RNA–Protein interactions for RNA: ENST00000472420.5

LRPPRC-208, Transcript of leucine rich pentatricopeptide repeat containing, humanhuman

TSL 2

Gene LRPPRC, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRPPRC-208ENST00000472420 TMOD3Q9NYL9 352 aa10.48□□□□□ -0.73
LRPPRC-208ENST00000472420 CENPJQ9HC77 1338 aaPredicted RBP10.48□□□□□ -0.73
LRPPRC-208ENST00000472420 UNC80Q8N2C7 3258 aa10.48□□□□□ -0.73
LRPPRC-208ENST00000472420 FBXO46Q6PJ61 603 aaPredicted RBP10.47□□□□□ -0.73
LRPPRC-208ENST00000472420 NME9Q86XW9 330 aa10.47□□□□□ -0.73
LRPPRC-208ENST00000472420 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.47□□□□□ -0.73
LRPPRC-208ENST00000472420 DCAF11Q8TEB1 546 aa10.47□□□□□ -0.73
LRPPRC-208ENST00000472420 STAC3Q96MF2 364 aa10.47□□□□□ -0.73
LRPPRC-208ENST00000472420 PAPPA2Q9BXP8 1791 aa10.47□□□□□ -0.73
LRPPRC-208ENST00000472420 NKX1-1Q15270 411 aaPredicted RBP10.46□□□□□ -0.73
LRPPRC-208ENST00000472420 NBPF6Q5VWK0 638 aa10.46□□□□□ -0.73
LRPPRC-208ENST00000472420 GPC2Q8N158 579 aa10.46□□□□□ -0.73
LRPPRC-208ENST00000472420 ZNF622Q969S3 477 aaKnown RBP eCLIP10.46□□□□□ -0.73
LRPPRC-208ENST00000472420 NBPF4Q96M43 638 aa10.46□□□□□ -0.73
LRPPRC-208ENST00000472420 SLC4A9Q96Q91 983 aa10.46□□□□□ -0.73
LRPPRC-208ENST00000472420 ATG3Q9NT62 314 aa10.46□□□□□ -0.73
LRPPRC-208ENST00000472420 HDAC9Q9UKV0 1011 aa10.46□□□□□ -0.73
LRPPRC-208ENST00000472420 CACNA1SQ13698 1873 aa10.46□□□□□ -0.74
LRPPRC-208ENST00000472420 COL11A2P13942 1736 aaPredicted RBP10.45□□□□□ -0.74
LRPPRC-208ENST00000472420 CARMIL3Q8ND23 1372 aa10.45□□□□□ -0.74
LRPPRC-208ENST00000472420 POTEFA5A3E0 1075 aa10.45□□□□□ -0.74
LRPPRC-208ENST00000472420 COL9A1P20849 921 aa10.45□□□□□ -0.74
LRPPRC-208ENST00000472420 SOGA3Q5TF21 947 aa10.45□□□□□ -0.74
LRPPRC-208ENST00000472420 USHBP1Q8N6Y0 703 aa10.45□□□□□ -0.74
LRPPRC-208ENST00000472420 ANKRD31Q8N7Z5 1873 aa10.44□□□□□ -0.74
LRPPRC-208ENST00000472420 SLX4Q8IY92 1834 aa10.44□□□□□ -0.74
LRPPRC-208ENST00000472420 ARFGEF2Q9Y6D5 1785 aa10.44□□□□□ -0.74
LRPPRC-208ENST00000472420 TTC28Q96AY4 2481 aa10.44□□□□□ -0.74
LRPPRC-208ENST00000472420 LMOD1P29536 600 aaPredicted RBP10.44□□□□□ -0.74
LRPPRC-208ENST00000472420 HOXC9P31274 260 aa10.44□□□□□ -0.74
LRPPRC-208ENST00000472420 PDZRN3Q9UPQ7 1066 aa10.44□□□□□ -0.74
LRPPRC-208ENST00000472420 H0YGN5 161 aa10.43□□□□□ -0.74
LRPPRC-208ENST00000472420 SERPINB2P05120 415 aa10.43□□□□□ -0.74
LRPPRC-208ENST00000472420 PLA2G5P39877 138 aa10.43□□□□□ -0.74
LRPPRC-208ENST00000472420 KIF23Q02241 960 aaPredicted RBP10.43□□□□□ -0.74
LRPPRC-208ENST00000472420 NFIXQ14938 502 aa10.43□□□□□ -0.74
LRPPRC-208ENST00000472420 USP50Q70EL3 339 aaPredicted RBP10.43□□□□□ -0.74
LRPPRC-208ENST00000472420 SYNE4Q8N205 404 aa10.43□□□□□ -0.74
LRPPRC-208ENST00000472420 RBM27Q9P2N5 1060 aaKnown RBP10.43□□□□□ -0.74
LRPPRC-208ENST00000472420 BCORQ6W2J9 1755 aa10.43□□□□□ -0.74
LRPPRC-208ENST00000472420 BRCA2P51587 3418 aa10.42□□□□□ -0.74
LRPPRC-208ENST00000472420 FAM155AB1AL88 458 aaPredicted RBP10.42□□□□□ -0.74
LRPPRC-208ENST00000472420 FZD9O00144 591 aa10.42□□□□□ -0.74
LRPPRC-208ENST00000472420 INTS3Q68E01 1043 aaKnown RBP10.42□□□□□ -0.74
LRPPRC-208ENST00000472420 EVC2Q86UK5 1308 aa10.41□□□□□ -0.74
LRPPRC-208ENST00000472420 HAX1O00165 279 aa10.41□□□□□ -0.74
LRPPRC-208ENST00000472420 ZPR1O75312 459 aa10.41□□□□□ -0.74
LRPPRC-208ENST00000472420 HUNKP57058 714 aa10.41□□□□□ -0.74
LRPPRC-208ENST00000472420 USPL1Q5W0Q7 1092 aa10.41□□□□□ -0.74
LRPPRC-208ENST00000472420 ZNF408Q9H9D4 720 aa10.41□□□□□ -0.74
LRPPRC-208ENST00000472420 SBNO2Q9Y2G9 1366 aa10.4□□□□□ -0.74
LRPPRC-208ENST00000472420 SPTBN5Q9NRC6 3674 aaKnown RBP10.4□□□□□ -0.74
LRPPRC-208ENST00000472420 EPS15P42566 896 aa10.4□□□□□ -0.74
LRPPRC-208ENST00000472420 CRKLP46109 303 aaKnown RBP10.4□□□□□ -0.74
LRPPRC-208ENST00000472420 AMPHP49418 695 aa10.4□□□□□ -0.74
LRPPRC-208ENST00000472420 RGMBQ6NW40 437 aa10.4□□□□□ -0.74
LRPPRC-208ENST00000472420 ZNF296Q8WUU4 475 aaPredicted RBP10.4□□□□□ -0.74
LRPPRC-208ENST00000472420 CNKSR1Q969H4 720 aa10.4□□□□□ -0.74
LRPPRC-208ENST00000472420 CCDC102AQ96A19 550 aa10.4□□□□□ -0.74
LRPPRC-208ENST00000472420 LOC105371045A0A1W2PR82 267 aa10.39□□□□□ -0.75
LRPPRC-208ENST00000472420 PDE6BP35913 854 aa10.39□□□□□ -0.75
LRPPRC-208ENST00000472420 FKBP4Q02790 459 aaKnown RBP eCLIP10.39□□□□□ -0.75
LRPPRC-208ENST00000472420 PRPF40BQ6NWY9 871 aaKnown RBP10.39□□□□□ -0.75
LRPPRC-208ENST00000472420 IFNLR1Q8IU57 520 aaPredicted RBP10.39□□□□□ -0.75
LRPPRC-208ENST00000472420 SPOCK2Q92563 424 aa10.39□□□□□ -0.75
LRPPRC-208ENST00000472420 FAM122AQ96E09 287 aa10.39□□□□□ -0.75
LRPPRC-208ENST00000472420 ZNF277Q9NRM2 450 aaPredicted RBP10.39□□□□□ -0.75
LRPPRC-208ENST00000472420 LAMB4A4D0S4 1761 aa10.39□□□□□ -0.75
LRPPRC-208ENST00000472420 VCANP13611 3396 aa10.38□□□□□ -0.75
LRPPRC-208ENST00000472420 SCNN1DP51172 638 aa10.38□□□□□ -0.75
LRPPRC-208ENST00000472420 CCDC93Q567U6 631 aa10.38□□□□□ -0.75
LRPPRC-208ENST00000472420 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.38□□□□□ -0.75
LRPPRC-208ENST00000472420 CSRNP1Q96S65 589 aa10.38□□□□□ -0.75
LRPPRC-208ENST00000472420 BRIP1Q9BX63 1249 aa10.38□□□□□ -0.75
LRPPRC-208ENST00000472420 GLIS2Q9BZE0 524 aaPredicted RBP10.38□□□□□ -0.75
LRPPRC-208ENST00000472420 GJA3Q9Y6H8 435 aa10.38□□□□□ -0.75
LRPPRC-208ENST00000472420 RTL1A6NKG5 1358 aa10.38□□□□□ -0.75
LRPPRC-208ENST00000472420 ERBB4Q15303 1308 aa10.37□□□□□ -0.75
LRPPRC-208ENST00000472420 C19orf67A6NJJ6 358 aa10.37□□□□□ -0.75
LRPPRC-208ENST00000472420 EN2P19622 333 aaPredicted RBP10.37□□□□□ -0.75
LRPPRC-208ENST00000472420 CCDC24Q8N4L8 307 aa10.37□□□□□ -0.75
LRPPRC-208ENST00000472420 STXBP5LQ9Y2K9 1186 aa10.37□□□□□ -0.75
LRPPRC-208ENST00000472420 CD44P16070 742 aaKnown RBP10.36□□□□□ -0.75
LRPPRC-208ENST00000472420 STYK1Q6J9G0 422 aa10.36□□□□□ -0.75
LRPPRC-208ENST00000472420 ANKRD13DQ6ZTN6 518 aa10.36□□□□□ -0.75
LRPPRC-208ENST00000472420 HTTP42858 3142 aa10.36□□□□□ -0.75
LRPPRC-208ENST00000472420 IARSP41252 1262 aaKnown RBP10.35□□□□□ -0.75
LRPPRC-208ENST00000472420 EIF6P56537 245 aaKnown RBP10.35□□□□□ -0.75
LRPPRC-208ENST00000472420 NOM1Q5C9Z4 860 aaKnown RBP10.35□□□□□ -0.75
LRPPRC-208ENST00000472420 C7orf43Q8WVR3 580 aa10.35□□□□□ -0.75
LRPPRC-208ENST00000472420 SNX27Q96L92 541 aa10.35□□□□□ -0.75
LRPPRC-208ENST00000472420 PRO3102Q9H379 93 aa10.35□□□□□ -0.75
LRPPRC-208ENST00000472420 NARFQ9UHQ1 456 aa10.35□□□□□ -0.75
LRPPRC-208ENST00000472420 SPG7Q9UQ90 795 aa10.35□□□□□ -0.75
LRPPRC-208ENST00000472420 TJP1Q07157 1748 aa10.35□□□□□ -0.75
LRPPRC-208ENST00000472420 EDC4Q6P2E9 1401 aaKnown RBP10.34□□□□□ -0.75
LRPPRC-208ENST00000472420 LAMA3Q16787 3333 aa10.34□□□□□ -0.75
LRPPRC-208ENST00000472420 PIEZO1Q92508 2521 aa10.34□□□□□ -0.75
LRPPRC-208ENST00000472420 SOX1O00570 391 aaPredicted RBP10.34□□□□□ -0.75
LRPPRC-208ENST00000472420 SLC10A3P09131 477 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms