RNA–Protein interactions for RNA: ENST00000472476.5

TARDBP-204, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 1,001 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-204ENST00000472476 STYK1Q6J9G0 422 aa19.32■□□□□ 0.68
TARDBP-204ENST00000472476 DPY19L2Q6NUT2 758 aa19.32■□□□□ 0.68
TARDBP-204ENST00000472476 SETDB2Q96T68 719 aa19.32■□□□□ 0.68
TARDBP-204ENST00000472476 BTBD11A6QL63 1104 aa19.31■□□□□ 0.68
TARDBP-204ENST00000472476 DDNO94850 711 aaPredicted RBP19.31■□□□□ 0.68
TARDBP-204ENST00000472476 PRPF40BQ6NWY9 871 aaKnown RBP19.31■□□□□ 0.68
TARDBP-204ENST00000472476 HSPA1AP0DMV8 641 aaKnown RBP19.3■□□□□ 0.68
TARDBP-204ENST00000472476 HSPA1BP0DMV9 641 aaKnown RBP19.3■□□□□ 0.68
TARDBP-204ENST00000472476 PRKAR2BP31323 418 aa19.3■□□□□ 0.68
TARDBP-204ENST00000472476 DZIP3Q86Y13 1208 aaKnown RBP19.3■□□□□ 0.68
TARDBP-204ENST00000472476 CNBD1Q8NA66 436 aa19.3■□□□□ 0.68
TARDBP-204ENST00000472476 CNKSR1Q969H4 720 aa19.3■□□□□ 0.68
TARDBP-204ENST00000472476 TAOK3Q9H2K8 898 aa19.3■□□□□ 0.68
TARDBP-204ENST00000472476 KLRG2A4D1S0 409 aaPredicted RBP19.29■□□□□ 0.68
TARDBP-204ENST00000472476 NBPF26B4DH59 902 aa19.29■□□□□ 0.68
TARDBP-204ENST00000472476 NBPF10Q6P3W6 841 aaKnown RBP19.29■□□□□ 0.68
TARDBP-204ENST00000472476 TNS4Q8IZW8 715 aa19.29■□□□□ 0.68
TARDBP-204ENST00000472476 NBPF15Q8N660 670 aa19.29■□□□□ 0.68
TARDBP-204ENST00000472476 MASTLQ96GX5 879 aa19.29■□□□□ 0.68
TARDBP-204ENST00000472476 CHADLQ6NUI6 762 aa19.28■□□□□ 0.68
TARDBP-204ENST00000472476 CLEC4GQ6UXB4 293 aa19.27■□□□□ 0.68
TARDBP-204ENST00000472476 ST5P78524 1137 aa19.26■□□□□ 0.67
TARDBP-204ENST00000472476 OLFM4Q6UX06 510 aa19.26■□□□□ 0.67
TARDBP-204ENST00000472476 MCM10Q7L590 875 aa19.26■□□□□ 0.67
TARDBP-204ENST00000472476 SCN4AP35499 1836 aa19.25■□□□□ 0.67
TARDBP-204ENST00000472476 CAPN15O75808 1086 aa19.25■□□□□ 0.67
TARDBP-204ENST00000472476 CREBZFQ9NS37 354 aa19.25■□□□□ 0.67
TARDBP-204ENST00000472476 PASKQ96RG2 1323 aa19.25■□□□□ 0.67
TARDBP-204ENST00000472476 SNRPA1P09661 255 aaKnown RBP19.24■□□□□ 0.67
TARDBP-204ENST00000472476 DCTN1Q14203 1278 aa19.24■□□□□ 0.67
TARDBP-204ENST00000472476 NBPF5PQ86XG9 351 aaPredicted RBP19.24■□□□□ 0.67
TARDBP-204ENST00000472476 L3MBTL3Q96JM7 780 aaPredicted RBP19.24■□□□□ 0.67
TARDBP-204ENST00000472476 MKRN1Q9UHC7 482 aaKnown RBP19.23■□□□□ 0.67
TARDBP-204ENST00000472476 ADAMTSL1Q8N6G6 1762 aa19.22■□□□□ 0.67
TARDBP-204ENST00000472476 ITGBL1O95965 494 aaPredicted RBP19.22■□□□□ 0.67
TARDBP-204ENST00000472476 NPR1P16066 1061 aa19.22■□□□□ 0.67
TARDBP-204ENST00000472476 HLFQ16534 295 aa19.22■□□□□ 0.67
TARDBP-204ENST00000472476 SOGA3Q5TF21 947 aa19.22■□□□□ 0.67
TARDBP-204ENST00000472476 TAF1DQ9H5J8 278 aaPredicted RBP19.22■□□□□ 0.67
TARDBP-204ENST00000472476 ZNF541Q9H0D2 1346 aa19.22■□□□□ 0.67
TARDBP-204ENST00000472476 NPM2Q86SE8 214 aaKnown RBP19.21■□□□□ 0.67
TARDBP-204ENST00000472476 SNED1Q8TER0 1413 aa19.21■□□□□ 0.67
TARDBP-204ENST00000472476 RGL2O15211 777 aa19.2■□□□□ 0.66
TARDBP-204ENST00000472476 NPHP1O15259 732 aa19.2■□□□□ 0.66
TARDBP-204ENST00000472476 PPP2R1AP30153 589 aa19.2■□□□□ 0.66
TARDBP-204ENST00000472476 FKBP4Q02790 459 aaKnown RBP eCLIP19.2■□□□□ 0.66
TARDBP-204ENST00000472476 CCDC93Q567U6 631 aa19.2■□□□□ 0.66
TARDBP-204ENST00000472476 ZNF277Q9NRM2 450 aaPredicted RBP19.2■□□□□ 0.66
TARDBP-204ENST00000472476 NIP7Q9Y221 180 aaKnown RBP eCLIP19.2■□□□□ 0.66
TARDBP-204ENST00000472476 NUP98P52948 1817 aa19.19■□□□□ 0.66
TARDBP-204ENST00000472476 U2AF1L5P0DN76 240 aaPredicted RBP19.19■□□□□ 0.66
TARDBP-204ENST00000472476 U2AF1Q01081 240 aaKnown RBP eCLIP19.19■□□□□ 0.663e-7■■■□□ 15.3
TARDBP-204ENST00000472476 TPTE2Q6XPS3 522 aa19.19■□□□□ 0.66
TARDBP-204ENST00000472476 LDHDQ86WU2 507 aa19.19■□□□□ 0.66
TARDBP-204ENST00000472476 CFAP53Q96M91 514 aa19.19■□□□□ 0.66
TARDBP-204ENST00000472476 MIS18AQ9NYP9 233 aa19.19■□□□□ 0.66
TARDBP-204ENST00000472476 DLG5Q8TDM6 1919 aa19.19■□□□□ 0.66
TARDBP-204ENST00000472476 CNTNAP1P78357 1384 aa19.19■□□□□ 0.66
TARDBP-204ENST00000472476 HTATSF1O43719 755 aaKnown RBP19.18■□□□□ 0.66
TARDBP-204ENST00000472476 IQCA1LA6NCM1 817 aa19.17■□□□□ 0.66
TARDBP-204ENST00000472476 FAM177BA6PVY3 158 aa19.17■□□□□ 0.66
TARDBP-204ENST00000472476 FZD9O00144 591 aa19.17■□□□□ 0.66
TARDBP-204ENST00000472476 NUDCQ9Y266 331 aa19.17■□□□□ 0.66
TARDBP-204ENST00000472476 ZNF652Q9Y2D9 606 aa19.17■□□□□ 0.66
TARDBP-204ENST00000472476 COL4A5P29400 1685 aa19.17■□□□□ 0.66
TARDBP-204ENST00000472476 LAMB4A4D0S4 1761 aa19.16■□□□□ 0.66
TARDBP-204ENST00000472476 FOXN1O15353 648 aa19.16■□□□□ 0.66
TARDBP-204ENST00000472476 TAF7Q15545 349 aaPredicted RBP19.16■□□□□ 0.66
TARDBP-204ENST00000472476 RTF1Q92541 710 aaKnown RBP19.16■□□□□ 0.66
TARDBP-204ENST00000472476 KDM3BQ7LBC6 1761 aa19.16■□□□□ 0.66
TARDBP-204ENST00000472476 CRY2Q49AN0 593 aa19.15■□□□□ 0.66
TARDBP-204ENST00000472476 SLC51AQ86UW1 340 aa19.15■□□□□ 0.66
TARDBP-204ENST00000472476 RTKN2Q8IZC4 609 aa19.15■□□□□ 0.66
TARDBP-204ENST00000472476 SYNE4Q8N205 404 aa19.15■□□□□ 0.66
TARDBP-204ENST00000472476 ABCC12Q96J65 1359 aa19.15■□□□□ 0.66
TARDBP-204ENST00000472476 VEGFBP49765 207 aa19.14■□□□□ 0.65
TARDBP-204ENST00000472476 LTBP1Q14766 1721 aa19.14■□□□□ 0.65
TARDBP-204ENST00000472476 ALDH1B1P30837 517 aa19.13■□□□□ 0.65
TARDBP-204ENST00000472476 IARSP41252 1262 aaKnown RBP19.13■□□□□ 0.65
TARDBP-204ENST00000472476 HACL1Q9UJ83 578 aa19.13■□□□□ 0.65
TARDBP-204ENST00000472476 TMEM88BA6NKF7 163 aa19.12■□□□□ 0.65
TARDBP-204ENST00000472476 EPHX2P34913 555 aa19.12■□□□□ 0.65
TARDBP-204ENST00000472476 EAPPQ56P03 285 aaPredicted RBP19.12■□□□□ 0.65
TARDBP-204ENST00000472476 TTLL7Q6ZT98 887 aa19.12■□□□□ 0.65
TARDBP-204ENST00000472476 NUTM1Q86Y26 1132 aa19.12■□□□□ 0.65
TARDBP-204ENST00000472476 PSMD1Q99460 953 aa19.12■□□□□ 0.65
TARDBP-204ENST00000472476 RNF123Q5XPI4 1314 aa19.11■□□□□ 0.65
TARDBP-204ENST00000472476 ERVV-1B6SEH8 477 aa19.11■□□□□ 0.65
TARDBP-204ENST00000472476 UBN2Q6ZU65 1347 aa19.1■□□□□ 0.65
TARDBP-204ENST00000472476 HOXA10P31260 410 aaPredicted RBP19.1■□□□□ 0.65
TARDBP-204ENST00000472476 EIF4A1P60842 406 aaKnown RBP19.1■□□□□ 0.65
TARDBP-204ENST00000472476 MAP1SQ66K74 1059 aaPredicted RBP19.1■□□□□ 0.65
TARDBP-204ENST00000472476 NGEFQ8N5V2 710 aa19.1■□□□□ 0.65
TARDBP-204ENST00000472476 PLEKHF1Q96S99 279 aa19.1■□□□□ 0.65
TARDBP-204ENST00000472476 MAP3K15Q6ZN16 1313 aa19.09■□□□□ 0.65
TARDBP-204ENST00000472476 CNTROBQ8N137 903 aa19.09■□□□□ 0.65
TARDBP-204ENST00000472476 GPC2Q8N158 579 aa19.09■□□□□ 0.65
TARDBP-204ENST00000472476 PRDM10Q9NQV6 1147 aa19.09■□□□□ 0.65
TARDBP-204ENST00000472476 WBP1LQ9NX94 342 aa19.09■□□□□ 0.65
TARDBP-204ENST00000472476 SUSD4Q5VX71 490 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms