RNA–Protein interactions for RNA: ENST00000486515.1

UBR4-214, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-214ENST00000486515 KIF6Q6ZMV9 814 aa8.83□□□□□ -1
UBR4-214ENST00000486515 DNAJC10Q8IXB1 793 aa8.83□□□□□ -1
UBR4-214ENST00000486515 CHMP4BQ9H444 224 aaKnown RBP8.83□□□□□ -1
UBR4-214ENST00000486515 DDX21Q9NR30 783 aaKnown RBP eCLIP8.83□□□□□ -1
UBR4-214ENST00000486515 MKRN1Q9UHC7 482 aaKnown RBP8.83□□□□□ -1
UBR4-214ENST00000486515 SUPT16HQ9Y5B9 1047 aaKnown RBP8.83□□□□□ -1
UBR4-214ENST00000486515 PTPRCP08575 1304 aa8.82□□□□□ -1
UBR4-214ENST00000486515 A0A087WZG4 1122 aa8.82□□□□□ -1
UBR4-214ENST00000486515 NEXNQ0ZGT2 675 aa8.82□□□□□ -1
UBR4-214ENST00000486515 AIMP1Q12904 312 aaKnown RBP8.82□□□□□ -1
UBR4-214ENST00000486515 RIC3Q7Z5B4 369 aa8.82□□□□□ -1
UBR4-214ENST00000486515 SSH1Q8WYL5 1049 aa8.82□□□□□ -1
UBR4-214ENST00000486515 CCDC87Q9NVE4 849 aa8.82□□□□□ -1
UBR4-214ENST00000486515 CHPF2Q9P2E5 772 aa8.82□□□□□ -1
UBR4-214ENST00000486515 RTCBQ9Y3I0 505 aaKnown RBP8.82□□□□□ -1
UBR4-214ENST00000486515 USP16Q9Y5T5 823 aa8.82□□□□□ -1
UBR4-214ENST00000486515 ITGB4P16144 1822 aa8.82□□□□□ -1
UBR4-214ENST00000486515 BCAR3O75815 825 aa8.81□□□□□ -1
UBR4-214ENST00000486515 CRKLP46109 303 aaKnown RBP8.81□□□□□ -1
UBR4-214ENST00000486515 NOB1Q9ULX3 412 aaKnown RBP8.81□□□□□ -1
UBR4-214ENST00000486515 KDM3BQ7LBC6 1761 aa8.81□□□□□ -1
UBR4-214ENST00000486515 PNPLA7Q6ZV29 1317 aa8.8□□□□□ -1
UBR4-214ENST00000486515 PAPPAQ13219 1627 aa8.8□□□□□ -1
UBR4-214ENST00000486515 PRAMEF22A3QJZ6 481 aa8.8□□□□□ -1
UBR4-214ENST00000486515 GNPATO15228 680 aa8.8□□□□□ -1
UBR4-214ENST00000486515 ZPR1O75312 459 aa8.8□□□□□ -1
UBR4-214ENST00000486515 A1BGP04217 495 aa8.8□□□□□ -1
UBR4-214ENST00000486515 CYP19A1P11511 503 aaPredicted RBP8.8□□□□□ -1
UBR4-214ENST00000486515 IL6STP40189 918 aaPredicted RBP8.8□□□□□ -1
UBR4-214ENST00000486515 BRPF1P55201 1214 aaPredicted RBP8.8□□□□□ -1
UBR4-214ENST00000486515 RRP1P56182 461 aaKnown RBP8.8□□□□□ -1
UBR4-214ENST00000486515 FLIIQ13045 1269 aa8.8□□□□□ -1
UBR4-214ENST00000486515 RC3H1Q5TC82 1133 aaKnown RBP8.8□□□□□ -1
UBR4-214ENST00000486515 SLC4A10Q6U841 1118 aa8.8□□□□□ -1
UBR4-214ENST00000486515 ATF7IPQ6VMQ6 1270 aa8.8□□□□□ -1
UBR4-214ENST00000486515 MRPL50Q8N5N7 158 aaKnown RBP8.8□□□□□ -1
UBR4-214ENST00000486515 FLAD1Q8NFF5 587 aa8.8□□□□□ -1
UBR4-214ENST00000486515 ARHGAP45Q92619 1136 aa8.8□□□□□ -1
UBR4-214ENST00000486515 RRAGCQ9HB90 399 aa8.8□□□□□ -1
UBR4-214ENST00000486515 TFCP2L1Q9NZI6 479 aa8.8□□□□□ -1
UBR4-214ENST00000486515 HDAC5Q9UQL6 1122 aa8.8□□□□□ -1
UBR4-214ENST00000486515 ZNF652Q9Y2D9 606 aa8.8□□□□□ -1
UBR4-214ENST00000486515 KDM2BQ8NHM5 1336 aa8.8□□□□□ -1
UBR4-214ENST00000486515 C5P01031 1676 aa8.79□□□□□ -1
UBR4-214ENST00000486515 NPHP1O15259 732 aa8.79□□□□□ -1
UBR4-214ENST00000486515 HSPA8P11142 646 aaKnown RBP8.79□□□□□ -1
UBR4-214ENST00000486515 RFC4P35249 363 aa8.79□□□□□ -1
UBR4-214ENST00000486515 HSP90AB3PQ58FF7 597 aa8.79□□□□□ -1
UBR4-214ENST00000486515 ANKRD13DQ6ZTN6 518 aa8.79□□□□□ -1
UBR4-214ENST00000486515 COPS6Q7L5N1 327 aa8.79□□□□□ -1
UBR4-214ENST00000486515 DZIP1LQ8IYY4 767 aaKnown RBP8.79□□□□□ -1
UBR4-214ENST00000486515 AKT1S1Q96B36 256 aa8.79□□□□□ -1
UBR4-214ENST00000486515 C10orf71Q711Q0 1435 aa8.79□□□□□ -1
UBR4-214ENST00000486515 PITPNM2Q9BZ72 1349 aa8.79□□□□□ -1
UBR4-214ENST00000486515 CNTNAP4Q9C0A0 1308 aa8.79□□□□□ -1
UBR4-214ENST00000486515 SBF2Q86WG5 1849 aa8.78□□□□□ -1
UBR4-214ENST00000486515 PHF14O94880 888 aa8.78□□□□□ -1
UBR4-214ENST00000486515 CCT4P50991 539 aaKnown RBP8.78□□□□□ -1
UBR4-214ENST00000486515 ITPK1Q13572 414 aa8.78□□□□□ -1
UBR4-214ENST00000486515 PDE3AQ14432 1141 aa8.78□□□□□ -1
UBR4-214ENST00000486515 TRAPPC3LQ5T215 181 aa8.78□□□□□ -1
UBR4-214ENST00000486515 DZIP3Q86Y13 1208 aaKnown RBP8.78□□□□□ -1
UBR4-214ENST00000486515 XAGE3Q8WTP9 111 aa8.78□□□□□ -1
UBR4-214ENST00000486515 CLUAP1Q96AJ1 413 aa8.78□□□□□ -1
UBR4-214ENST00000486515 GCC1Q96CN9 775 aa8.78□□□□□ -1
UBR4-214ENST00000486515 WBP1LQ9NX94 342 aa8.78□□□□□ -1
UBR4-214ENST00000486515 COL24A1Q17RW2 1714 aa8.77□□□□□ -1
UBR4-214ENST00000486515 KCPQ6ZWJ8 1503 aa8.77□□□□□ -1.01
UBR4-214ENST00000486515 PLIN1O60240 522 aa8.77□□□□□ -1.01
UBR4-214ENST00000486515 RPS6KA4O75676 772 aa8.77□□□□□ -1.01
UBR4-214ENST00000486515 ANXA1P04083 346 aa8.77□□□□□ -1.01
UBR4-214ENST00000486515 PIP4K2AP48426 406 aaPredicted RBP8.77□□□□□ -1.01
UBR4-214ENST00000486515 KCNQ4P56696 695 aa8.77□□□□□ -1.01
UBR4-214ENST00000486515 KSR2Q6VAB6 950 aa8.77□□□□□ -1.01
UBR4-214ENST00000486515 ITPRIPQ8IWB1 547 aa8.77□□□□□ -1.01
UBR4-214ENST00000486515 LINC00116Q8NCU8 138 aa8.77□□□□□ -1.01
UBR4-214ENST00000486515 PLBD2Q8NHP8 589 aa8.77□□□□□ -1.01
UBR4-214ENST00000486515 PHAXQ9H814 394 aaKnown RBP8.77□□□□□ -1.01
UBR4-214ENST00000486515 ZBTB1Q9Y2K1 713 aa8.77□□□□□ -1.01
UBR4-214ENST00000486515 MAP3K2Q9Y2U5 619 aa8.77□□□□□ -1.01
UBR4-214ENST00000486515 NHSQ6T4R5 1651 aa8.77□□□□□ -1.01
UBR4-214ENST00000486515 UBR2Q8IWV8 1755 aa8.76□□□□□ -1.01
UBR4-214ENST00000486515 BTAF1O14981 1849 aa8.76□□□□□ -1.01
UBR4-214ENST00000486515 PI4KAP2A4QPH2 592 aa8.76□□□□□ -1.01
UBR4-214ENST00000486515 TRIM27P14373 513 aa8.76□□□□□ -1.01
UBR4-214ENST00000486515 HSP90B1P14625 803 aaKnown RBP8.76□□□□□ -1.01
UBR4-214ENST00000486515 SSFA2P28290 1259 aa8.76□□□□□ -1.01
UBR4-214ENST00000486515 MSL1Q68DK7 614 aa8.76□□□□□ -1.01
UBR4-214ENST00000486515 PI4KAP1Q8N8J0 262 aa8.76□□□□□ -1.01
UBR4-214ENST00000486515 DNAAF4Q8WXU2 420 aa8.76□□□□□ -1.01
UBR4-214ENST00000486515 SLC4A9Q96Q91 983 aa8.76□□□□□ -1.01
UBR4-214ENST00000486515 SRCIN1Q9C0H9 1055 aa8.76□□□□□ -1.01
UBR4-214ENST00000486515 LRRC4BQ9NT99 713 aa8.76□□□□□ -1.01
UBR4-214ENST00000486515 DDX19BQ9UMR2 479 aa8.76□□□□□ -1.01
UBR4-214ENST00000486515 PXDNLA1KZ92 1463 aa8.76□□□□□ -1.01
UBR4-214ENST00000486515 ERVV-1B6SEH8 477 aa8.75□□□□□ -1.01
UBR4-214ENST00000486515 GTF2E1P29083 439 aaPredicted RBP8.75□□□□□ -1.01
UBR4-214ENST00000486515 PDIA6Q15084 440 aa8.75□□□□□ -1.01
UBR4-214ENST00000486515 PROSER3Q2NL68 480 aa8.75□□□□□ -1.01
UBR4-214ENST00000486515 HABP4Q5JVS0 413 aaKnown RBP8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms