RNA–Protein interactions for RNA: ENST00000480836.5

PTPN7-212, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,189 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-212ENST00000480836 FER1L6Q2WGJ9 1857 aa17.76■□□□□ 0.43
PTPN7-212ENST00000480836 FSTL1Q12841 308 aa17.76■□□□□ 0.43
PTPN7-212ENST00000480836 TAF7Q15545 349 aaPredicted RBP17.76■□□□□ 0.43
PTPN7-212ENST00000480836 C16orf71Q8IYS4 520 aaPredicted RBP17.76■□□□□ 0.43
PTPN7-212ENST00000480836 CNBD1Q8NA66 436 aa17.76■□□□□ 0.43
PTPN7-212ENST00000480836 RTF1Q92541 710 aaKnown RBP17.75■□□□□ 0.43
PTPN7-212ENST00000480836 TNRC6CQ9HCJ0 1690 aaKnown RBP17.74■□□□□ 0.43
PTPN7-212ENST00000480836 FAM177BA6PVY3 158 aa17.74■□□□□ 0.43
PTPN7-212ENST00000480836 HTATSF1O43719 755 aaKnown RBP17.74■□□□□ 0.43
PTPN7-212ENST00000480836 POTEIP0CG38 1075 aa17.74■□□□□ 0.43
PTPN7-212ENST00000480836 POTEJP0CG39 1038 aa17.74■□□□□ 0.43
PTPN7-212ENST00000480836 VEGFAP15692 232 aaPredicted RBP17.74■□□□□ 0.43
PTPN7-212ENST00000480836 PRPF40BQ6NWY9 871 aaKnown RBP17.74■□□□□ 0.43
PTPN7-212ENST00000480836 SLC51AQ86UW1 340 aa17.74■□□□□ 0.43
PTPN7-212ENST00000480836 KLRG1Q96E93 195 aa17.74■□□□□ 0.43
PTPN7-212ENST00000480836 TIAM2Q8IVF5 1701 aa17.74■□□□□ 0.43
PTPN7-212ENST00000480836 ZC3H4Q9UPT8 1303 aaKnown RBP17.73■□□□□ 0.43
PTPN7-212ENST00000480836 KLRG2A4D1S0 409 aaPredicted RBP17.73■□□□□ 0.43
PTPN7-212ENST00000480836 STYK1Q6J9G0 422 aa17.73■□□□□ 0.43
PTPN7-212ENST00000480836 CLEC4GQ6UXB4 293 aa17.73■□□□□ 0.43
PTPN7-212ENST00000480836 DLG5Q8TDM6 1919 aa17.72■□□□□ 0.43
PTPN7-212ENST00000480836 CACNA1SQ13698 1873 aa17.72■□□□□ 0.43
PTPN7-212ENST00000480836 DDNO94850 711 aaPredicted RBP17.72■□□□□ 0.43
PTPN7-212ENST00000480836 ERFEQ4G0M1 354 aa17.72■□□□□ 0.43
PTPN7-212ENST00000480836 NBPF5PQ86XG9 351 aaPredicted RBP17.72■□□□□ 0.43
PTPN7-212ENST00000480836 NGEFQ8N5V2 710 aa17.72■□□□□ 0.43
PTPN7-212ENST00000480836 JMYQ8N9B5 988 aa17.72■□□□□ 0.43
PTPN7-212ENST00000480836 MASTLQ96GX5 879 aa17.72■□□□□ 0.43
PTPN7-212ENST00000480836 EIF4A1P60842 406 aaKnown RBP17.71■□□□□ 0.43
PTPN7-212ENST00000480836 TTLL7Q6ZT98 887 aa17.71■□□□□ 0.43
PTPN7-212ENST00000480836 SMC1BQ8NDV3 1235 aa17.71■□□□□ 0.43
PTPN7-212ENST00000480836 CNKSR1Q969H4 720 aa17.71■□□□□ 0.43
PTPN7-212ENST00000480836 PDZRN3Q9UPQ7 1066 aa17.71■□□□□ 0.43
PTPN7-212ENST00000480836 NIP7Q9Y221 180 aaKnown RBP eCLIP17.71■□□□□ 0.43
PTPN7-212ENST00000480836 ST5P78524 1137 aa17.7■□□□□ 0.42
PTPN7-212ENST00000480836 DICER1Q9UPY3 1922 aaKnown RBP17.7■□□□□ 0.42
PTPN7-212ENST00000480836 LTBP3Q9NS15 1303 aa17.7■□□□□ 0.42
PTPN7-212ENST00000480836 NPM2Q86SE8 214 aaKnown RBP17.69■□□□□ 0.42
PTPN7-212ENST00000480836 TAOK3Q9H2K8 898 aa17.69■□□□□ 0.42
PTPN7-212ENST00000480836 NUTM1Q86Y26 1132 aa17.68■□□□□ 0.42
PTPN7-212ENST00000480836 RRP7AQ9Y3A4 280 aaKnown RBP17.68■□□□□ 0.42
PTPN7-212ENST00000480836 KDM3BQ7LBC6 1761 aa17.68■□□□□ 0.42
PTPN7-212ENST00000480836 NPHP1O15259 732 aa17.67■□□□□ 0.42
PTPN7-212ENST00000480836 NFE2L2Q16236 605 aa17.67■□□□□ 0.42
PTPN7-212ENST00000480836 COL13A1Q5TAT6 717 aaPredicted RBP17.67■□□□□ 0.42
PTPN7-212ENST00000480836 TPTE2Q6XPS3 522 aa17.67■□□□□ 0.42
PTPN7-212ENST00000480836 ABCC12Q96J65 1359 aa17.66■□□□□ 0.42
PTPN7-212ENST00000480836 ARFGEF2Q9Y6D5 1785 aa17.66■□□□□ 0.42
PTPN7-212ENST00000480836 NPR1P16066 1061 aa17.66■□□□□ 0.42
PTPN7-212ENST00000480836 DPY19L2Q6NUT2 758 aa17.66■□□□□ 0.42
PTPN7-212ENST00000480836 LRP10Q7Z4F1 713 aa17.66■□□□□ 0.42
PTPN7-212ENST00000480836 MYL6BP14649 208 aa17.65■□□□□ 0.42
PTPN7-212ENST00000480836 C3orf67Q6ZVT6 689 aa17.65■□□□□ 0.42
PTPN7-212ENST00000480836 ZNF277Q9NRM2 450 aaPredicted RBP17.65■□□□□ 0.42
PTPN7-212ENST00000480836 ZNF652Q9Y2D9 606 aa17.65■□□□□ 0.42
PTPN7-212ENST00000480836 UBN2Q6ZU65 1347 aa17.65■□□□□ 0.42
PTPN7-212ENST00000480836 SNED1Q8TER0 1413 aa17.64■□□□□ 0.42
PTPN7-212ENST00000480836 PDIA6Q15084 440 aa17.64■□□□□ 0.41
PTPN7-212ENST00000480836 SUSD4Q5VX71 490 aa17.64■□□□□ 0.41
PTPN7-212ENST00000480836 ZNF541Q9H0D2 1346 aa17.64■□□□□ 0.41
PTPN7-212ENST00000480836 RGL2O15211 777 aa17.63■□□□□ 0.41
PTPN7-212ENST00000480836 ANXA1P04083 346 aa17.63■□□□□ 0.41
PTPN7-212ENST00000480836 GPTP24298 496 aa17.63■□□□□ 0.41
PTPN7-212ENST00000480836 PROSER3Q2NL68 480 aa17.63■□□□□ 0.41
PTPN7-212ENST00000480836 ZBTB3Q9H5J0 574 aa17.63■□□□□ 0.41
PTPN7-212ENST00000480836 MAP3K15Q6ZN16 1313 aa17.63■□□□□ 0.41
PTPN7-212ENST00000480836 LAMB4A4D0S4 1761 aa17.63■□□□□ 0.41
PTPN7-212ENST00000480836 NUP98P52948 1817 aa17.63■□□□□ 0.41
PTPN7-212ENST00000480836 COL4A5P29400 1685 aa17.62■□□□□ 0.41
PTPN7-212ENST00000480836 ERVV-1B6SEH8 477 aa17.62■□□□□ 0.41
PTPN7-212ENST00000480836 CRY2Q49AN0 593 aa17.62■□□□□ 0.41
PTPN7-212ENST00000480836 CCDC93Q567U6 631 aa17.62■□□□□ 0.41
PTPN7-212ENST00000480836 ZNF34Q8IZ26 560 aa17.62■□□□□ 0.41
PTPN7-212ENST00000480836 FKBP4Q02790 459 aaKnown RBP eCLIP17.61■□□□□ 0.41
PTPN7-212ENST00000480836 SYNE4Q8N205 404 aa17.61■□□□□ 0.41
PTPN7-212ENST00000480836 PNISRQ8TF01 805 aaKnown RBP17.61■□□□□ 0.41
PTPN7-212ENST00000480836 KRT24Q2M2I5 525 aa17.6■□□□□ 0.41
PTPN7-212ENST00000480836 CHADLQ6NUI6 762 aa17.6■□□□□ 0.41
PTPN7-212ENST00000480836 TAF1DQ9H5J8 278 aaPredicted RBP17.6■□□□□ 0.41
PTPN7-212ENST00000480836 RIPK4P57078 832 aa17.59■□□□□ 0.41
PTPN7-212ENST00000480836 SOGA3Q5TF21 947 aa17.59■□□□□ 0.41
PTPN7-212ENST00000480836 L3MBTL3Q96JM7 780 aaPredicted RBP17.59■□□□□ 0.41
PTPN7-212ENST00000480836 FZD9O00144 591 aa17.58■□□□□ 0.4
PTPN7-212ENST00000480836 NTSR2O95665 410 aa17.58■□□□□ 0.4
PTPN7-212ENST00000480836 ITGBL1O95965 494 aaPredicted RBP17.58■□□□□ 0.4
PTPN7-212ENST00000480836 EIF2S2P20042 333 aaKnown RBP17.58■□□□□ 0.4
PTPN7-212ENST00000480836 GTF2E1P29083 439 aaPredicted RBP17.58■□□□□ 0.4
PTPN7-212ENST00000480836 PASKQ96RG2 1323 aa17.57■□□□□ 0.4
PTPN7-212ENST00000480836 TCERG1O14776 1098 aaKnown RBP17.57■□□□□ 0.4
PTPN7-212ENST00000480836 ALDH1B1P30837 517 aa17.57■□□□□ 0.4
PTPN7-212ENST00000480836 HOXA10P31260 410 aaPredicted RBP17.57■□□□□ 0.4
PTPN7-212ENST00000480836 IARSP41252 1262 aaKnown RBP17.57■□□□□ 0.4
PTPN7-212ENST00000480836 TMPOP42166 694 aaKnown RBP17.57■□□□□ 0.4
PTPN7-212ENST00000480836 GIGYF2Q6Y7W6 1299 aaKnown RBP17.57■□□□□ 0.4
PTPN7-212ENST00000480836 ZNF428Q96B54 188 aa17.57■□□□□ 0.4
PTPN7-212ENST00000480836 TSPYL4Q9UJ04 414 aa17.57■□□□□ 0.4
PTPN7-212ENST00000480836 DDX10Q13206 875 aaKnown RBP17.56■□□□□ 0.4
PTPN7-212ENST00000480836 CCDC146Q8IYE0 955 aa17.56■□□□□ 0.4
PTPN7-212ENST00000480836 RTKN2Q8IZC4 609 aa17.56■□□□□ 0.4
PTPN7-212ENST00000480836 NECTIN2Q92692 538 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms