RNA–Protein interactions for RNA: ENST00000473711.1

SP140-208, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 644 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-208ENST00000473711 VSIG10Q8N0Z9 540 aa13.58□□□□□ -0.24
SP140-208ENST00000473711 SLC4A9Q96Q91 983 aa13.58□□□□□ -0.24
SP140-208ENST00000473711 DOT1LQ8TEK3 1739 aa13.58□□□□□ -0.24
SP140-208ENST00000473711 C5P01031 1676 aa13.57□□□□□ -0.24
SP140-208ENST00000473711 PI4KAP2A4QPH2 592 aa13.57□□□□□ -0.24
SP140-208ENST00000473711 NBPF26B4DH59 902 aa13.57□□□□□ -0.24
SP140-208ENST00000473711 CCT4P50991 539 aaKnown RBP13.57□□□□□ -0.24
SP140-208ENST00000473711 NBPF14Q5TI25 921 aa13.57□□□□□ -0.24
SP140-208ENST00000473711 NBPF10Q6P3W6 841 aaKnown RBP13.57□□□□□ -0.24
SP140-208ENST00000473711 COPS6Q7L5N1 327 aa13.57□□□□□ -0.24
SP140-208ENST00000473711 PTF1AQ7RTS3 328 aa13.57□□□□□ -0.24
SP140-208ENST00000473711 NBPF15Q8N660 670 aa13.57□□□□□ -0.24
SP140-208ENST00000473711 PI4KAP1Q8N8J0 262 aa13.57□□□□□ -0.24
SP140-208ENST00000473711 XAGE3Q8WTP9 111 aa13.57□□□□□ -0.24
SP140-208ENST00000473711 SMARCC1Q92922 1105 aaPredicted RBP13.57□□□□□ -0.24
SP140-208ENST00000473711 CHMP4BQ9H444 224 aaKnown RBP13.57□□□□□ -0.24
SP140-208ENST00000473711 ZBTB40Q9NUA8 1239 aa13.57□□□□□ -0.24
SP140-208ENST00000473711 PCDHB15Q9Y5E8 787 aa13.57□□□□□ -0.24
SP140-208ENST00000473711 STARD3NLO95772 234 aa13.56□□□□□ -0.24
SP140-208ENST00000473711 KSR2Q6VAB6 950 aa13.56□□□□□ -0.24
SP140-208ENST00000473711 DNAAF4Q8WXU2 420 aa13.56□□□□□ -0.24
SP140-208ENST00000473711 MAP3K2Q9Y2U5 619 aa13.56□□□□□ -0.24
SP140-208ENST00000473711 UBR2Q8IWV8 1755 aa13.55□□□□□ -0.24
SP140-208ENST00000473711 DDX58O95786 925 aaKnown RBP13.55□□□□□ -0.24
SP140-208ENST00000473711 RXRBP28702 533 aa13.55□□□□□ -0.24
SP140-208ENST00000473711 ATP6V1AP38606 617 aa13.55□□□□□ -0.24
SP140-208ENST00000473711 KRT27Q7Z3Y8 459 aa13.55□□□□□ -0.24
SP140-208ENST00000473711 LRP10Q7Z4F1 713 aa13.55□□□□□ -0.24
SP140-208ENST00000473711 UPF1Q92900 1129 aaKnown RBP eCLIP13.55□□□□□ -0.24
SP140-208ENST00000473711 ERBB4Q15303 1308 aa13.55□□□□□ -0.24
SP140-208ENST00000473711 CACNA1FO60840 1977 aa13.54□□□□□ -0.24
SP140-208ENST00000473711 LOC102724428A0A0B4J2F2 783 aa13.54□□□□□ -0.24
SP140-208ENST00000473711 IGHDP01880 384 aa13.54□□□□□ -0.24
SP140-208ENST00000473711 CYP19A1P11511 503 aaPredicted RBP13.54□□□□□ -0.24
SP140-208ENST00000473711 SIK1P57059 783 aa13.54□□□□□ -0.24
SP140-208ENST00000473711 RIC3Q7Z5B4 369 aa13.54□□□□□ -0.24
SP140-208ENST00000473711 C1orf115Q9H7X2 142 aa13.54□□□□□ -0.24
SP140-208ENST00000473711 ADCY9O60503 1353 aa13.54□□□□□ -0.24
SP140-208ENST00000473711 PALLDQ8WX93 1383 aa13.54□□□□□ -0.24
SP140-208ENST00000473711 BEND3Q5T5X7 828 aa13.53□□□□□ -0.24
SP140-208ENST00000473711 ANKRD13DQ6ZTN6 518 aa13.53□□□□□ -0.24
SP140-208ENST00000473711 MEIS3Q99687 375 aa13.53□□□□□ -0.24
SP140-208ENST00000473711 SRCIN1Q9C0H9 1055 aa13.53□□□□□ -0.24
SP140-208ENST00000473711 ITPK1Q13572 414 aa13.52□□□□□ -0.25
SP140-208ENST00000473711 FAM196AQ6ZSG2 479 aa13.52□□□□□ -0.25
SP140-208ENST00000473711 TTLL7Q6ZT98 887 aa13.52□□□□□ -0.25
SP140-208ENST00000473711 RASEFQ8IZ41 740 aa13.52□□□□□ -0.25
SP140-208ENST00000473711 ZNF330Q9Y3S2 320 aaPredicted RBP13.52□□□□□ -0.25
SP140-208ENST00000473711 KDM2BQ8NHM5 1336 aa13.51□□□□□ -0.25
SP140-208ENST00000473711 CENPQQ7L2Z9 268 aaPredicted RBP13.51□□□□□ -0.25
SP140-208ENST00000473711 RWDD1Q9H446 243 aaPredicted RBP13.51□□□□□ -0.25
SP140-208ENST00000473711 LAMB4A4D0S4 1761 aa13.5□□□□□ -0.25
SP140-208ENST00000473711 KCNQ4P56696 695 aa13.5□□□□□ -0.25
SP140-208ENST00000473711 PLBD2Q8NHP8 589 aa13.5□□□□□ -0.25
SP140-208ENST00000473711 ARXQ96QS3 562 aa13.5□□□□□ -0.25
SP140-208ENST00000473711 MYD88Q99836 296 aa13.5□□□□□ -0.25
SP140-208ENST00000473711 METTL22Q9BUU2 404 aaPredicted RBP13.5□□□□□ -0.25
SP140-208ENST00000473711 BCL11BQ9C0K0 894 aaPredicted RBP13.5□□□□□ -0.25
SP140-208ENST00000473711 USP44Q9H0E7 712 aa13.5□□□□□ -0.25
SP140-208ENST00000473711 ALDH1L1O75891 902 aa13.49□□□□□ -0.25
SP140-208ENST00000473711 GNAI3P08754 354 aa13.49□□□□□ -0.25
SP140-208ENST00000473711 NEXNQ0ZGT2 675 aa13.49□□□□□ -0.25
SP140-208ENST00000473711 INTS5Q6P9B9 1019 aaKnown RBP13.49□□□□□ -0.25
SP140-208ENST00000473711 ZBTB1Q9Y2K1 713 aa13.49□□□□□ -0.25
SP140-208ENST00000473711 PXDNLA1KZ92 1463 aa13.48□□□□□ -0.25
SP140-208ENST00000473711 TRIM37O94972 964 aa13.48□□□□□ -0.25
SP140-208ENST00000473711 CRKLP46109 303 aaKnown RBP13.48□□□□□ -0.25
SP140-208ENST00000473711 CWF19L2Q2TBE0 894 aaKnown RBP13.48□□□□□ -0.25
SP140-208ENST00000473711 LINS1Q8NG48 757 aa13.48□□□□□ -0.25
SP140-208ENST00000473711 MS4A3Q96HJ5 214 aa13.48□□□□□ -0.25
SP140-208ENST00000473711 ZBTB3Q9H5J0 574 aa13.48□□□□□ -0.25
SP140-208ENST00000473711 CCDC87Q9NVE4 849 aa13.48□□□□□ -0.25
SP140-208ENST00000473711 ATP10DQ9P241 1426 aa13.47□□□□□ -0.25
SP140-208ENST00000473711 GNAI2P04899 355 aa13.47□□□□□ -0.25
SP140-208ENST00000473711 IGKV5-2P06315 115 aa13.47□□□□□ -0.25
SP140-208ENST00000473711 UBTFL1P0CB47 393 aaPredicted RBP13.47□□□□□ -0.25
SP140-208ENST00000473711 IL6STP40189 918 aaPredicted RBP13.47□□□□□ -0.25
SP140-208ENST00000473711 HDAC1Q13547 482 aaPredicted RBP13.47□□□□□ -0.25
SP140-208ENST00000473711 KIF6Q6ZMV9 814 aa13.47□□□□□ -0.25
SP140-208ENST00000473711 LINC00116Q8NCU8 138 aa13.47□□□□□ -0.25
SP140-208ENST00000473711 C9orf78Q9NZ63 289 aaPredicted RBP13.47□□□□□ -0.25
SP140-208ENST00000473711 BRWD3Q6RI45 1802 aa13.46□□□□□ -0.25
SP140-208ENST00000473711 NEURL1BA8MQ27 555 aa13.46□□□□□ -0.25
SP140-208ENST00000473711 ATP5J2-PTCD1G3V325 749 aa13.46□□□□□ -0.25
SP140-208ENST00000473711 NBPF7P0C2Y1 421 aaPredicted RBP13.46□□□□□ -0.25
SP140-208ENST00000473711 LHX8Q68G74 356 aa13.46□□□□□ -0.25
SP140-208ENST00000473711 NPM2Q86SE8 214 aaKnown RBP13.46□□□□□ -0.25
SP140-208ENST00000473711 SIRT2Q8IXJ6 389 aa13.46□□□□□ -0.25
SP140-208ENST00000473711 RPAP2Q8IXW5 612 aaPredicted RBP13.46□□□□□ -0.25
SP140-208ENST00000473711 CCNL1Q9UK58 526 aaPredicted RBP13.46□□□□□ -0.25
SP140-208ENST00000473711 LRRFIP2Q9Y608 721 aaKnown RBP13.46□□□□□ -0.25
SP140-208ENST00000473711 TJP1Q07157 1748 aa13.46□□□□□ -0.25
SP140-208ENST00000473711 NHSQ6T4R5 1651 aa13.46□□□□□ -0.26
SP140-208ENST00000473711 NUBP1P53384 320 aa13.45□□□□□ -0.26
SP140-208ENST00000473711 CEP85Q6P2H3 762 aa13.45□□□□□ -0.26
SP140-208ENST00000473711 ANKRD44Q8N8A2 993 aa13.45□□□□□ -0.26
SP140-208ENST00000473711 TBC1D2BQ9UPU7 963 aa13.45□□□□□ -0.26
SP140-208ENST00000473711 BTAF1O14981 1849 aa13.44□□□□□ -0.26
SP140-208ENST00000473711 EIF5P55010 431 aaKnown RBP13.44□□□□□ -0.26
SP140-208ENST00000473711 GCKRQ14397 625 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms