RNA–Protein interactions for RNA: ENST00000481115.2

PKP4-211, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 884 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-211ENST00000481115 HELBQ8NG08 1087 aaPredicted RBP8.7□□□□□ -1.02
PKP4-211ENST00000481115 TNPO1Q92973 898 aaKnown RBP8.7□□□□□ -1.02
PKP4-211ENST00000481115 CDCA7LQ96GN5 454 aa8.7□□□□□ -1.02
PKP4-211ENST00000481115 EYA1Q99502 592 aa8.7□□□□□ -1.02
PKP4-211ENST00000481115 ZFYVE9O95405 1425 aa8.7□□□□□ -1.02
PKP4-211ENST00000481115 NEXMIFQ5QGS0 1516 aa8.7□□□□□ -1.02
PKP4-211ENST00000481115 STRCQ7RTU9 1775 aa8.69□□□□□ -1.02
PKP4-211ENST00000481115 KDM4AO75164 1064 aa8.69□□□□□ -1.02
PKP4-211ENST00000481115 PLCG2P16885 1265 aa8.69□□□□□ -1.02
PKP4-211ENST00000481115 USP46P62068 366 aa8.69□□□□□ -1.02
PKP4-211ENST00000481115 CHAF1AQ13111 956 aaPredicted RBP8.69□□□□□ -1.02
PKP4-211ENST00000481115 PNMA1Q8ND90 353 aa8.69□□□□□ -1.02
PKP4-211ENST00000481115 SREK1Q8WXA9 508 aaKnown RBP8.69□□□□□ -1.02
PKP4-211ENST00000481115 BRMS1Q9HCU9 246 aa8.69□□□□□ -1.02
PKP4-211ENST00000481115 ZMIZ1Q9ULJ6 1067 aa8.69□□□□□ -1.02
PKP4-211ENST00000481115 TMEM2Q9UHN6 1383 aa8.69□□□□□ -1.02
PKP4-211ENST00000481115 SOWAHDA6NJG2 315 aa8.68□□□□□ -1.02
PKP4-211ENST00000481115 PLIN1O60240 522 aa8.68□□□□□ -1.02
PKP4-211ENST00000481115 SSFA2P28290 1259 aa8.68□□□□□ -1.02
PKP4-211ENST00000481115 FOSBP53539 338 aa8.68□□□□□ -1.02
PKP4-211ENST00000481115 SLFN5Q08AF3 891 aa8.68□□□□□ -1.02
PKP4-211ENST00000481115 FKBP5Q13451 457 aaPredicted RBP8.68□□□□□ -1.02
PKP4-211ENST00000481115 NOM1Q5C9Z4 860 aaKnown RBP8.68□□□□□ -1.02
PKP4-211ENST00000481115 ZNF771Q7L3S4 317 aaPredicted RBP8.68□□□□□ -1.02
PKP4-211ENST00000481115 THEMISQ8N1K5 641 aaPredicted RBP8.68□□□□□ -1.02
PKP4-211ENST00000481115 GIPC2Q8TF65 315 aa8.68□□□□□ -1.02
PKP4-211ENST00000481115 STK32AQ8WU08 396 aa8.68□□□□□ -1.02
PKP4-211ENST00000481115 RWDD1Q9H446 243 aaPredicted RBP8.68□□□□□ -1.02
PKP4-211ENST00000481115 PRDM10Q9NQV6 1147 aa8.68□□□□□ -1.02
PKP4-211ENST00000481115 CGNQ9P2M7 1197 aaKnown RBP8.68□□□□□ -1.02
PKP4-211ENST00000481115 MORC2Q9Y6X9 1032 aaPredicted RBP8.68□□□□□ -1.02
PKP4-211ENST00000481115 ATAD2Q6PL18 1390 aa8.68□□□□□ -1.02
PKP4-211ENST00000481115 PIK3C2GO75747 1445 aa8.67□□□□□ -1.02
PKP4-211ENST00000481115 MBD3O95983 291 aa8.67□□□□□ -1.02
PKP4-211ENST00000481115 POTEIP0CG38 1075 aa8.67□□□□□ -1.02
PKP4-211ENST00000481115 FDX1P10109 184 aa8.67□□□□□ -1.02
PKP4-211ENST00000481115 ATN1P54259 1190 aaPredicted RBP8.67□□□□□ -1.02
PKP4-211ENST00000481115 MARSP56192 900 aaKnown RBP8.67□□□□□ -1.02
PKP4-211ENST00000481115 XPCQ01831 940 aaPredicted RBP8.67□□□□□ -1.02
PKP4-211ENST00000481115 LRRN4Q8WUT4 740 aa8.67□□□□□ -1.02
PKP4-211ENST00000481115 SECISBP2LQ93073 1101 aaKnown RBP8.67□□□□□ -1.02
PKP4-211ENST00000481115 CWC22Q9HCG8 908 aaKnown RBP8.67□□□□□ -1.02
PKP4-211ENST00000481115 NOVA2Q9UNW9 492 aaKnown RBP8.67□□□□□ -1.02
PKP4-211ENST00000481115 MED14O60244 1454 aa8.66□□□□□ -1.02
PKP4-211ENST00000481115 RIMS2Q9UQ26 1411 aa8.66□□□□□ -1.02
PKP4-211ENST00000481115 RPGRIP1LQ68CZ1 1315 aa8.66□□□□□ -1.02
PKP4-211ENST00000481115 POTEMA6NI47 508 aa8.66□□□□□ -1.02
PKP4-211ENST00000481115 PER1O15534 1290 aaPredicted RBP8.66□□□□□ -1.02
PKP4-211ENST00000481115 SEC24BO95487 1268 aa8.66□□□□□ -1.02
PKP4-211ENST00000481115 VAMP1P23763 118 aa8.66□□□□□ -1.02
PKP4-211ENST00000481115 DNAJB2P25686 324 aa8.66□□□□□ -1.02
PKP4-211ENST00000481115 CBX1P83916 185 aa8.66□□□□□ -1.02
PKP4-211ENST00000481115 C20orf194Q5TEA3 1177 aa8.66□□□□□ -1.02
PKP4-211ENST00000481115 LRSAM1Q6UWE0 723 aa8.66□□□□□ -1.02
PKP4-211ENST00000481115 ZDHHC16Q969W1 377 aa8.66□□□□□ -1.02
PKP4-211ENST00000481115 DDX49Q9Y6V7 483 aaKnown RBP8.66□□□□□ -1.02
PKP4-211ENST00000481115 MYOM2P54296 1465 aa8.65□□□□□ -1.02
PKP4-211ENST00000481115 HOXA2O43364 376 aa8.65□□□□□ -1.02
PKP4-211ENST00000481115 SLFN14P0C7P3 912 aa8.65□□□□□ -1.02
PKP4-211ENST00000481115 ATP2B3Q16720 1220 aa8.65□□□□□ -1.02
PKP4-211ENST00000481115 IQGAP1P46940 1657 aa8.65□□□□□ -1.03
PKP4-211ENST00000481115 NRXN3Q9Y4C0 1643 aa8.65□□□□□ -1.03
PKP4-211ENST00000481115 SETBP1Q9Y6X0 1596 aa8.65□□□□□ -1.03
PKP4-211ENST00000481115 NRXN1Q9ULB1 1477 aa8.64□□□□□ -1.03
PKP4-211ENST00000481115 LTKP29376 864 aa8.64□□□□□ -1.03
PKP4-211ENST00000481115 KCNJ4P48050 445 aa8.64□□□□□ -1.03
PKP4-211ENST00000481115 HSPA2P54652 639 aa8.64□□□□□ -1.03
PKP4-211ENST00000481115 NOLC1Q14978 699 aaKnown RBP eCLIP8.64□□□□□ -1.03
PKP4-211ENST00000481115 TERF2Q15554 542 aa8.64□□□□□ -1.03
PKP4-211ENST00000481115 CAVIN1Q6NZI2 390 aaKnown RBP8.64□□□□□ -1.03
PKP4-211ENST00000481115 RPAINQ86UA6 219 aa8.64□□□□□ -1.03
PKP4-211ENST00000481115 NFATC2IPQ8NCF5 419 aa8.64□□□□□ -1.03
PKP4-211ENST00000481115 EPS8L1Q8TE68 723 aa8.64□□□□□ -1.03
PKP4-211ENST00000481115 SYAP1Q96A49 352 aaPredicted RBP8.64□□□□□ -1.03
PKP4-211ENST00000481115 DDX41Q9UJV9 622 aaKnown RBP8.64□□□□□ -1.03
PKP4-211ENST00000481115 PCDHGA4Q9Y5G9 962 aa8.64□□□□□ -1.03
PKP4-211ENST00000481115 SETD1AO15047 1707 aaKnown RBP8.63□□□□□ -1.03
PKP4-211ENST00000481115 GPRASP1Q5JY77 1395 aa8.63□□□□□ -1.03
PKP4-211ENST00000481115 TRPM1Q7Z4N2 1603 aa8.63□□□□□ -1.03
PKP4-211ENST00000481115 GALR2O43603 387 aaPredicted RBP8.63□□□□□ -1.03
PKP4-211ENST00000481115 IGHDP01880 384 aa8.63□□□□□ -1.03
PKP4-211ENST00000481115 ZC3H6P61129 1189 aaKnown RBP8.63□□□□□ -1.03
PKP4-211ENST00000481115 MTMR2Q13614 643 aa8.63□□□□□ -1.03
PKP4-211ENST00000481115 ZSCAN23Q3MJ62 389 aa8.63□□□□□ -1.03
PKP4-211ENST00000481115 RNF20Q5VTR2 975 aa8.63□□□□□ -1.03
PKP4-211ENST00000481115 ANKLE2Q86XL3 938 aa8.63□□□□□ -1.03
PKP4-211ENST00000481115 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.63□□□□□ -1.03
PKP4-211ENST00000481115 CHMP4AQ9BY43 222 aa8.63□□□□□ -1.03
PKP4-211ENST00000481115 TMEM134Q9H6X4 195 aa8.63□□□□□ -1.03
PKP4-211ENST00000481115 BCL2L12Q9HB09 334 aa8.63□□□□□ -1.03
PKP4-211ENST00000481115 FAM53CQ9NYF3 392 aa8.63□□□□□ -1.03
PKP4-211ENST00000481115 PCDHGC3Q9UN70 934 aa8.63□□□□□ -1.03
PKP4-211ENST00000481115 PLEKHG1Q9ULL1 1385 aa8.62□□□□□ -1.03
PKP4-211ENST00000481115 ANKRD33BA6NCL7 494 aa8.62□□□□□ -1.03
PKP4-211ENST00000481115 K7ELQ4 463 aaPredicted RBP8.62□□□□□ -1.03
PKP4-211ENST00000481115 BAG4O95429 457 aaKnown RBP8.62□□□□□ -1.03
PKP4-211ENST00000481115 CT47B1P0C2W7 299 aaPredicted RBP8.62□□□□□ -1.03
PKP4-211ENST00000481115 HDGFP51858 240 aaKnown RBP8.62□□□□□ -1.03
PKP4-211ENST00000481115 RGL3Q3MIN7 710 aa8.62□□□□□ -1.03
PKP4-211ENST00000481115 SLFNL1Q499Z3 407 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms