RNA–Protein interactions for RNA: ENST00000484178.5

SSBP1-211, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSBP1, Length 676 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-211ENST00000484178 HOMEZQ8IX15 550 aa7.99□□□□□ -1.13
SSBP1-211ENST00000484178 PARP3Q9Y6F1 533 aa7.99□□□□□ -1.13
SSBP1-211ENST00000484178 HIRAP54198 1017 aaPredicted RBP7.98□□□□□ -1.13
SSBP1-211ENST00000484178 TRIM50Q86XT4 487 aa7.98□□□□□ -1.13
SSBP1-211ENST00000484178 SLC9A9Q8IVB4 645 aa7.98□□□□□ -1.13
SSBP1-211ENST00000484178 PLEKHM2Q8IWE5 1019 aa7.98□□□□□ -1.13
SSBP1-211ENST00000484178 TNFRSF25Q93038 417 aa7.98□□□□□ -1.13
SSBP1-211ENST00000484178 PRDM6Q9NQX0 595 aa7.98□□□□□ -1.13
SSBP1-211ENST00000484178 SPDYE3A6NKU9 549 aa7.97□□□□□ -1.13
SSBP1-211ENST00000484178 USP17L5A8MUK1 530 aa7.97□□□□□ -1.13
SSBP1-211ENST00000484178 ALAS2P22557 587 aa7.97□□□□□ -1.13
SSBP1-211ENST00000484178 C1orf53Q5VUE5 145 aa7.97□□□□□ -1.13
SSBP1-211ENST00000484178 SYT9Q86SS6 491 aa7.97□□□□□ -1.13
SSBP1-211ENST00000484178 C14orf37Q86TY3 774 aa7.97□□□□□ -1.13
SSBP1-211ENST00000484178 PLVAPQ9BX97 442 aa7.97□□□□□ -1.13
SSBP1-211ENST00000484178 SERTM1A2A2V5 107 aa7.96□□□□□ -1.14
SSBP1-211ENST00000484178 M0R2N6 131 aa7.96□□□□□ -1.14
SSBP1-211ENST00000484178 Q8N3U1 123 aa7.96□□□□□ -1.14
SSBP1-211ENST00000484178 ZBTB7BO15156 539 aaPredicted RBP7.95□□□□□ -1.14
SSBP1-211ENST00000484178 ATP1A2P50993 1020 aa7.95□□□□□ -1.14
SSBP1-211ENST00000484178 KCNQ4P56696 695 aa7.95□□□□□ -1.14
SSBP1-211ENST00000484178 PSME1Q06323 249 aa7.95□□□□□ -1.14
SSBP1-211ENST00000484178 LRRC69Q6ZNQ3 347 aa7.95□□□□□ -1.14
SSBP1-211ENST00000484178 ITGB7P26010 798 aa7.94□□□□□ -1.14
SSBP1-211ENST00000484178 GATA4P43694 442 aa7.94□□□□□ -1.14
SSBP1-211ENST00000484178 PSMA6P60900 246 aaKnown RBP7.94□□□□□ -1.14
SSBP1-211ENST00000484178 COL9A3Q14050 684 aaPredicted RBP7.94□□□□□ -1.14
SSBP1-211ENST00000484178 TNS4Q8IZW8 715 aa7.94□□□□□ -1.14
SSBP1-211ENST00000484178 SFSWAPQ12872 951 aaKnown RBP7.93□□□□□ -1.14
SSBP1-211ENST00000484178 NEUROD4Q9HD90 331 aa7.93□□□□□ -1.14
SSBP1-211ENST00000484178 ANKIB1Q9P2G1 1089 aa7.93□□□□□ -1.14
SSBP1-211ENST00000484178 ZNF232Q9UNY5 417 aa7.93□□□□□ -1.14
SSBP1-211ENST00000484178 NEUROD1Q13562 356 aa7.92□□□□□ -1.14
SSBP1-211ENST00000484178 CCDC102BQ68D86 513 aa7.92□□□□□ -1.14
SSBP1-211ENST00000484178 DEPDC4Q8N2C3 294 aa7.92□□□□□ -1.14
SSBP1-211ENST00000484178 LARGE2Q8N3Y3 721 aa7.92□□□□□ -1.14
SSBP1-211ENST00000484178 TPCN2Q8NHX9 752 aa7.92□□□□□ -1.14
SSBP1-211ENST00000484178 SLC30A3Q99726 388 aa7.92□□□□□ -1.14
SSBP1-211ENST00000484178 PRRT3Q5FWE3 981 aa7.91□□□□□ -1.14
SSBP1-211ENST00000484178 STAG2Q8N3U4 1231 aa7.91□□□□□ -1.14
SSBP1-211ENST00000484178 RHPN1Q8TCX5 695 aa7.91□□□□□ -1.14
SSBP1-211ENST00000484178 ADAMTS19Q8TE59 1207 aa7.91□□□□□ -1.14
SSBP1-211ENST00000484178 POM121Q96HA1 1249 aa7.91□□□□□ -1.14
SSBP1-211ENST00000484178 KIAA1024Q9UPX6 916 aa7.91□□□□□ -1.14
SSBP1-211ENST00000484178 STARD13Q9Y3M8 1113 aa7.91□□□□□ -1.14
SSBP1-211ENST00000484178 USP17L3A6NCW0 530 aa7.9□□□□□ -1.14
SSBP1-211ENST00000484178 USP17L4A6NCW7 530 aa7.9□□□□□ -1.14
SSBP1-211ENST00000484178 RAD21O60216 631 aa7.9□□□□□ -1.14
SSBP1-211ENST00000484178 CLDN10P78369 228 aa7.9□□□□□ -1.14
SSBP1-211ENST00000484178 SPEM2Q0P670 501 aa7.9□□□□□ -1.14
SSBP1-211ENST00000484178 FLIIQ13045 1269 aa7.9□□□□□ -1.14
SSBP1-211ENST00000484178 DOC2BQ14184 412 aa7.9□□□□□ -1.14
SSBP1-211ENST00000484178 TBCELQ5QJ74 424 aa7.9□□□□□ -1.14
SSBP1-211ENST00000484178 SH3PXD2AQ5TCZ1 1133 aa7.9□□□□□ -1.14
SSBP1-211ENST00000484178 USP17L2Q6R6M4 530 aa7.9□□□□□ -1.14
SSBP1-211ENST00000484178 USP17L1Q7RTZ2 530 aa7.9□□□□□ -1.14
SSBP1-211ENST00000484178 SIX5Q8N196 739 aa7.9□□□□□ -1.14
SSBP1-211ENST00000484178 MICALL1Q8N3F8 863 aa7.9□□□□□ -1.14
SSBP1-211ENST00000484178 EFCC1Q9HA90 598 aa7.9□□□□□ -1.14
SSBP1-211ENST00000484178 CHMP3Q9Y3E7 222 aa7.9□□□□□ -1.14
SSBP1-211ENST00000484178 PALM3A6NDB9 673 aaPredicted RBP7.89□□□□□ -1.15
SSBP1-211ENST00000484178 M0R082 166 aa7.89□□□□□ -1.15
SSBP1-211ENST00000484178 ATP9BO43861 1147 aa7.89□□□□□ -1.15
SSBP1-211ENST00000484178 NID1P14543 1247 aa7.89□□□□□ -1.15
SSBP1-211ENST00000484178 NKAPLQ5M9Q1 402 aa7.89□□□□□ -1.15
SSBP1-211ENST00000484178 C20orf204Q6ZNR8 217 aa7.89□□□□□ -1.15
SSBP1-211ENST00000484178 ZNF417Q8TAU3 575 aa7.89□□□□□ -1.15
SSBP1-211ENST00000484178 UCN2Q96RP3 112 aa7.89□□□□□ -1.15
SSBP1-211ENST00000484178 ZNF587Q96SQ5 575 aaPredicted RBP7.89□□□□□ -1.15
SSBP1-211ENST00000484178 TSPAN10Q9H1Z9 355 aaPredicted RBP7.89□□□□□ -1.15
SSBP1-211ENST00000484178 BRD7Q9NPI1 651 aa7.89□□□□□ -1.15
SSBP1-211ENST00000484178 DKK1O94907 266 aa7.88□□□□□ -1.15
SSBP1-211ENST00000484178 TYRO3Q06418 890 aa7.88□□□□□ -1.15
SSBP1-211ENST00000484178 RSPO4Q2I0M5 234 aaPredicted RBP7.88□□□□□ -1.15
SSBP1-211ENST00000484178 GAS2L2Q8NHY3 880 aa7.88□□□□□ -1.15
SSBP1-211ENST00000484178 NACC1Q96RE7 527 aa7.88□□□□□ -1.15
SSBP1-211ENST00000484178 PHACTR1Q9C0D0 580 aa7.88□□□□□ -1.15
SSBP1-211ENST00000484178 SEMA6BQ9H3T3 888 aa7.88□□□□□ -1.15
SSBP1-211ENST00000484178 KCNH4Q9UQ05 1017 aa7.88□□□□□ -1.15
SSBP1-211ENST00000484178 POM121CA8CG34 1229 aa7.87□□□□□ -1.15
SSBP1-211ENST00000484178 ALBP02768 609 aa7.87□□□□□ -1.15
SSBP1-211ENST00000484178 ADH7P40394 386 aa7.87□□□□□ -1.15
SSBP1-211ENST00000484178 HIF1AQ16665 826 aa7.87□□□□□ -1.15
SSBP1-211ENST00000484178 OGFOD1Q8N543 542 aa7.87□□□□□ -1.15
SSBP1-211ENST00000484178 CCDC180Q9P1Z9 1646 aa7.86□□□□□ -1.15
SSBP1-211ENST00000484178 C21orf2O43822 256 aa7.86□□□□□ -1.15
SSBP1-211ENST00000484178 APBA3O96018 575 aa7.86□□□□□ -1.15
SSBP1-211ENST00000484178 SUSD3Q96L08 255 aa7.86□□□□□ -1.15
SSBP1-211ENST00000484178 CEP63Q96MT8 703 aa7.86□□□□□ -1.15
SSBP1-211ENST00000484178 MKRN1Q9UHC7 482 aaKnown RBP7.86□□□□□ -1.15
SSBP1-211ENST00000484178 TRIM28Q13263 835 aaKnown RBP7.85□□□□□ -1.15
SSBP1-211ENST00000484178 HDGFL1Q5TGJ6 251 aa7.85□□□□□ -1.15
SSBP1-211ENST00000484178 HSH2DQ96JZ2 352 aa7.85□□□□□ -1.15
SSBP1-211ENST00000484178 TPSG1Q9NRR2 321 aa7.85□□□□□ -1.15
SSBP1-211ENST00000484178 HCN4Q9Y3Q4 1203 aa7.85□□□□□ -1.15
SSBP1-211ENST00000484178 SFI1A8K8P3 1242 aa7.84□□□□□ -1.15
SSBP1-211ENST00000484178 UBTFP17480 764 aaKnown RBP7.84□□□□□ -1.15
SSBP1-211ENST00000484178 IER5Q5VY09 327 aa7.84□□□□□ -1.15
SSBP1-211ENST00000484178 ZNF280CQ8ND82 737 aa7.84□□□□□ -1.15
SSBP1-211ENST00000484178 C2orf49Q9BVC5 232 aaPredicted RBP7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms