RNA–Protein interactions for RNA: ENST00000463003.1

CHAMP1-202, Transcript of chromosome alignment maintaining phosphoprotein 1, humanhuman

TSL 3

Gene CHAMP1, Length 596 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1-202ENST00000463003 ELOA3BQ3SY89 546 aa8.36□□□□□ -1.07
CHAMP1-202ENST00000463003 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.36□□□□□ -1.07
CHAMP1-202ENST00000463003 ELOA3Q8NG57 546 aa8.36□□□□□ -1.07
CHAMP1-202ENST00000463003 NEUROD4Q9HD90 331 aa8.36□□□□□ -1.07
CHAMP1-202ENST00000463003 ZNF777Q9ULD5 760 aaPredicted RBP8.36□□□□□ -1.07
CHAMP1-202ENST00000463003 EML1O00423 815 aa8.35□□□□□ -1.07
CHAMP1-202ENST00000463003 TRIM50Q86XT4 487 aa8.35□□□□□ -1.07
CHAMP1-202ENST00000463003 ZDHHC1Q8WTX9 485 aa8.35□□□□□ -1.07
CHAMP1-202ENST00000463003 PLVAPQ9BX97 442 aa8.35□□□□□ -1.07
CHAMP1-202ENST00000463003 ZMYND15Q9H091 742 aa8.35□□□□□ -1.07
CHAMP1-202ENST00000463003 STRN4Q9NRL3 753 aa8.35□□□□□ -1.07
CHAMP1-202ENST00000463003 USP17L5A8MUK1 530 aa8.34□□□□□ -1.07
CHAMP1-202ENST00000463003 SIN3BO75182 1162 aa8.34□□□□□ -1.07
CHAMP1-202ENST00000463003 EPHA4P54764 986 aa8.34□□□□□ -1.07
CHAMP1-202ENST00000463003 SYT9Q86SS6 491 aa8.34□□□□□ -1.07
CHAMP1-202ENST00000463003 SLC9A9Q8IVB4 645 aa8.34□□□□□ -1.07
CHAMP1-202ENST00000463003 DEPDC4Q8N2C3 294 aa8.34□□□□□ -1.07
CHAMP1-202ENST00000463003 TRIM11Q96F44 468 aa8.34□□□□□ -1.07
CHAMP1-202ENST00000463003 ZNF232Q9UNY5 417 aa8.34□□□□□ -1.07
CHAMP1-202ENST00000463003 SERTM1A2A2V5 107 aa8.33□□□□□ -1.08
CHAMP1-202ENST00000463003 LRRC69Q6ZNQ3 347 aa8.33□□□□□ -1.08
CHAMP1-202ENST00000463003 CALR3Q96L12 384 aaKnown RBP8.33□□□□□ -1.08
CHAMP1-202ENST00000463003 ADARB2-AS1A8MUL3 147 aa8.32□□□□□ -1.08
CHAMP1-202ENST00000463003 ATP1A2P50993 1020 aa8.32□□□□□ -1.08
CHAMP1-202ENST00000463003 NEUROD1Q13562 356 aa8.32□□□□□ -1.08
CHAMP1-202ENST00000463003 PRRT3Q5FWE3 981 aa8.32□□□□□ -1.08
CHAMP1-202ENST00000463003 Q8N3U1 123 aa8.32□□□□□ -1.08
CHAMP1-202ENST00000463003 CHMP3Q9Y3E7 222 aa8.32□□□□□ -1.08
CHAMP1-202ENST00000463003 GATA4P43694 442 aa8.31□□□□□ -1.08
CHAMP1-202ENST00000463003 RHPN1Q8TCX5 695 aa8.31□□□□□ -1.08
CHAMP1-202ENST00000463003 MDFIQ99750 246 aa8.31□□□□□ -1.08
CHAMP1-202ENST00000463003 USP17L3A6NCW0 530 aa8.3□□□□□ -1.08
CHAMP1-202ENST00000463003 USP17L4A6NCW7 530 aa8.3□□□□□ -1.08
CHAMP1-202ENST00000463003 ATP9BO43861 1147 aa8.3□□□□□ -1.08
CHAMP1-202ENST00000463003 PSMA6P60900 246 aaKnown RBP8.3□□□□□ -1.08
CHAMP1-202ENST00000463003 C1orf53Q5VUE5 145 aa8.3□□□□□ -1.08
CHAMP1-202ENST00000463003 USP17L2Q6R6M4 530 aa8.3□□□□□ -1.08
CHAMP1-202ENST00000463003 USP17L1Q7RTZ2 530 aa8.3□□□□□ -1.08
CHAMP1-202ENST00000463003 C14orf37Q86TY3 774 aa8.3□□□□□ -1.08
CHAMP1-202ENST00000463003 PLEKHM2Q8IWE5 1019 aa8.3□□□□□ -1.08
CHAMP1-202ENST00000463003 TNS4Q8IZW8 715 aa8.3□□□□□ -1.08
CHAMP1-202ENST00000463003 TNFRSF25Q93038 417 aa8.3□□□□□ -1.08
CHAMP1-202ENST00000463003 ANKIB1Q9P2G1 1089 aa8.3□□□□□ -1.08
CHAMP1-202ENST00000463003 DOC2BQ14184 412 aa8.29□□□□□ -1.08
CHAMP1-202ENST00000463003 TBCELQ5QJ74 424 aa8.29□□□□□ -1.08
CHAMP1-202ENST00000463003 TPCN2Q8NHX9 752 aa8.29□□□□□ -1.08
CHAMP1-202ENST00000463003 C7orf43Q8WVR3 580 aa8.29□□□□□ -1.08
CHAMP1-202ENST00000463003 PRDM6Q9NQX0 595 aa8.29□□□□□ -1.08
CHAMP1-202ENST00000463003 TFIP11Q9UBB9 837 aaKnown RBP8.29□□□□□ -1.08
CHAMP1-202ENST00000463003 PALM3A6NDB9 673 aaPredicted RBP8.28□□□□□ -1.08
CHAMP1-202ENST00000463003 APBA3O96018 575 aa8.28□□□□□ -1.08
CHAMP1-202ENST00000463003 HIRAP54198 1017 aaPredicted RBP8.28□□□□□ -1.08
CHAMP1-202ENST00000463003 M0R082 166 aa8.27□□□□□ -1.09
CHAMP1-202ENST00000463003 M0R2N6 131 aa8.27□□□□□ -1.09
CHAMP1-202ENST00000463003 SPEM2Q0P670 501 aa8.27□□□□□ -1.09
CHAMP1-202ENST00000463003 SFSWAPQ12872 951 aaKnown RBP8.27□□□□□ -1.09
CHAMP1-202ENST00000463003 CCDC102BQ68D86 513 aa8.27□□□□□ -1.09
CHAMP1-202ENST00000463003 ZNF417Q8TAU3 575 aa8.27□□□□□ -1.09
CHAMP1-202ENST00000463003 ZNF587Q96SQ5 575 aaPredicted RBP8.27□□□□□ -1.09
CHAMP1-202ENST00000463003 PPP1R12CQ9BZL4 782 aa8.27□□□□□ -1.09
CHAMP1-202ENST00000463003 SEMA6BQ9H3T3 888 aa8.27□□□□□ -1.09
CHAMP1-202ENST00000463003 POTEAQ6S8J7 498 aa8.26□□□□□ -1.09
CHAMP1-202ENST00000463003 LARGE2Q8N3Y3 721 aa8.26□□□□□ -1.09
CHAMP1-202ENST00000463003 CEP63Q96MT8 703 aa8.26□□□□□ -1.09
CHAMP1-202ENST00000463003 NACC1Q96RE7 527 aa8.26□□□□□ -1.09
CHAMP1-202ENST00000463003 SLC30A3Q99726 388 aa8.26□□□□□ -1.09
CHAMP1-202ENST00000463003 BRD7Q9NPI1 651 aa8.26□□□□□ -1.09
CHAMP1-202ENST00000463003 MAFBQ9Y5Q3 323 aaPredicted RBP8.26□□□□□ -1.09
CHAMP1-202ENST00000463003 ARID3CA6NKF2 412 aa8.25□□□□□ -1.09
CHAMP1-202ENST00000463003 ZBTB7BO15156 539 aaPredicted RBP8.25□□□□□ -1.09
CHAMP1-202ENST00000463003 ADH7P40394 386 aa8.25□□□□□ -1.09
CHAMP1-202ENST00000463003 KCNQ4P56696 695 aa8.25□□□□□ -1.09
CHAMP1-202ENST00000463003 SH3PXD2AQ5TCZ1 1133 aa8.25□□□□□ -1.09
CHAMP1-202ENST00000463003 TSPAN10Q9H1Z9 355 aaPredicted RBP8.25□□□□□ -1.09
CHAMP1-202ENST00000463003 KIAA1024Q9UPX6 916 aa8.25□□□□□ -1.09
CHAMP1-202ENST00000463003 CLDN10P78369 228 aa8.24□□□□□ -1.09
CHAMP1-202ENST00000463003 TRIM28Q13263 835 aaKnown RBP8.24□□□□□ -1.09
CHAMP1-202ENST00000463003 MICALL1Q8N3F8 863 aa8.24□□□□□ -1.09
CHAMP1-202ENST00000463003 PHACTR1Q9C0D0 580 aa8.24□□□□□ -1.09
CHAMP1-202ENST00000463003 MKRN1Q9UHC7 482 aaKnown RBP8.24□□□□□ -1.09
CHAMP1-202ENST00000463003 KCNH4Q9UQ05 1017 aa8.24□□□□□ -1.09
CHAMP1-202ENST00000463003 RBM19Q9Y4C8 960 aaKnown RBP8.24□□□□□ -1.09
CHAMP1-202ENST00000463003 ALBP02768 609 aa8.23□□□□□ -1.09
CHAMP1-202ENST00000463003 HIF1AQ16665 826 aa8.23□□□□□ -1.09
CHAMP1-202ENST00000463003 CFAP70Q5T0N1 1121 aa8.23□□□□□ -1.09
CHAMP1-202ENST00000463003 OGFOD1Q8N543 542 aa8.23□□□□□ -1.09
CHAMP1-202ENST00000463003 STARD13Q9Y3M8 1113 aa8.23□□□□□ -1.09
CHAMP1-202ENST00000463003 HCN4Q9Y3Q4 1203 aa8.23□□□□□ -1.09
CHAMP1-202ENST00000463003 SFI1A8K8P3 1242 aa8.22□□□□□ -1.09
CHAMP1-202ENST00000463003 ITGB7P26010 798 aa8.22□□□□□ -1.09
CHAMP1-202ENST00000463003 LMOD1P29536 600 aaPredicted RBP8.22□□□□□ -1.09
CHAMP1-202ENST00000463003 TYRO3Q06418 890 aa8.22□□□□□ -1.09
CHAMP1-202ENST00000463003 COL9A3Q14050 684 aaPredicted RBP8.22□□□□□ -1.09
CHAMP1-202ENST00000463003 SIX5Q8N196 739 aa8.22□□□□□ -1.09
CHAMP1-202ENST00000463003 HSH2DQ96JZ2 352 aa8.22□□□□□ -1.09
CHAMP1-202ENST00000463003 SUSD3Q96L08 255 aa8.22□□□□□ -1.09
CHAMP1-202ENST00000463003 RSPO4Q2I0M5 234 aaPredicted RBP8.21□□□□□ -1.1
CHAMP1-202ENST00000463003 ZMYM1Q5SVZ6 1142 aa8.21□□□□□ -1.1
CHAMP1-202ENST00000463003 EFCC1Q9HA90 598 aa8.21□□□□□ -1.1
CHAMP1-202ENST00000463003 PPP1R12BO60237 982 aaPredicted RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms