RNA–Protein interactions for RNA: ENST00000473095.1

CHCHD2-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 2, humanhuman

TSL 1 (best)

Gene CHCHD2, Length 694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD2-202ENST00000473095 SOGA3Q5TF21 947 aa18.02■□□□□ 0.48
CHCHD2-202ENST00000473095 PRPF40BQ6NWY9 871 aaKnown RBP18.02■□□□□ 0.48
CHCHD2-202ENST00000473095 SCN4AP35499 1836 aa18.02■□□□□ 0.47
CHCHD2-202ENST00000473095 U2SURPO15042 1029 aaKnown RBP18.01■□□□□ 0.47
CHCHD2-202ENST00000473095 DDNO94850 711 aaPredicted RBP18.01■□□□□ 0.47
CHCHD2-202ENST00000473095 POTEIP0CG38 1075 aa18.01■□□□□ 0.47
CHCHD2-202ENST00000473095 POTEJP0CG39 1038 aa18.01■□□□□ 0.47
CHCHD2-202ENST00000473095 MASTLQ96GX5 879 aa18.01■□□□□ 0.47
CHCHD2-202ENST00000473095 ST5P78524 1137 aa18■□□□□ 0.47
CHCHD2-202ENST00000473095 DZIP3Q86Y13 1208 aaKnown RBP18■□□□□ 0.47
CHCHD2-202ENST00000473095 C7orf43Q8WVR3 580 aa18■□□□□ 0.47
CHCHD2-202ENST00000473095 KCNQ3O43525 872 aa17.99■□□□□ 0.47
CHCHD2-202ENST00000473095 NPM2Q86SE8 214 aaKnown RBP17.99■□□□□ 0.47
CHCHD2-202ENST00000473095 BTBD11A6QL63 1104 aa17.98■□□□□ 0.47
CHCHD2-202ENST00000473095 NPHP1O15259 732 aa17.98■□□□□ 0.47
CHCHD2-202ENST00000473095 CLEC4GQ6UXB4 293 aa17.98■□□□□ 0.47
CHCHD2-202ENST00000473095 L3MBTL3Q96JM7 780 aaPredicted RBP17.98■□□□□ 0.47
CHCHD2-202ENST00000473095 MKRN1Q9UHC7 482 aaKnown RBP17.98■□□□□ 0.47
CHCHD2-202ENST00000473095 USP16Q9Y5T5 823 aa17.98■□□□□ 0.47
CHCHD2-202ENST00000473095 PASKQ96RG2 1323 aa17.98■□□□□ 0.47
CHCHD2-202ENST00000473095 KLRG2A4D1S0 409 aaPredicted RBP17.97■□□□□ 0.47
CHCHD2-202ENST00000473095 PHACTR3Q96KR7 559 aa17.97■□□□□ 0.47
CHCHD2-202ENST00000473095 CNTNAP1P78357 1384 aa17.96■□□□□ 0.47
CHCHD2-202ENST00000473095 IQCA1LA6NCM1 817 aa17.96■□□□□ 0.47
CHCHD2-202ENST00000473095 LDHDQ86WU2 507 aa17.96■□□□□ 0.47
CHCHD2-202ENST00000473095 CCER1Q8TC90 406 aaPredicted RBP17.96■□□□□ 0.47
CHCHD2-202ENST00000473095 RGL2O15211 777 aa17.95■□□□□ 0.46
CHCHD2-202ENST00000473095 NPR1P16066 1061 aa17.95■□□□□ 0.46
CHCHD2-202ENST00000473095 CCDC93Q567U6 631 aa17.95■□□□□ 0.46
CHCHD2-202ENST00000473095 NBPF5PQ86XG9 351 aaPredicted RBP17.95■□□□□ 0.46
CHCHD2-202ENST00000473095 RSPH6AQ9H0K4 717 aa17.95■□□□□ 0.46
CHCHD2-202ENST00000473095 TAF1DQ9H5J8 278 aaPredicted RBP17.95■□□□□ 0.46
CHCHD2-202ENST00000473095 ADAMTSL1Q8N6G6 1762 aa17.94■□□□□ 0.46
CHCHD2-202ENST00000473095 PRAMEF22A3QJZ6 481 aa17.94■□□□□ 0.46
CHCHD2-202ENST00000473095 PRKAR2BP31323 418 aa17.94■□□□□ 0.46
CHCHD2-202ENST00000473095 PIP4K2AP48426 406 aaPredicted RBP17.94■□□□□ 0.46
CHCHD2-202ENST00000473095 ZNF652Q9Y2D9 606 aa17.94■□□□□ 0.46
CHCHD2-202ENST00000473095 ITGBL1O95965 494 aaPredicted RBP17.93■□□□□ 0.46
CHCHD2-202ENST00000473095 SNRPA1P09661 255 aaKnown RBP17.93■□□□□ 0.46
CHCHD2-202ENST00000473095 FKBP4Q02790 459 aaKnown RBP eCLIP17.93■□□□□ 0.46
CHCHD2-202ENST00000473095 FOXN1O15353 648 aa17.92■□□□□ 0.46
CHCHD2-202ENST00000473095 TPTE2Q6XPS3 522 aa17.92■□□□□ 0.46
CHCHD2-202ENST00000473095 ZNF541Q9H0D2 1346 aa17.92■□□□□ 0.46
CHCHD2-202ENST00000473095 NBPF26B4DH59 902 aa17.91■□□□□ 0.46
CHCHD2-202ENST00000473095 NBPF10Q6P3W6 841 aaKnown RBP17.91■□□□□ 0.46
CHCHD2-202ENST00000473095 NBPF15Q8N660 670 aa17.91■□□□□ 0.46
CHCHD2-202ENST00000473095 PRDM10Q9NQV6 1147 aa17.91■□□□□ 0.46
CHCHD2-202ENST00000473095 TMEM88BA6NKF7 163 aa17.9■□□□□ 0.46
CHCHD2-202ENST00000473095 RTKN2Q8IZC4 609 aa17.9■□□□□ 0.46
CHCHD2-202ENST00000473095 ZNF277Q9NRM2 450 aaPredicted RBP17.9■□□□□ 0.46
CHCHD2-202ENST00000473095 HACL1Q9UJ83 578 aa17.9■□□□□ 0.46
CHCHD2-202ENST00000473095 NIP7Q9Y221 180 aaKnown RBP eCLIP17.9■□□□□ 0.46
CHCHD2-202ENST00000473095 VEGFBP49765 207 aa17.89■□□□□ 0.45
CHCHD2-202ENST00000473095 CNGB1Q14028 1251 aaPredicted RBP17.89■□□□□ 0.45
CHCHD2-202ENST00000473095 OLFM4Q6UX06 510 aa17.89■□□□□ 0.45
CHCHD2-202ENST00000473095 CFAP53Q96M91 514 aa17.89■□□□□ 0.45
CHCHD2-202ENST00000473095 SNED1Q8TER0 1413 aa17.89■□□□□ 0.45
CHCHD2-202ENST00000473095 FZD9O00144 591 aa17.88■□□□□ 0.45
CHCHD2-202ENST00000473095 EPHX2P34913 555 aa17.88■□□□□ 0.45
CHCHD2-202ENST00000473095 EAPPQ56P03 285 aaPredicted RBP17.88■□□□□ 0.45
CHCHD2-202ENST00000473095 MCM10Q7L590 875 aa17.88■□□□□ 0.45
CHCHD2-202ENST00000473095 RTF1Q92541 710 aaKnown RBP17.88■□□□□ 0.45
CHCHD2-202ENST00000473095 LAMB4A4D0S4 1761 aa17.88■□□□□ 0.45
CHCHD2-202ENST00000473095 HTATSF1O43719 755 aaKnown RBP17.87■□□□□ 0.45
CHCHD2-202ENST00000473095 ALDH1B1P30837 517 aa17.87■□□□□ 0.45
CHCHD2-202ENST00000473095 IARSP41252 1262 aaKnown RBP17.87■□□□□ 0.45
CHCHD2-202ENST00000473095 CTCFP49711 727 aaPredicted RBP17.87■□□□□ 0.45
CHCHD2-202ENST00000473095 NUDCQ9Y266 331 aa17.87■□□□□ 0.45
CHCHD2-202ENST00000473095 NUP98P52948 1817 aa17.86■□□□□ 0.45
CHCHD2-202ENST00000473095 HLFQ16534 295 aa17.86■□□□□ 0.45
CHCHD2-202ENST00000473095 PNMA8AQ86V59 439 aaPredicted RBP17.86■□□□□ 0.45
CHCHD2-202ENST00000473095 SYNE4Q8N205 404 aa17.86■□□□□ 0.45
CHCHD2-202ENST00000473095 WBP1LQ9NX94 342 aa17.86■□□□□ 0.45
CHCHD2-202ENST00000473095 RASSF10A6NK89 507 aa17.85■□□□□ 0.45
CHCHD2-202ENST00000473095 CRY2Q49AN0 593 aa17.85■□□□□ 0.45
CHCHD2-202ENST00000473095 GPC2Q8N158 579 aa17.85■□□□□ 0.45
CHCHD2-202ENST00000473095 AIDAQ96BJ3 306 aa17.85■□□□□ 0.45
CHCHD2-202ENST00000473095 PSMD1Q99460 953 aa17.85■□□□□ 0.45
CHCHD2-202ENST00000473095 CLEC11AQ9Y240 323 aa17.85■□□□□ 0.45
CHCHD2-202ENST00000473095 RNF123Q5XPI4 1314 aa17.84■□□□□ 0.45
CHCHD2-202ENST00000473095 FAM177BA6PVY3 158 aa17.84■□□□□ 0.45
CHCHD2-202ENST00000473095 U2AF1L5P0DN76 240 aaPredicted RBP17.84■□□□□ 0.45
CHCHD2-202ENST00000473095 U2AF1Q01081 240 aaKnown RBP eCLIP17.84■□□□□ 0.45
CHCHD2-202ENST00000473095 DCTN1Q14203 1278 aa17.84■□□□□ 0.45
CHCHD2-202ENST00000473095 CNTROBQ8N137 903 aa17.84■□□□□ 0.45
CHCHD2-202ENST00000473095 TAF7Q15545 349 aaPredicted RBP17.83■□□□□ 0.44
CHCHD2-202ENST00000473095 KDM3BQ7LBC6 1761 aa17.83■□□□□ 0.44
CHCHD2-202ENST00000473095 COL4A5P29400 1685 aa17.83■□□□□ 0.44
CHCHD2-202ENST00000473095 RIC1Q4ADV7 1423 aa17.82■□□□□ 0.44
CHCHD2-202ENST00000473095 ABCC12Q96J65 1359 aa17.82■□□□□ 0.44
CHCHD2-202ENST00000473095 LTBP1Q14766 1721 aa17.82■□□□□ 0.44
CHCHD2-202ENST00000473095 GTF2E1P29083 439 aaPredicted RBP17.82■□□□□ 0.44
CHCHD2-202ENST00000473095 DEFB115Q30KQ5 88 aa17.82■□□□□ 0.44
CHCHD2-202ENST00000473095 MAP1SQ66K74 1059 aaPredicted RBP17.82■□□□□ 0.44
CHCHD2-202ENST00000473095 CC2D2BQ6DHV5 1058 aa17.82■□□□□ 0.44
CHCHD2-202ENST00000473095 NYXQ9GZU5 481 aa17.82■□□□□ 0.44
CHCHD2-202ENST00000473095 DLG5Q8TDM6 1919 aa17.82■□□□□ 0.44
CHCHD2-202ENST00000473095 ERVV-1B6SEH8 477 aa17.81■□□□□ 0.44
CHCHD2-202ENST00000473095 PPP2R1AP30153 589 aa17.81■□□□□ 0.44
CHCHD2-202ENST00000473095 JDP2Q8WYK2 163 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms