RNA–Protein interactions for RNA: ENST00000461780.1

PPARGC1B-206, Transcript of PPARG coactivator 1 beta, humanhuman

TSL 4

Gene PPARGC1B, Length 566 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-206ENST00000461780 PRPF40BQ6NWY9 871 aaKnown RBP20.52■□□□□ 0.88
PPARGC1B-206ENST00000461780 USP16Q9Y5T5 823 aa20.52■□□□□ 0.88
PPARGC1B-206ENST00000461780 PRAMEF22A3QJZ6 481 aa20.51■□□□□ 0.87
PPARGC1B-206ENST00000461780 TEFQ10587 303 aa20.51■□□□□ 0.87
PPARGC1B-206ENST00000461780 CHADLQ6NUI6 762 aa20.51■□□□□ 0.87
PPARGC1B-206ENST00000461780 GAS2L2Q8NHY3 880 aa20.51■□□□□ 0.87
PPARGC1B-206ENST00000461780 L3MBTL3Q96JM7 780 aaPredicted RBP20.51■□□□□ 0.87
PPARGC1B-206ENST00000461780 FMNL2Q96PY5 1086 aa20.51■□□□□ 0.87
PPARGC1B-206ENST00000461780 TAOK3Q9H2K8 898 aa20.51■□□□□ 0.87
PPARGC1B-206ENST00000461780 CREBZFQ9NS37 354 aa20.51■□□□□ 0.87
PPARGC1B-206ENST00000461780 CAPN15O75808 1086 aa20.5■□□□□ 0.87
PPARGC1B-206ENST00000461780 CNBD1Q8NA66 436 aa20.5■□□□□ 0.87
PPARGC1B-206ENST00000461780 CNKSR1Q969H4 720 aa20.49■□□□□ 0.87
PPARGC1B-206ENST00000461780 MASTLQ96GX5 879 aa20.49■□□□□ 0.87
PPARGC1B-206ENST00000461780 SETDB2Q96T68 719 aa20.49■□□□□ 0.87
PPARGC1B-206ENST00000461780 RSPH6AQ9H0K4 717 aa20.49■□□□□ 0.87
PPARGC1B-206ENST00000461780 PIP4K2AP48426 406 aaPredicted RBP20.48■□□□□ 0.87
PPARGC1B-206ENST00000461780 LAMB4A4D0S4 1761 aa20.48■□□□□ 0.87
PPARGC1B-206ENST00000461780 NUP98P52948 1817 aa20.48■□□□□ 0.87
PPARGC1B-206ENST00000461780 ITGBL1O95965 494 aaPredicted RBP20.47■□□□□ 0.87
PPARGC1B-206ENST00000461780 DZIP3Q86Y13 1208 aaKnown RBP20.47■□□□□ 0.87
PPARGC1B-206ENST00000461780 CNTNAP1P78357 1384 aa20.46■□□□□ 0.87
PPARGC1B-206ENST00000461780 COL4A5P29400 1685 aa20.46■□□□□ 0.87
PPARGC1B-206ENST00000461780 NBPF26B4DH59 902 aa20.46■□□□□ 0.87
PPARGC1B-206ENST00000461780 NBPF10Q6P3W6 841 aaKnown RBP20.46■□□□□ 0.87
PPARGC1B-206ENST00000461780 CLEC4GQ6UXB4 293 aa20.46■□□□□ 0.87
PPARGC1B-206ENST00000461780 NBPF15Q8N660 670 aa20.46■□□□□ 0.87
PPARGC1B-206ENST00000461780 ZNF330Q9Y3S2 320 aaPredicted RBP20.46■□□□□ 0.87
PPARGC1B-206ENST00000461780 DLG5Q8TDM6 1919 aa20.46■□□□□ 0.87
PPARGC1B-206ENST00000461780 LTBP1Q14766 1721 aa20.45■□□□□ 0.86
PPARGC1B-206ENST00000461780 U2SURPO15042 1029 aaKnown RBP20.45■□□□□ 0.86
PPARGC1B-206ENST00000461780 OLFM4Q6UX06 510 aa20.45■□□□□ 0.86
PPARGC1B-206ENST00000461780 TAF1DQ9H5J8 278 aaPredicted RBP20.45■□□□□ 0.86
PPARGC1B-206ENST00000461780 MKRN1Q9UHC7 482 aaKnown RBP20.45■□□□□ 0.86
PPARGC1B-206ENST00000461780 BTBD11A6QL63 1104 aa20.44■□□□□ 0.86
PPARGC1B-206ENST00000461780 RGL2O15211 777 aa20.44■□□□□ 0.86
PPARGC1B-206ENST00000461780 ZNF541Q9H0D2 1346 aa20.44■□□□□ 0.86
PPARGC1B-206ENST00000461780 KDM3BQ7LBC6 1761 aa20.44■□□□□ 0.86
PPARGC1B-206ENST00000461780 FOXN1O15353 648 aa20.43■□□□□ 0.86
PPARGC1B-206ENST00000461780 PRKAR2BP31323 418 aa20.43■□□□□ 0.86
PPARGC1B-206ENST00000461780 ST5P78524 1137 aa20.43■□□□□ 0.86
PPARGC1B-206ENST00000461780 SOGA3Q5TF21 947 aa20.43■□□□□ 0.86
PPARGC1B-206ENST00000461780 LDHDQ86WU2 507 aa20.42■□□□□ 0.86
PPARGC1B-206ENST00000461780 NPR1P16066 1061 aa20.41■□□□□ 0.86
PPARGC1B-206ENST00000461780 FKBP4Q02790 459 aaKnown RBP eCLIP20.41■□□□□ 0.86
PPARGC1B-206ENST00000461780 CCDC93Q567U6 631 aa20.4■□□□□ 0.86
PPARGC1B-206ENST00000461780 THSD7BQ9C0I4 1608 aa20.4■□□□□ 0.86
PPARGC1B-206ENST00000461780 IQCA1LA6NCM1 817 aa20.39■□□□□ 0.85
PPARGC1B-206ENST00000461780 FZD9O00144 591 aa20.39■□□□□ 0.85
PPARGC1B-206ENST00000461780 SNRPA1P09661 255 aaKnown RBP20.39■□□□□ 0.85
PPARGC1B-206ENST00000461780 HLFQ16534 295 aa20.39■□□□□ 0.85
PPARGC1B-206ENST00000461780 MCM10Q7L590 875 aa20.39■□□□□ 0.85
PPARGC1B-206ENST00000461780 NBPF5PQ86XG9 351 aaPredicted RBP20.39■□□□□ 0.85
PPARGC1B-206ENST00000461780 ZNF277Q9NRM2 450 aaPredicted RBP20.39■□□□□ 0.85
PPARGC1B-206ENST00000461780 VEGFBP49765 207 aa20.38■□□□□ 0.85
PPARGC1B-206ENST00000461780 CRY2Q49AN0 593 aa20.37■□□□□ 0.85
PPARGC1B-206ENST00000461780 PRDM10Q9NQV6 1147 aa20.37■□□□□ 0.85
PPARGC1B-206ENST00000461780 ABCC12Q96J65 1359 aa20.36■□□□□ 0.85
PPARGC1B-206ENST00000461780 DCTN1Q14203 1278 aa20.36■□□□□ 0.85
PPARGC1B-206ENST00000461780 CCER1Q8TC90 406 aaPredicted RBP20.36■□□□□ 0.85
PPARGC1B-206ENST00000461780 WBP1LQ9NX94 342 aa20.36■□□□□ 0.85
PPARGC1B-206ENST00000461780 NIP7Q9Y221 180 aaKnown RBP eCLIP20.36■□□□□ 0.85
PPARGC1B-206ENST00000461780 TRPM7Q96QT4 1865 aa20.36■□□□□ 0.85
PPARGC1B-206ENST00000461780 RIC1Q4ADV7 1423 aa20.36■□□□□ 0.85
PPARGC1B-206ENST00000461780 TMEM88BA6NKF7 163 aa20.35■□□□□ 0.85
PPARGC1B-206ENST00000461780 TPTE2Q6XPS3 522 aa20.35■□□□□ 0.85
PPARGC1B-206ENST00000461780 SLC51AQ86UW1 340 aa20.35■□□□□ 0.85
PPARGC1B-206ENST00000461780 RASSF10A6NK89 507 aa20.34■□□□□ 0.85
PPARGC1B-206ENST00000461780 EPHX2P34913 555 aa20.34■□□□□ 0.85
PPARGC1B-206ENST00000461780 HACL1Q9UJ83 578 aa20.34■□□□□ 0.85
PPARGC1B-206ENST00000461780 ZNF652Q9Y2D9 606 aa20.34■□□□□ 0.85
PPARGC1B-206ENST00000461780 RNF123Q5XPI4 1314 aa20.33■□□□□ 0.85
PPARGC1B-206ENST00000461780 IARSP41252 1262 aaKnown RBP20.33■□□□□ 0.85
PPARGC1B-206ENST00000461780 RTKN2Q8IZC4 609 aa20.33■□□□□ 0.85
PPARGC1B-206ENST00000461780 PSMD1Q99460 953 aa20.33■□□□□ 0.85
PPARGC1B-206ENST00000461780 HTATSF1O43719 755 aaKnown RBP20.32■□□□□ 0.84
PPARGC1B-206ENST00000461780 SYNE4Q8N205 404 aa20.32■□□□□ 0.84
PPARGC1B-206ENST00000461780 NPHP1O15259 732 aa20.31■□□□□ 0.84
PPARGC1B-206ENST00000461780 PPP2R1AP30153 589 aa20.31■□□□□ 0.84
PPARGC1B-206ENST00000461780 CNGB1Q14028 1251 aaPredicted RBP20.31■□□□□ 0.84
PPARGC1B-206ENST00000461780 NPM2Q86SE8 214 aaKnown RBP20.31■□□□□ 0.84
PPARGC1B-206ENST00000461780 GPC2Q8N158 579 aa20.31■□□□□ 0.84
PPARGC1B-206ENST00000461780 LAMB2P55268 1798 aa20.31■□□□□ 0.84
PPARGC1B-206ENST00000461780 HOXA10P31260 410 aaPredicted RBP20.3■□□□□ 0.84
PPARGC1B-206ENST00000461780 EAPPQ56P03 285 aaPredicted RBP20.3■□□□□ 0.84
PPARGC1B-206ENST00000461780 MAP1SQ66K74 1059 aaPredicted RBP20.3■□□□□ 0.84
PPARGC1B-206ENST00000461780 CNTROBQ8N137 903 aa20.3■□□□□ 0.84
PPARGC1B-206ENST00000461780 UBN2Q6ZU65 1347 aa20.29■□□□□ 0.84
PPARGC1B-206ENST00000461780 ALDH1B1P30837 517 aa20.29■□□□□ 0.84
PPARGC1B-206ENST00000461780 CTCFP49711 727 aaPredicted RBP20.29■□□□□ 0.84
PPARGC1B-206ENST00000461780 TAF7Q15545 349 aaPredicted RBP20.29■□□□□ 0.84
PPARGC1B-206ENST00000461780 PNMA8AQ86V59 439 aaPredicted RBP20.29■□□□□ 0.84
PPARGC1B-206ENST00000461780 MIS18AQ9NYP9 233 aa20.29■□□□□ 0.84
PPARGC1B-206ENST00000461780 IBTKQ9P2D0 1353 aaPredicted RBP20.29■□□□□ 0.84
PPARGC1B-206ENST00000461780 FAM177BA6PVY3 158 aa20.28■□□□□ 0.84
PPARGC1B-206ENST00000461780 ERVV-1B6SEH8 477 aa20.28■□□□□ 0.84
PPARGC1B-206ENST00000461780 U2AF1L5P0DN76 240 aaPredicted RBP20.28■□□□□ 0.84
PPARGC1B-206ENST00000461780 U2AF1Q01081 240 aaKnown RBP eCLIP20.28■□□□□ 0.84
PPARGC1B-206ENST00000461780 NUTM1Q86Y26 1132 aa20.28■□□□□ 0.84
PPARGC1B-206ENST00000461780 HSPA8P11142 646 aaKnown RBP20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms