RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 SEMA3FQ13275 785 aa6□□□□□ -1.45
PRPF38B-205ENST00000485810 ARSJQ5FYB0 599 aaPredicted RBP6□□□□□ -1.45
PRPF38B-205ENST00000485810 SAMD5Q5TGI4 173 aa6□□□□□ -1.45
PRPF38B-205ENST00000485810 ZDHHC3Q9NYG2 299 aa6□□□□□ -1.45
PRPF38B-205ENST00000485810 PDIA4P13667 645 aaKnown RBP5.99□□□□□ -1.45
PRPF38B-205ENST00000485810 GATA4P43694 442 aa5.99□□□□□ -1.45
PRPF38B-205ENST00000485810 SIRT1Q96EB6 747 aa5.99□□□□□ -1.45
PRPF38B-205ENST00000485810 STARD13Q9Y3M8 1113 aa5.99□□□□□ -1.45
PRPF38B-205ENST00000485810 WASHC4Q2M389 1173 aa5.98□□□□□ -1.45
PRPF38B-205ENST00000485810 MAP7D1Q3KQU3 841 aa5.98□□□□□ -1.45
PRPF38B-205ENST00000485810 MARK1Q9P0L2 795 aa5.98□□□□□ -1.45
PRPF38B-205ENST00000485810 SCRIBQ14160 1630 aa5.98□□□□□ -1.45
PRPF38B-205ENST00000485810 ELOA3CA0A087WX78 387 aaPredicted RBP5.97□□□□□ -1.45
PRPF38B-205ENST00000485810 ELOA3DA6NLF2 546 aaPredicted RBP5.97□□□□□ -1.45
PRPF38B-205ENST00000485810 POM121CA8CG34 1229 aa5.97□□□□□ -1.45
PRPF38B-205ENST00000485810 SPATA31C1P0DKV0 1188 aa5.97□□□□□ -1.45
PRPF38B-205ENST00000485810 ELOA3BQ3SY89 546 aa5.97□□□□□ -1.45
PRPF38B-205ENST00000485810 ZMYM1Q5SVZ6 1142 aa5.97□□□□□ -1.45
PRPF38B-205ENST00000485810 C8orf86Q6ZUL3 223 aa5.97□□□□□ -1.45
PRPF38B-205ENST00000485810 SYT9Q86SS6 491 aa5.97□□□□□ -1.45
PRPF38B-205ENST00000485810 ELOA3Q8NG57 546 aa5.97□□□□□ -1.45
PRPF38B-205ENST00000485810 TPSG1Q9NRR2 321 aa5.97□□□□□ -1.45
PRPF38B-205ENST00000485810 CABP1Q9NZU7 370 aa5.97□□□□□ -1.45
PRPF38B-205ENST00000485810 EPHA4P54764 986 aa5.96□□□□□ -1.45
PRPF38B-205ENST00000485810 SFSWAPQ12872 951 aaKnown RBP5.96□□□□□ -1.45
PRPF38B-205ENST00000485810 LAMC2Q13753 1193 aa5.96□□□□□ -1.45
PRPF38B-205ENST00000485810 NBPF1Q3BBV0 1214 aa5.96□□□□□ -1.45
PRPF38B-205ENST00000485810 KRTAP1-3Q8IUG1 177 aa5.96□□□□□ -1.45
PRPF38B-205ENST00000485810 SLC30A3Q99726 388 aa5.96□□□□□ -1.45
PRPF38B-205ENST00000485810 PRR12Q9ULL5 1215 aa5.96□□□□□ -1.45
PRPF38B-205ENST00000485810 ADARB2-AS1A8MUL3 147 aa5.95□□□□□ -1.46
PRPF38B-205ENST00000485810 FAM229AH3BQW9 127 aa5.95□□□□□ -1.46
PRPF38B-205ENST00000485810 EML1O00423 815 aa5.95□□□□□ -1.46
PRPF38B-205ENST00000485810 RAD21O60216 631 aa5.95□□□□□ -1.46
PRPF38B-205ENST00000485810 TATP17735 454 aaPredicted RBP5.95□□□□□ -1.46
PRPF38B-205ENST00000485810 SH3PXD2AQ5TCZ1 1133 aa5.95□□□□□ -1.46
PRPF38B-205ENST00000485810 CLUAP1Q96AJ1 413 aa5.95□□□□□ -1.46
PRPF38B-205ENST00000485810 PCGF6Q9BYE7 350 aa5.95□□□□□ -1.46
PRPF38B-205ENST00000485810 SCHIP1Q9P0W5 487 aaPredicted RBP5.95□□□□□ -1.46
PRPF38B-205ENST00000485810 SIN3BO75182 1162 aa5.94□□□□□ -1.46
PRPF38B-205ENST00000485810 TEAD4Q15561 434 aa5.94□□□□□ -1.46
PRPF38B-205ENST00000485810 DEPDC4Q8N2C3 294 aa5.94□□□□□ -1.46
PRPF38B-205ENST00000485810 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.94□□□□□ -1.46
PRPF38B-205ENST00000485810 ADAMTS19Q8TE59 1207 aa5.94□□□□□ -1.46
PRPF38B-205ENST00000485810 CHMP4AQ9BY43 222 aa5.94□□□□□ -1.46
PRPF38B-205ENST00000485810 ALG2Q9H553 416 aa5.94□□□□□ -1.46
PRPF38B-205ENST00000485810 DYRK3O43781 588 aa5.93□□□□□ -1.46
PRPF38B-205ENST00000485810 ALBP02768 609 aa5.93□□□□□ -1.46
PRPF38B-205ENST00000485810 SKIP12755 728 aa5.93□□□□□ -1.46
PRPF38B-205ENST00000485810 FLIIQ13045 1269 aa5.93□□□□□ -1.46
PRPF38B-205ENST00000485810 TBCELQ5QJ74 424 aa5.93□□□□□ -1.46
PRPF38B-205ENST00000485810 LRRC69Q6ZNQ3 347 aa5.93□□□□□ -1.46
PRPF38B-205ENST00000485810 MICALL1Q8N3F8 863 aa5.93□□□□□ -1.46
PRPF38B-205ENST00000485810 L3MBTL2Q969R5 705 aa5.93□□□□□ -1.46
PRPF38B-205ENST00000485810 ZNF358Q9NW07 568 aa5.93□□□□□ -1.46
PRPF38B-205ENST00000485810 M0R082 166 aa5.93□□□□□ -1.46
PRPF38B-205ENST00000485810 NID1P14543 1247 aa5.93□□□□□ -1.46
PRPF38B-205ENST00000485810 BRD2P25440 801 aaKnown RBP5.93□□□□□ -1.46
PRPF38B-205ENST00000485810 NOS2P35228 1153 aa5.93□□□□□ -1.46
PRPF38B-205ENST00000485810 C20orf204Q6ZNR8 217 aa5.93□□□□□ -1.46
PRPF38B-205ENST00000485810 BICDL1Q6ZP65 573 aa5.93□□□□□ -1.46
PRPF38B-205ENST00000485810 ZNF417Q8TAU3 575 aa5.93□□□□□ -1.46
PRPF38B-205ENST00000485810 ZNF587Q96SQ5 575 aaPredicted RBP5.93□□□□□ -1.46
PRPF38B-205ENST00000485810 KRTAP4-12Q9BQ66 201 aa5.93□□□□□ -1.46
PRPF38B-205ENST00000485810 PRDM6Q9NQX0 595 aa5.93□□□□□ -1.46
PRPF38B-205ENST00000485810 GJA3Q9Y6H8 435 aa5.93□□□□□ -1.46
PRPF38B-205ENST00000485810 SCO2A0A1W2PP80 73 aa5.92□□□□□ -1.46
PRPF38B-205ENST00000485810 SOX11P35716 441 aa5.92□□□□□ -1.46
PRPF38B-205ENST00000485810 GRIK4Q16099 956 aa5.92□□□□□ -1.46
PRPF38B-205ENST00000485810 HDGFL1Q5TGJ6 251 aa5.92□□□□□ -1.46
PRPF38B-205ENST00000485810 UBE2Q2Q8WVN8 375 aa5.92□□□□□ -1.46
PRPF38B-205ENST00000485810 TNFRSF25Q93038 417 aa5.92□□□□□ -1.46
PRPF38B-205ENST00000485810 MROH2BQ7Z745 1585 aa5.91□□□□□ -1.46
PRPF38B-205ENST00000485810 CECR2Q9BXF3 1484 aa5.91□□□□□ -1.46
PRPF38B-205ENST00000485810 ALAS2P22557 587 aa5.91□□□□□ -1.46
PRPF38B-205ENST00000485810 GTF2IP78347 998 aa5.91□□□□□ -1.46
PRPF38B-205ENST00000485810 NCOA4Q13772 614 aa5.91□□□□□ -1.46
PRPF38B-205ENST00000485810 WWC1Q8IX03 1113 aa5.91□□□□□ -1.46
PRPF38B-205ENST00000485810 TNS4Q8IZW8 715 aa5.91□□□□□ -1.46
PRPF38B-205ENST00000485810 PUS7Q96PZ0 661 aaKnown RBP5.91□□□□□ -1.46
PRPF38B-205ENST00000485810 BAZ1AQ9NRL2 1556 aaPredicted RBP5.9□□□□□ -1.46
PRPF38B-205ENST00000485810 ZBTB7BO15156 539 aaPredicted RBP5.9□□□□□ -1.47
PRPF38B-205ENST00000485810 RAB44Q7Z6P3 723 aaPredicted RBP5.9□□□□□ -1.47
PRPF38B-205ENST00000485810 SLC9A9Q8IVB4 645 aa5.9□□□□□ -1.47
PRPF38B-205ENST00000485810 EIF4G1Q04637 1599 aaKnown RBP5.89□□□□□ -1.47
PRPF38B-205ENST00000485810 BACH1O14867 736 aa5.89□□□□□ -1.47
PRPF38B-205ENST00000485810 ZEB1P37275 1124 aaPredicted RBP5.89□□□□□ -1.47
PRPF38B-205ENST00000485810 SPEM2Q0P670 501 aa5.89□□□□□ -1.47
PRPF38B-205ENST00000485810 EML3Q32P44 896 aa5.89□□□□□ -1.47
PRPF38B-205ENST00000485810 PRRT3Q5FWE3 981 aa5.89□□□□□ -1.47
PRPF38B-205ENST00000485810 PRSS36Q5K4E3 855 aa5.89□□□□□ -1.47
PRPF38B-205ENST00000485810 ARTNQ5T4W7 220 aa5.89□□□□□ -1.47
PRPF38B-205ENST00000485810 POTEAQ6S8J7 498 aa5.89□□□□□ -1.47
PRPF38B-205ENST00000485810 ILDR2Q71H61 639 aa5.89□□□□□ -1.47
PRPF38B-205ENST00000485810 UCN2Q96RP3 112 aa5.89□□□□□ -1.47
PRPF38B-205ENST00000485810 KIAA1024Q9UPX6 916 aa5.89□□□□□ -1.47
PRPF38B-205ENST00000485810 SPDYE3A6NKU9 549 aa5.88□□□□□ -1.47
PRPF38B-205ENST00000485810 USP17L5A8MUK1 530 aa5.88□□□□□ -1.47
PRPF38B-205ENST00000485810 APBA3O96018 575 aa5.88□□□□□ -1.47
PRPF38B-205ENST00000485810 SELPP16109 830 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms