NG48 757 aa13.95□□□□□ -0.18
HDLBP-242ENST00000488013 CLUAP1Q96AJ1 413 aa13.95□□□□□ -0.18
HDLBP-242ENST00000488013 METTL22Q9BUU2 404 aaPredicted RBP13.95□□□□□ -0.18
HDLBP-242ENST00000488013 SRCIN1Q9C0H9 1055 aa13.95□□□□□ -0.18
HDLBP-242ENST00000488013 BTAF1O14981 1849 aa13.94□□□□□ -0.18
HDLBP-242ENST00000488013 KAT6BQ8WYB5 2073 aa13.94□□□□□ -0.18
HDLBP-242ENST00000488013 ZPR1O75312 459 aa13.94□□□□□ -0.18
HDLBP-242ENST00000488013 RFC4P35249 363 aa13.94□□□□□ -0.18
HDLBP-242ENST00000488013 TRIM28Q13263 835 aaKnown RBP13.94□□□□□ -0.18
HDLBP-242ENST00000488013 SLC4A10Q6U841 1118 aa13.94□□□□□ -0.18
HDLBP-242ENST00000488013 ITPRIPQ8IWB1 547 aa13.94□□□□□ -0.18
HDLBP-242ENST00000488013 ARXQ96QS3 562 aa13.94□□□□□ -0.18
HDLBP-242ENST00000488013 TFCP2L1Q9NZI6 479 aa13.94□□□□□ -0.18
HDLBP-242ENST00000488013 COL15A1P39059 1388 aa13.94□□□□□ -0.18
HDLBP-242ENST00000488013 PXDNLA1KZ92 1463 aa13.93□□□□□ -0.18
HDLBP-242ENST00000488013 ATP10DQ9P241 1426 aa13.93□□□□□ -0.18
HDLBP-242ENST00000488013 PIP4K2AP48426 406 aaPredicted RBP13.93□□□□□ -0.18
HDLBP-242ENST00000488013 KCNQ4P56696 695 aa13.93□□□□□ -0.18
HDLBP-242ENST00000488013 GIGYF2Q6Y7W6 1299 aaKnown RBP13.93□□□□□ -0.18
HDLBP-242ENST00000488013 PANK1Q8TE04 598 aa13.93□□□□□ -0.18
HDLBP-242ENST00000488013 STK32BQ9NY57 414 aa13.93□□□□□ -0.18
HDLBP-242ENST00000488013 NARFQ9UHQ1 456 aa13.93□□□□□ -0.18
HDLBP-242ENST00000488013 C5P01031 1676 aa13.92□□□□□ -0.18
HDLBP-242ENST00000488013 F6X3S4 739 aa13.92□□□□□ -0.18
HDLBP-242ENST00000488013 GNAI3P08754 354 aa13.92□□□□□ -0.18
HDLBP-242ENST00000488013 HSP90B1P14625 803 aaKnown RBP13.92□□□□□ -0.18
HDLBP-242ENST00000488013 TCIRG1Q13488 830 aa13.92□□□□□ -0.18
HDLBP-242ENST00000488013 EZH2Q15910 746 aaKnown RBP13.92□□□□□ -0.18
HDLBP-242ENST00000488013 BEND3Q5T5X7 828 aa13.92□□□□□ -0.18
HDLBP-242ENST00000488013 TTLL7Q6ZT98 887 aa13.92□□□□□ -0.18
HDLBP-242ENST00000488013 TMEM57Q8N5G2 664 aa13.92□□□□□ -0.18
HDLBP-242ENST00000488013 UPF1Q92900 1129 aaKnown RBP eCLIP13.92□□□□□ -0.18
HDLBP-242ENST00000488013 AKT1S1Q96B36 256 aa13.92□□□□□ -0.18
HDLBP-242ENST00000488013 ADCY9O60503 1353 aa13.92□□□□□ -0.18
HDLBP-242ENST00000488013 VIRMAQ69YN4 1812 aaKnown RBP13.92□□□□□ -0.18
HDLBP-242ENST00000488013 SBF2Q86WG5 1849 aa13.92□□□□□ -0.18
HDLBP-242ENST00000488013 EP400Q96L91 3159 aa13.91□□□□□ -0.18
HDLBP-242ENST00000488013 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.91□□□□□ -0.18
HDLBP-242ENST00000488013 PARP10Q53GL7 1025 aa13.91□□□□□ -0.18
HDLBP-242ENST00000488013 CCDC191Q8NCU4 936 aa13.91□□□□□ -0.18
HDLBP-242ENST00000488013 TBC1D2BQ9UPU7 963 aa13.91□□□□□ -0.18
HDLBP-242ENST00000488013 COG6Q9Y2V7 657 aa13.91□□□□□ -0.18
HDLBP-242ENST00000488013 LAMB4A4D0S4 1761 aa13.91□□□□□ -0.18
HDLBP-242ENST00000488013 CAMTA2O94983 1202 aa13.9□□□□□ -0.18
HDLBP-242ENST00000488013 RLBP1P12271 317 aa13.9□□□□□ -0.18
HDLBP-242ENST00000488013 C20orf194Q5TEA3 1177 aa13.9□□□□□ -0.18
HDLBP-242ENST00000488013 DEFB132Q7Z7B7 95 aa13.9□□□□□ -0.18
HDLBP-242ENST00000488013 ARHGEF1Q92888 912 aaKnown RBP13.9□□□□□ -0.18
HDLBP-242ENST00000488013 ZBTB3Q9H5J0 574 aa13.9□□□□□ -0.18
HDLBP-242ENST00000488013 ZBTB12Q9Y330 459 aaPredicted RBP13.9□□□□□ -0.18
HDLBP-242ENST00000488013 RGPD3A6NKT7 1758 aaPredicted RBP13.89□□□□□ -0.19
HDLBP-242ENST00000488013 RGPD4Q7Z3J3 1758 aa13.89□□□□□ -0.19
HDLBP-242ENST00000488013 FKBP8Q14318 412 aa13.89□□□□□ -0.19
HDLBP-242ENST00000488013 SLC15A2Q16348 729 aa13.89□□□□□ -0.19
HDLBP-242ENST00000488013 MYD88Q99836 296 aa13.89□□□□□ -0.19
HDLBP-242ENST00000488013 CWC25Q9NXE8 425 aaPredicted RBP13.89□□□□□ -0.19
HDLBP-242ENST00000488013 C9orf78Q9NZ63 289 aaPredicted RBP13.89□□□□□ -0.19
HDLBP-242ENST00000488013 LY75O60449 1722 aa13.89□□□□□ -0.19
HDLBP-242ENST00000488013 USP42Q9H9J4 1324 aaKnown RBP13.89□□□□□ -0.19
HDLBP-242ENST00000488013 TJP1Q07157 1748 aa13.88□□□□□ -0.19
HDLBP-242ENST00000488013 NEURL1BA8MQ27 555 aa13.88□□□□□ -0.19
HDLBP-242ENST00000488013 ZBTB7BO15156 539 aaPredicted RBP13.88□□□□□ -0.19
HDLBP-242ENST00000488013 CRBNQ96SW2 442 aa13.88□□□□□ -0.19
HDLBP-242ENST00000488013 ISCA1Q9BUE6 129 aa13.88□□□□□ -0.19
HDLBP-242ENST00000488013 GRM8O00222 908 aa13.87□□□□□ -0.19
HDLBP-242ENST00000488013 PHF14O94880 888 aa13.87□□□□□ -0.19
HDLBP-242ENST00000488013 GCKRQ14397 625 aa13.87□□□□□ -0.19
HDLBP-242ENST00000488013 NLGN1Q8N2Q7 840 aa13.87□□□□□ -0.19
HDLBP-242ENST00000488013 ZBTB40Q9NUA8 1239 aa13.87□□□□□ -0.19
HDLBP-242ENST00000488013 CACNA1FO60840 1977 aa13.86□□□□□ -0.19
HDLBP-242ENST00000488013 GNAI2P04899 355 aa13.86□□□□□ -0.19
HDLBP-242ENST00000488013 IGKV5-2P06315 115 aa13.86□□□□□ -0.19
HDLBP-242ENST00000488013 UBTFL1P0CB47 393 aaPredicted RBP13.86□□□□□ -0.19
HDLBP-242ENST00000488013 ZNF827Q17R98 1081 aa13.86□□□□□ -0.19
HDLBP-242ENST00000488013 PPP1R42Q7Z4L9 355 aa13.86□□□□□ -0.19
HDLBP-242ENST00000488013 ZNF34Q8IZ26 560 aa13.86□□□□□ -0.19
HDLBP-242ENST00000488013 SLC16A10Q8TF71 515 aa13.86□□□□□ -0.19
HDLBP-242ENST00000488013 SETDB2Q96T68 719 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms