RNA–Protein interactions for RNA: ENST00000485737.1

SMARCC1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-206ENST00000485737 WDR63Q8IWG1 891 aa5.94□□□□□ -1.46
SMARCC1-206ENST00000485737 WWC1Q8IX03 1113 aa5.94□□□□□ -1.46
SMARCC1-206ENST00000485737 CARD14Q9BXL6 1004 aa5.94□□□□□ -1.46
SMARCC1-206ENST00000485737 RRAGDQ9NQL2 400 aaPredicted RBP5.94□□□□□ -1.46
SMARCC1-206ENST00000485737 ZCCHC11Q5TAX3 1644 aaKnown RBP5.94□□□□□ -1.46
SMARCC1-206ENST00000485737 ABCA9Q8IUA7 1624 aa5.94□□□□□ -1.46
SMARCC1-206ENST00000485737 PPRC1Q5VV67 1664 aaKnown RBP5.94□□□□□ -1.46
SMARCC1-206ENST00000485737 ATP7AQ04656 1500 aa5.94□□□□□ -1.46
SMARCC1-206ENST00000485737 NSD2O96028 1365 aa5.93□□□□□ -1.46
SMARCC1-206ENST00000485737 ADGRB1O14514 1584 aa5.93□□□□□ -1.46
SMARCC1-206ENST00000485737 POTECB2RU33 542 aa5.93□□□□□ -1.46
SMARCC1-206ENST00000485737 CT47B1P0C2W7 299 aaPredicted RBP5.93□□□□□ -1.46
SMARCC1-206ENST00000485737 USP17L8P0C7I0 530 aa5.93□□□□□ -1.46
SMARCC1-206ENST00000485737 RFC5P40937 340 aa5.93□□□□□ -1.46
SMARCC1-206ENST00000485737 RARSP54136 660 aaKnown RBP5.93□□□□□ -1.46
SMARCC1-206ENST00000485737 CCDC146Q8IYE0 955 aa5.93□□□□□ -1.46
SMARCC1-206ENST00000485737 MROH2AA6NES4 1674 aa5.93□□□□□ -1.46
SMARCC1-206ENST00000485737 CFAP74Q9C0B2 1584 aa5.93□□□□□ -1.46
SMARCC1-206ENST00000485737 ARHGAP31Q2M1Z3 1444 aa5.92□□□□□ -1.46
SMARCC1-206ENST00000485737 NSD3Q9BZ95 1437 aa5.92□□□□□ -1.46
SMARCC1-206ENST00000485737 QRICH2Q9H0J4 1663 aa5.92□□□□□ -1.46
SMARCC1-206ENST00000485737 GOLGA6L3A6NEY3 463 aa5.92□□□□□ -1.46
SMARCC1-206ENST00000485737 CANXP27824 592 aaKnown RBP5.92□□□□□ -1.46
SMARCC1-206ENST00000485737 MCM4P33991 863 aa5.92□□□□□ -1.46
SMARCC1-206ENST00000485737 DDIT3P35638 169 aa5.92□□□□□ -1.46
SMARCC1-206ENST00000485737 C4orf48Q5BLP8 95 aa5.92□□□□□ -1.46
SMARCC1-206ENST00000485737 LCE2AQ5TA79 106 aaPredicted RBP5.92□□□□□ -1.46
SMARCC1-206ENST00000485737 EFCAB2Q5VUJ9 269 aa5.92□□□□□ -1.46
SMARCC1-206ENST00000485737 NPAS3Q8IXF0 933 aa5.92□□□□□ -1.46
SMARCC1-206ENST00000485737 PANK1Q8TE04 598 aa5.92□□□□□ -1.46
SMARCC1-206ENST00000485737 SLC16A10Q8TF71 515 aa5.92□□□□□ -1.46
SMARCC1-206ENST00000485737 RUNDC1Q96C34 613 aa5.92□□□□□ -1.46
SMARCC1-206ENST00000485737 GOPCQ9HD26 462 aa5.92□□□□□ -1.46
SMARCC1-206ENST00000485737 CHMP5Q9NZZ3 219 aa5.92□□□□□ -1.46
SMARCC1-206ENST00000485737 GMPR2Q9P2T1 348 aaKnown RBP5.92□□□□□ -1.46
SMARCC1-206ENST00000485737 COG6Q9Y2V7 657 aa5.92□□□□□ -1.46
SMARCC1-206ENST00000485737 CHD1O14646 1710 aa5.91□□□□□ -1.46
SMARCC1-206ENST00000485737 COL3A1P02461 1466 aaPredicted RBP5.91□□□□□ -1.46
SMARCC1-206ENST00000485737 KIF1BO60333 1816 aa5.91□□□□□ -1.46
SMARCC1-206ENST00000485737 XRCC6P12956 609 aaKnown RBP eCLIP5.91□□□□□ -1.46
SMARCC1-206ENST00000485737 MRE11P49959 708 aa5.91□□□□□ -1.46
SMARCC1-206ENST00000485737 NNTQ13423 1086 aa5.91□□□□□ -1.46
SMARCC1-206ENST00000485737 HDAC1Q13547 482 aaPredicted RBP5.91□□□□□ -1.46
SMARCC1-206ENST00000485737 PUS7Q96PZ0 661 aaKnown RBP5.91□□□□□ -1.46
SMARCC1-206ENST00000485737 RWDD1Q9H446 243 aaPredicted RBP5.91□□□□□ -1.46
SMARCC1-206ENST00000485737 FKBPLQ9UIM3 349 aa5.91□□□□□ -1.46
SMARCC1-206ENST00000485737 CDC42BPGQ6DT37 1551 aa5.91□□□□□ -1.46
SMARCC1-206ENST00000485737 MED14O60244 1454 aa5.9□□□□□ -1.46
SMARCC1-206ENST00000485737 UGGT1Q9NYU2 1555 aa5.9□□□□□ -1.46
SMARCC1-206ENST00000485737 CAPN5O15484 640 aaPredicted RBP5.9□□□□□ -1.46
SMARCC1-206ENST00000485737 RLBP1P12271 317 aa5.9□□□□□ -1.46
SMARCC1-206ENST00000485737 PTMSP20962 102 aa5.9□□□□□ -1.46
SMARCC1-206ENST00000485737 MVPQ14764 893 aaKnown RBP5.9□□□□□ -1.46
SMARCC1-206ENST00000485737 EPS8L1Q8TE68 723 aa5.9□□□□□ -1.46
SMARCC1-206ENST00000485737 SNX21Q969T3 373 aa5.9□□□□□ -1.46
SMARCC1-206ENST00000485737 ARHGAP9Q9BRR9 750 aa5.9□□□□□ -1.46
SMARCC1-206ENST00000485737 SLKQ9H2G2 1235 aaPredicted RBP5.9□□□□□ -1.46
SMARCC1-206ENST00000485737 HMX1Q9NP08 348 aaPredicted RBP5.9□□□□□ -1.46
SMARCC1-206ENST00000485737 ATP13A2Q9NQ11 1180 aa5.9□□□□□ -1.46
SMARCC1-206ENST00000485737 SPAG9O60271 1321 aaKnown RBP5.9□□□□□ -1.47
SMARCC1-206ENST00000485737 ABCC11Q96J66 1382 aa5.9□□□□□ -1.47
SMARCC1-206ENST00000485737 PPLO60437 1756 aa5.9□□□□□ -1.47
SMARCC1-206ENST00000485737 NOS1P29475 1434 aa5.9□□□□□ -1.47
SMARCC1-206ENST00000485737 EIF5BO60841 1220 aaKnown RBP5.89□□□□□ -1.47
SMARCC1-206ENST00000485737 ADH1CP00326 375 aa5.89□□□□□ -1.47
SMARCC1-206ENST00000485737 BMP1P13497 986 aa5.89□□□□□ -1.47
SMARCC1-206ENST00000485737 RBM25P49756 843 aaKnown RBP5.89□□□□□ -1.47
SMARCC1-206ENST00000485737 VASH1Q7L8A9 365 aaPredicted RBP5.89□□□□□ -1.47
SMARCC1-206ENST00000485737 SH3BP5LQ7L8J4 393 aa5.89□□□□□ -1.47
SMARCC1-206ENST00000485737 SMC5Q8IY18 1101 aa5.89□□□□□ -1.47
SMARCC1-206ENST00000485737 PNMA1Q8ND90 353 aa5.89□□□□□ -1.47
SMARCC1-206ENST00000485737 GPKOWQ92917 476 aaPredicted RBP eCLIP5.89□□□□□ -1.475e-6■□□□□ 9.6
SMARCC1-206ENST00000485737 C22orf23Q9BZE7 217 aa5.89□□□□□ -1.47
SMARCC1-206ENST00000485737 PNNQ9H307 717 aaKnown RBP5.89□□□□□ -1.47
SMARCC1-206ENST00000485737 MYH16Q9H6N6 1097 aa5.89□□□□□ -1.47
SMARCC1-206ENST00000485737 IL16Q14005 1332 aa5.89□□□□□ -1.47
SMARCC1-206ENST00000485737 IBTKQ9P2D0 1353 aaPredicted RBP5.89□□□□□ -1.47
SMARCC1-206ENST00000485737 YEATS2Q9ULM3 1422 aa5.89□□□□□ -1.47
SMARCC1-206ENST00000485737 TULP4Q9NRJ4 1543 aa5.89□□□□□ -1.47
SMARCC1-206ENST00000485737 ERCC6L2Q5T890 1561 aa5.89□□□□□ -1.47
SMARCC1-206ENST00000485737 HECW2Q9P2P5 1572 aa5.89□□□□□ -1.47
SMARCC1-206ENST00000485737 PIK3C2BO00750 1634 aa5.88□□□□□ -1.47
SMARCC1-206ENST00000485737 ANKRD26Q9UPS8 1709 aa5.88□□□□□ -1.47
SMARCC1-206ENST00000485737 RRP9O43818 475 aaKnown RBP5.88□□□□□ -1.47
SMARCC1-206ENST00000485737 TRAK2O60296 914 aa5.88□□□□□ -1.47
SMARCC1-206ENST00000485737 FSHRP23945 695 aa5.88□□□□□ -1.47
SMARCC1-206ENST00000485737 WDR4P57081 412 aaKnown RBP5.88□□□□□ -1.47
SMARCC1-206ENST00000485737 GLIPR1L2Q4G1C9 344 aa5.88□□□□□ -1.47
SMARCC1-206ENST00000485737 TMEM259Q4ZIN3 620 aa5.88□□□□□ -1.47
SMARCC1-206ENST00000485737 ZKSCAN2Q63HK3 967 aa5.88□□□□□ -1.47
SMARCC1-206ENST00000485737 PDXDC2PQ6P474 469 aa5.88□□□□□ -1.47
SMARCC1-206ENST00000485737 SH3RF1Q7Z6J0 888 aa5.88□□□□□ -1.47
SMARCC1-206ENST00000485737 ZBTB33Q86T24 672 aa5.88□□□□□ -1.47
SMARCC1-206ENST00000485737 TCP11L2Q8N4U5 519 aa5.88□□□□□ -1.47
SMARCC1-206ENST00000485737 MPNDQ8N594 471 aa5.88□□□□□ -1.47
SMARCC1-206ENST00000485737 KIF16BQ96L93 1317 aa5.88□□□□□ -1.47
SMARCC1-206ENST00000485737 ANKRD36BQ8N2N9 1353 aa5.88□□□□□ -1.47
SMARCC1-206ENST00000485737 PPIP5K1Q6PFW1 1433 aa5.88□□□□□ -1.47
SMARCC1-206ENST00000485737 GLI2P10070 1586 aa5.88□□□□□ -1.47
SMARCC1-206ENST00000485737 ARHGEF28Q8N1W1 1705 aaKnown RBP5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms