RNA–Protein interactions for RNA: ENST00000466539.1

PSME4-204, Transcript of proteasome activator subunit 4, humanhuman

TSL 4

Gene PSME4, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME4-204ENST00000466539 SOX11P35716 441 aa8.78□□□□□ -1
PSME4-204ENST00000466539 MCCD1P59942 119 aaPredicted RBP8.78□□□□□ -1
PSME4-204ENST00000466539 NR5A1Q13285 461 aa8.78□□□□□ -1
PSME4-204ENST00000466539 NBPF20Q3BBV1 942 aa8.78□□□□□ -1
PSME4-204ENST00000466539 CCDC85AQ96PX6 553 aaPredicted RBP8.78□□□□□ -1
PSME4-204ENST00000466539 TMPRSS4Q9NRS4 437 aa8.78□□□□□ -1
PSME4-204ENST00000466539 CDV3Q9UKY7 258 aaKnown RBP8.78□□□□□ -1
PSME4-204ENST00000466539 CEP170BQ9Y4F5 1589 aaPredicted RBP8.78□□□□□ -1
PSME4-204ENST00000466539 PTPRMP28827 1452 aa8.77□□□□□ -1
PSME4-204ENST00000466539 ERVH48-1M5A8F1 160 aa8.77□□□□□ -1.01
PSME4-204ENST00000466539 PPP1R26Q5T8A7 1209 aaPredicted RBP8.76□□□□□ -1.01
PSME4-204ENST00000466539 ERICH6Q7L0X2 663 aa8.76□□□□□ -1.01
PSME4-204ENST00000466539 CALR3Q96L12 384 aaKnown RBP8.76□□□□□ -1.01
PSME4-204ENST00000466539 LCE2BO14633 110 aa8.75□□□□□ -1.01
PSME4-204ENST00000466539 CCDC116Q8IYX3 515 aa8.75□□□□□ -1.01
PSME4-204ENST00000466539 DCAF11Q8TEB1 546 aa8.75□□□□□ -1.01
PSME4-204ENST00000466539 CDCA7Q9BWT1 371 aaPredicted RBP8.75□□□□□ -1.01
PSME4-204ENST00000466539 ADGRF5Q8IZF2 1346 aa8.75□□□□□ -1.01
PSME4-204ENST00000466539 TMEM2Q9UHN6 1383 aa8.74□□□□□ -1.01
PSME4-204ENST00000466539 KNDC1Q76NI1 1749 aa8.74□□□□□ -1.01
PSME4-204ENST00000466539 AVPP01185 164 aa8.74□□□□□ -1.01
PSME4-204ENST00000466539 MLECQ14165 292 aa8.74□□□□□ -1.01
PSME4-204ENST00000466539 TBC1D9Q6ZT07 1266 aa8.74□□□□□ -1.01
PSME4-204ENST00000466539 ITPKCQ96DU7 683 aa8.74□□□□□ -1.01
PSME4-204ENST00000466539 ZFAND3Q9H8U3 227 aa8.74□□□□□ -1.01
PSME4-204ENST00000466539 C14orf93Q9H972 538 aaKnown RBP8.74□□□□□ -1.01
PSME4-204ENST00000466539 ARID4BQ4LE39 1312 aaPredicted RBP8.74□□□□□ -1.01
PSME4-204ENST00000466539 ARHGEF28Q8N1W1 1705 aaKnown RBP8.74□□□□□ -1.01
PSME4-204ENST00000466539 SBNO2Q9Y2G9 1366 aa8.73□□□□□ -1.01
PSME4-204ENST00000466539 ALKQ9UM73 1620 aa8.73□□□□□ -1.01
PSME4-204ENST00000466539 DGAT1O75907 488 aa8.73□□□□□ -1.01
PSME4-204ENST00000466539 TIMP2P16035 220 aa8.73□□□□□ -1.01
PSME4-204ENST00000466539 SLFNL1Q499Z3 407 aa8.73□□□□□ -1.01
PSME4-204ENST00000466539 TRAF7Q6Q0C0 670 aa8.73□□□□□ -1.01
PSME4-204ENST00000466539 RNF135Q8IUD6 432 aa8.73□□□□□ -1.01
PSME4-204ENST00000466539 SEPT12Q8IYM1 358 aa8.73□□□□□ -1.01
PSME4-204ENST00000466539 RIMS2Q9UQ26 1411 aa8.72□□□□□ -1.01
PSME4-204ENST00000466539 SCAF11Q99590 1463 aaKnown RBP8.72□□□□□ -1.01
PSME4-204ENST00000466539 DLC1Q96QB1 1528 aa8.72□□□□□ -1.01
PSME4-204ENST00000466539 LILRA1O75019 489 aa8.72□□□□□ -1.01
PSME4-204ENST00000466539 ZIC2O95409 532 aaPredicted RBP8.72□□□□□ -1.01
PSME4-204ENST00000466539 SCTRP47872 440 aa8.72□□□□□ -1.01
PSME4-204ENST00000466539 WDR4P57081 412 aaKnown RBP8.72□□□□□ -1.01
PSME4-204ENST00000466539 MYT1Q01538 1121 aa8.72□□□□□ -1.01
PSME4-204ENST00000466539 RGL3Q3MIN7 710 aa8.72□□□□□ -1.01
PSME4-204ENST00000466539 PKDCCQ504Y2 493 aa8.72□□□□□ -1.01
PSME4-204ENST00000466539 ZNF784Q8NCA9 323 aaPredicted RBP8.72□□□□□ -1.01
PSME4-204ENST00000466539 DIP2AQ14689 1571 aa8.72□□□□□ -1.01
PSME4-204ENST00000466539 TECPR2O15040 1411 aa8.71□□□□□ -1.01
PSME4-204ENST00000466539 ADAMTS13Q76LX8 1427 aa8.71□□□□□ -1.01
PSME4-204ENST00000466539 ADD1P35611 737 aaKnown RBP8.71□□□□□ -1.02
PSME4-204ENST00000466539 CEBPAP49715 358 aaPredicted RBP8.71□□□□□ -1.02
PSME4-204ENST00000466539 CBLBQ13191 982 aa8.71□□□□□ -1.02
PSME4-204ENST00000466539 NBPF1Q3BBV0 1214 aa8.71□□□□□ -1.02
PSME4-204ENST00000466539 ZNF592Q92610 1267 aa8.71□□□□□ -1.02
PSME4-204ENST00000466539 TFIP11Q9UBB9 837 aaKnown RBP8.71□□□□□ -1.02
PSME4-204ENST00000466539 PCDHB11Q9Y5F2 797 aa8.71□□□□□ -1.02
PSME4-204ENST00000466539 USP47Q96K76 1375 aa8.71□□□□□ -1.02
PSME4-204ENST00000466539 PLEKHG1Q9ULL1 1385 aa8.71□□□□□ -1.02
PSME4-204ENST00000466539 ST8SIA5O15466 376 aa8.7□□□□□ -1.02
PSME4-204ENST00000466539 SKIP12755 728 aa8.7□□□□□ -1.02
PSME4-204ENST00000466539 RNF20Q5VTR2 975 aa8.7□□□□□ -1.02
PSME4-204ENST00000466539 PLPP7Q8NBV4 271 aa8.7□□□□□ -1.02
PSME4-204ENST00000466539 PPP1R12CQ9BZL4 782 aa8.7□□□□□ -1.02
PSME4-204ENST00000466539 ESF1Q9H501 851 aaKnown RBP8.7□□□□□ -1.02
PSME4-204ENST00000466539 DACH1Q9UI36 760 aa8.7□□□□□ -1.02
PSME4-204ENST00000466539 EMILIN1Q9Y6C2 1016 aa8.7□□□□□ -1.02
PSME4-204ENST00000466539 XRN1Q8IZH2 1706 aaKnown RBP8.69□□□□□ -1.02
PSME4-204ENST00000466539 PALM3A6NDB9 673 aaPredicted RBP8.69□□□□□ -1.02
PSME4-204ENST00000466539 DHX9Q08211 1270 aaKnown RBP8.69□□□□□ -1.02
PSME4-204ENST00000466539 DEPDC4Q8N2C3 294 aa8.69□□□□□ -1.02
PSME4-204ENST00000466539 TESK2Q96S53 571 aa8.69□□□□□ -1.02
PSME4-204ENST00000466539 CYLDQ9NQC7 956 aa8.69□□□□□ -1.02
PSME4-204ENST00000466539 ROCK2O75116 1388 aaKnown RBP8.69□□□□□ -1.02
PSME4-204ENST00000466539 CPS1P31327 1500 aa8.69□□□□□ -1.02
PSME4-204ENST00000466539 CAPN5O15484 640 aaPredicted RBP8.68□□□□□ -1.02
PSME4-204ENST00000466539 HSPA5P11021 654 aaKnown RBP8.68□□□□□ -1.02
PSME4-204ENST00000466539 ERVK-9P63128 1117 aa8.68□□□□□ -1.02
PSME4-204ENST00000466539 CFAP70Q5T0N1 1121 aa8.68□□□□□ -1.02
PSME4-204ENST00000466539 CCDC82Q8N4S0 544 aa8.68□□□□□ -1.02
PSME4-204ENST00000466539 KDF1Q8NAX2 398 aaPredicted RBP8.68□□□□□ -1.02
PSME4-204ENST00000466539 AAASQ9NRG9 546 aa8.68□□□□□ -1.02
PSME4-204ENST00000466539 CHD2O14647 1828 aaKnown RBP8.67□□□□□ -1.02
PSME4-204ENST00000466539 ATP9BO43861 1147 aa8.67□□□□□ -1.02
PSME4-204ENST00000466539 LTKP29376 864 aa8.67□□□□□ -1.02
PSME4-204ENST00000466539 SMCPP49901 116 aaPredicted RBP8.67□□□□□ -1.02
PSME4-204ENST00000466539 NFATC2IPQ8NCF5 419 aa8.67□□□□□ -1.02
PSME4-204ENST00000466539 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.67□□□□□ -1.02
PSME4-204ENST00000466539 DOLKQ9UPQ8 538 aa8.67□□□□□ -1.02
PSME4-204ENST00000466539 MYOM1P52179 1685 aa8.66□□□□□ -1.02
PSME4-204ENST00000466539 QRICH2Q9H0J4 1663 aa8.66□□□□□ -1.02
PSME4-204ENST00000466539 LMTK3Q96Q04 1460 aa8.66□□□□□ -1.02
PSME4-204ENST00000466539 ABCC11Q96J66 1382 aa8.66□□□□□ -1.02
PSME4-204ENST00000466539 WASHC2AQ641Q2 1341 aa8.66□□□□□ -1.02
PSME4-204ENST00000466539 USP17L5A8MUK1 530 aa8.66□□□□□ -1.02
PSME4-204ENST00000466539 C11orf95C9JLR9 678 aaPredicted RBP8.66□□□□□ -1.02
PSME4-204ENST00000466539 NCOA4Q13772 614 aa8.66□□□□□ -1.02
PSME4-204ENST00000466539 OXLD1Q5BKU9 147 aa8.66□□□□□ -1.02
PSME4-204ENST00000466539 Q6ZVU0 165 aa8.66□□□□□ -1.02
PSME4-204ENST00000466539 CRIPAKQ8N1N5 446 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms