RNA–Protein interactions for RNA: ENST00000485796.5

HDAC7-223, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 724 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-223ENST00000485796 C4AP0C0L4 1744 aa16.27■□□□□ 0.19
HDAC7-223ENST00000485796 MAP3K15Q6ZN16 1313 aa16.26■□□□□ 0.19
HDAC7-223ENST00000485796 QSER1Q2KHR3 1735 aa16.26■□□□□ 0.19
HDAC7-223ENST00000485796 ZPR1O75312 459 aa16.26■□□□□ 0.19
HDAC7-223ENST00000485796 FLIIQ13045 1269 aa16.26■□□□□ 0.19
HDAC7-223ENST00000485796 ALDH1L2Q3SY69 923 aa16.26■□□□□ 0.19
HDAC7-223ENST00000485796 ZNF428Q96B54 188 aa16.26■□□□□ 0.19
HDAC7-223ENST00000485796 CACNA1FO60840 1977 aa16.26■□□□□ 0.19
HDAC7-223ENST00000485796 KIF6Q6ZMV9 814 aa16.25■□□□□ 0.19
HDAC7-223ENST00000485796 ANKRD13DQ6ZTN6 518 aa16.25■□□□□ 0.19
HDAC7-223ENST00000485796 NPM2Q86SE8 214 aaKnown RBP16.25■□□□□ 0.19
HDAC7-223ENST00000485796 CHMP4AQ9BY43 222 aa16.25■□□□□ 0.19
HDAC7-223ENST00000485796 TNNQ9UQP3 1299 aa16.25■□□□□ 0.19
HDAC7-223ENST00000485796 F6X3S4 739 aa16.24■□□□□ 0.19
HDAC7-223ENST00000485796 TBC1D9BQ66K14 1250 aa16.24■□□□□ 0.19
HDAC7-223ENST00000485796 BICDL1Q6ZP65 573 aa16.24■□□□□ 0.19
HDAC7-223ENST00000485796 NOB1Q9ULX3 412 aaKnown RBP16.24■□□□□ 0.19
HDAC7-223ENST00000485796 ADCY9O60503 1353 aa16.24■□□□□ 0.19
HDAC7-223ENST00000485796 PI4KAP2A4QPH2 592 aa16.23■□□□□ 0.19
HDAC7-223ENST00000485796 DDR1Q08345 913 aa16.23■□□□□ 0.19
HDAC7-223ENST00000485796 NFIXQ14938 502 aa16.23■□□□□ 0.19
HDAC7-223ENST00000485796 PI4KAP1Q8N8J0 262 aa16.23■□□□□ 0.19
HDAC7-223ENST00000485796 PLBD2Q8NHP8 589 aa16.23■□□□□ 0.19
HDAC7-223ENST00000485796 ERVV-1B6SEH8 477 aa16.22■□□□□ 0.19
HDAC7-223ENST00000485796 TM4SF1P30408 202 aa16.22■□□□□ 0.19
HDAC7-223ENST00000485796 FKBP5Q13451 457 aaPredicted RBP16.22■□□□□ 0.19
HDAC7-223ENST00000485796 KSR2Q6VAB6 950 aa16.22■□□□□ 0.19
HDAC7-223ENST00000485796 SLC16A10Q8TF71 515 aa16.22■□□□□ 0.19
HDAC7-223ENST00000485796 MTFR1LQ9H019 292 aa16.22■□□□□ 0.19
HDAC7-223ENST00000485796 RCAN3Q9UKA8 241 aa16.22■□□□□ 0.19
HDAC7-223ENST00000485796 MAP3K2Q9Y2U5 619 aa16.22■□□□□ 0.19
HDAC7-223ENST00000485796 ATP5J2-PTCD1G3V325 749 aa16.21■□□□□ 0.19
HDAC7-223ENST00000485796 GPTP24298 496 aa16.21■□□□□ 0.19
HDAC7-223ENST00000485796 PTGER2P43116 358 aa16.21■□□□□ 0.19
HDAC7-223ENST00000485796 BRPF1P55201 1214 aaPredicted RBP16.21■□□□□ 0.19
HDAC7-223ENST00000485796 GIGYF2Q6Y7W6 1299 aaKnown RBP16.21■□□□□ 0.19
HDAC7-223ENST00000485796 RIC3Q7Z5B4 369 aa16.21■□□□□ 0.19
HDAC7-223ENST00000485796 SGIP1Q9BQI5 828 aa16.21■□□□□ 0.19
HDAC7-223ENST00000485796 MMP10P09238 476 aa16.2■□□□□ 0.18
HDAC7-223ENST00000485796 ZNF34Q8IZ26 560 aa16.2■□□□□ 0.18
HDAC7-223ENST00000485796 NLGN1Q8N2Q7 840 aa16.2■□□□□ 0.18
HDAC7-223ENST00000485796 MYD88Q99836 296 aa16.2■□□□□ 0.18
HDAC7-223ENST00000485796 SCN7AQ01118 1682 aa16.2■□□□□ 0.18
HDAC7-223ENST00000485796 BCORQ6W2J9 1755 aa16.2■□□□□ 0.18
HDAC7-223ENST00000485796 UBN2Q6ZU65 1347 aa16.19■□□□□ 0.18
HDAC7-223ENST00000485796 FAM177BA6PVY3 158 aa16.19■□□□□ 0.18
HDAC7-223ENST00000485796 PLIN1O60240 522 aa16.19■□□□□ 0.18
HDAC7-223ENST00000485796 TCIRG1Q13488 830 aa16.19■□□□□ 0.18
HDAC7-223ENST00000485796 CLEC4GQ6UXB4 293 aa16.19■□□□□ 0.18
HDAC7-223ENST00000485796 CCDC24Q8N4L8 307 aa16.19■□□□□ 0.18
HDAC7-223ENST00000485796 FRAT1Q92837 279 aaPredicted RBP16.19■□□□□ 0.18
HDAC7-223ENST00000485796 ISCA1Q9BUE6 129 aa16.19■□□□□ 0.18
HDAC7-223ENST00000485796 METTL22Q9BUU2 404 aaPredicted RBP16.19■□□□□ 0.18
HDAC7-223ENST00000485796 NIP7Q9Y221 180 aaKnown RBP eCLIP16.19■□□□□ 0.18
HDAC7-223ENST00000485796 POLRMTO00411 1230 aaKnown RBP16.18■□□□□ 0.18
HDAC7-223ENST00000485796 DDX58O95786 925 aaKnown RBP16.18■□□□□ 0.18
HDAC7-223ENST00000485796 IGKV5-2P06315 115 aa16.18■□□□□ 0.18
HDAC7-223ENST00000485796 DNAAF4Q8WXU2 420 aa16.18■□□□□ 0.18
HDAC7-223ENST00000485796 NUP98P52948 1817 aa16.17■□□□□ 0.18
HDAC7-223ENST00000485796 CWF19L2Q2TBE0 894 aaKnown RBP16.17■□□□□ 0.18
HDAC7-223ENST00000485796 SUSD4Q5VX71 490 aa16.17■□□□□ 0.18
HDAC7-223ENST00000485796 JARID2Q92833 1246 aaPredicted RBP16.17■□□□□ 0.18
HDAC7-223ENST00000485796 ZNF652Q9Y2D9 606 aa16.17■□□□□ 0.18
HDAC7-223ENST00000485796 CENPBP07199 599 aaPredicted RBP16.16■□□□□ 0.18
HDAC7-223ENST00000485796 SLC4A10Q6U841 1118 aa16.16■□□□□ 0.18
HDAC7-223ENST00000485796 NLRP10Q86W26 655 aa16.16■□□□□ 0.18
HDAC7-223ENST00000485796 SYNE4Q8N205 404 aa16.16■□□□□ 0.18
HDAC7-223ENST00000485796 SETDB2Q96T68 719 aa16.16■□□□□ 0.18
HDAC7-223ENST00000485796 ATP10DQ9P241 1426 aa16.16■□□□□ 0.18
HDAC7-223ENST00000485796 PTPRCP08575 1304 aa16.16■□□□□ 0.18
HDAC7-223ENST00000485796 ARFGEF2Q9Y6D5 1785 aa16.15■□□□□ 0.18
HDAC7-223ENST00000485796 RGL2O15211 777 aa16.15■□□□□ 0.18
HDAC7-223ENST00000485796 SERPINB2P05120 415 aa16.15■□□□□ 0.18
HDAC7-223ENST00000485796 TRIM27P14373 513 aa16.15■□□□□ 0.18
HDAC7-223ENST00000485796 BEND3Q5T5X7 828 aa16.15■□□□□ 0.18
HDAC7-223ENST00000485796 CLUAP1Q96AJ1 413 aa16.15■□□□□ 0.18
HDAC7-223ENST00000485796 SPON1Q9HCB6 807 aa16.15■□□□□ 0.18
HDAC7-223ENST00000485796 SRCAPQ6ZRS2 3230 aa16.15■□□□□ 0.18
HDAC7-223ENST00000485796 RLBP1P12271 317 aa16.14■□□□□ 0.17
HDAC7-223ENST00000485796 HSP90AB3PQ58FF7 597 aa16.14■□□□□ 0.17
HDAC7-223ENST00000485796 ATF7IPQ6VMQ6 1270 aa16.14■□□□□ 0.17
HDAC7-223ENST00000485796 NUTM1Q86Y26 1132 aa16.14■□□□□ 0.17
HDAC7-223ENST00000485796 PARP3Q9Y6F1 533 aa16.14■□□□□ 0.17
HDAC7-223ENST00000485796 COL24A1Q17RW2 1714 aa16.14■□□□□ 0.17
HDAC7-223ENST00000485796 NEURL1BA8MQ27 555 aa16.13■□□□□ 0.17
HDAC7-223ENST00000485796 NTSR2O95665 410 aa16.13■□□□□ 0.17
HDAC7-223ENST00000485796 TRIM28Q13263 835 aaKnown RBP16.13■□□□□ 0.17
HDAC7-223ENST00000485796 ZKSCAN2Q63HK3 967 aa16.13■□□□□ 0.17
HDAC7-223ENST00000485796 PRR5LQ6MZQ0 368 aa16.13■□□□□ 0.17
HDAC7-223ENST00000485796 ARHGAP45Q92619 1136 aa16.13■□□□□ 0.17
HDAC7-223ENST00000485796 API5Q9BZZ5 524 aaKnown RBP16.13■□□□□ 0.17
HDAC7-223ENST00000485796 KIF16BQ96L93 1317 aa16.13■□□□□ 0.17
HDAC7-223ENST00000485796 CARMIL3Q8ND23 1372 aa16.13■□□□□ 0.17
HDAC7-223ENST00000485796 POLD1P28340 1107 aa16.12■□□□□ 0.17
HDAC7-223ENST00000485796 ERFEQ4G0M1 354 aa16.12■□□□□ 0.17
HDAC7-223ENST00000485796 RTL5Q5HYW3 569 aaPredicted RBP16.12■□□□□ 0.17
HDAC7-223ENST00000485796 C20orf194Q5TEA3 1177 aa16.12■□□□□ 0.17
HDAC7-223ENST00000485796 NBPF5PQ86XG9 351 aaPredicted RBP16.12■□□□□ 0.17
HDAC7-223ENST00000485796 PANK1Q8TE04 598 aa16.12■□□□□ 0.17
HDAC7-223ENST00000485796 IPO8O15397 1037 aaKnown RBP16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms