RNA–Protein interactions for RNA: ENST00000461708.1

SSB-206, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-206ENST00000461708 CCDC88AQ3V6T2 1871 aa23.68■■□□□ 1.38
SSB-206ENST00000461708 PRELPP51888 382 aa23.68■■□□□ 1.38
SSB-206ENST00000461708 FER1L6Q2WGJ9 1857 aa23.68■■□□□ 1.38
SSB-206ENST00000461708 LAMB4A4D0S4 1761 aa23.68■■□□□ 1.38
SSB-206ENST00000461708 LTBP3Q9NS15 1303 aa23.67■■□□□ 1.38
SSB-206ENST00000461708 NPHP1O15259 732 aa23.67■■□□□ 1.38
SSB-206ENST00000461708 SRGNP10124 158 aa23.67■■□□□ 1.38
SSB-206ENST00000461708 PIP4K2AP48426 406 aaPredicted RBP23.67■■□□□ 1.38
SSB-206ENST00000461708 NFE2L2Q16236 605 aa23.67■■□□□ 1.38
SSB-206ENST00000461708 RRAGCQ9HB90 399 aa23.67■■□□□ 1.38
SSB-206ENST00000461708 KDM3BQ7LBC6 1761 aa23.67■■□□□ 1.38
SSB-206ENST00000461708 GLTPD2A6NH11 291 aa23.66■■□□□ 1.38
SSB-206ENST00000461708 NBPF5PQ86XG9 351 aaPredicted RBP23.66■■□□□ 1.38
SSB-206ENST00000461708 ARFGEF2Q9Y6D5 1785 aa23.65■■□□□ 1.38
SSB-206ENST00000461708 DICER1Q9UPY3 1922 aaKnown RBP23.65■■□□□ 1.38
SSB-206ENST00000461708 SOGA3Q5TF21 947 aa23.65■■□□□ 1.38
SSB-206ENST00000461708 CCDC24Q8N4L8 307 aa23.65■■□□□ 1.38
SSB-206ENST00000461708 MASTLQ96GX5 879 aa23.65■■□□□ 1.38
SSB-206ENST00000461708 TIAM2Q8IVF5 1701 aa23.64■■□□□ 1.38
SSB-206ENST00000461708 KLRG2A4D1S0 409 aaPredicted RBP23.64■■□□□ 1.37
SSB-206ENST00000461708 C21orf2O43822 256 aa23.64■■□□□ 1.37
SSB-206ENST00000461708 TPTE2Q6XPS3 522 aa23.64■■□□□ 1.37
SSB-206ENST00000461708 DNAJC5GQ8N7S2 189 aa23.64■■□□□ 1.37
SSB-206ENST00000461708 MIS18AQ9NYP9 233 aa23.64■■□□□ 1.37
SSB-206ENST00000461708 RALBP1Q15311 655 aa23.63■■□□□ 1.37
SSB-206ENST00000461708 SLX4Q8IY92 1834 aa23.63■■□□□ 1.37
SSB-206ENST00000461708 VEGFAP15692 232 aaPredicted RBP23.62■■□□□ 1.37
SSB-206ENST00000461708 PRPF40BQ6NWY9 871 aaKnown RBP23.62■■□□□ 1.37
SSB-206ENST00000461708 NIP7Q9Y221 180 aaKnown RBP eCLIP23.62■■□□□ 1.37
SSB-206ENST00000461708 MAPK8IP3Q9UPT6 1336 aa23.61■■□□□ 1.37
SSB-206ENST00000461708 EIF4A1P60842 406 aaKnown RBP23.61■■□□□ 1.37
SSB-206ENST00000461708 SMC1BQ8NDV3 1235 aa23.61■■□□□ 1.37
SSB-206ENST00000461708 TAOK3Q9H2K8 898 aa23.61■■□□□ 1.37
SSB-206ENST00000461708 WDR90Q96KV7 1748 aa23.6■■□□□ 1.37
SSB-206ENST00000461708 ERVV-1B6SEH8 477 aa23.6■■□□□ 1.37
SSB-206ENST00000461708 NPR1P16066 1061 aa23.6■■□□□ 1.37
SSB-206ENST00000461708 DPY19L2Q6NUT2 758 aa23.59■■□□□ 1.37
SSB-206ENST00000461708 C7orf43Q8WVR3 580 aa23.59■■□□□ 1.37
SSB-206ENST00000461708 ERFEQ4G0M1 354 aa23.58■■□□□ 1.37
SSB-206ENST00000461708 ZNF219Q9P2Y4 722 aaPredicted RBP23.58■■□□□ 1.37
SSB-206ENST00000461708 ERBB4Q15303 1308 aa23.58■■□□□ 1.36
SSB-206ENST00000461708 HLFQ16534 295 aa23.57■■□□□ 1.36
SSB-206ENST00000461708 BABAM1Q9NWV8 329 aa23.57■■□□□ 1.36
SSB-206ENST00000461708 CACNA1SQ13698 1873 aa23.57■■□□□ 1.36
SSB-206ENST00000461708 THUMPD2Q9BTF0 503 aaKnown RBP23.56■■□□□ 1.36
SSB-206ENST00000461708 NUP98P52948 1817 aa23.56■■□□□ 1.36
SSB-206ENST00000461708 MAP3K15Q6ZN16 1313 aa23.56■■□□□ 1.36
SSB-206ENST00000461708 NYXQ9GZU5 481 aa23.55■■□□□ 1.36
SSB-206ENST00000461708 CCDC93Q567U6 631 aa23.54■■□□□ 1.36
SSB-206ENST00000461708 IBTKQ9P2D0 1353 aaPredicted RBP23.53■■□□□ 1.36
SSB-206ENST00000461708 POTECB2RU33 542 aa23.53■■□□□ 1.36
SSB-206ENST00000461708 KIF6Q6ZMV9 814 aa23.53■■□□□ 1.36
SSB-206ENST00000461708 RIC1Q4ADV7 1423 aa23.52■■□□□ 1.36
SSB-206ENST00000461708 GTF2E1P29083 439 aaPredicted RBP23.52■■□□□ 1.36
SSB-206ENST00000461708 ALDH1B1P30837 517 aa23.52■■□□□ 1.36
SSB-206ENST00000461708 LMOD3Q0VAK6 560 aa23.52■■□□□ 1.36
SSB-206ENST00000461708 CRY2Q49AN0 593 aa23.52■■□□□ 1.36
SSB-206ENST00000461708 RRP7AQ9Y3A4 280 aaKnown RBP23.52■■□□□ 1.36
SSB-206ENST00000461708 RIPK4P57078 832 aa23.51■■□□□ 1.35
SSB-206ENST00000461708 IFFO2Q5TF58 517 aa23.51■■□□□ 1.35
SSB-206ENST00000461708 RTKN2Q8IZC4 609 aa23.51■■□□□ 1.35
SSB-206ENST00000461708 KLRG1Q96E93 195 aa23.51■■□□□ 1.35
SSB-206ENST00000461708 TSPYL4Q9UJ04 414 aa23.51■■□□□ 1.35
SSB-206ENST00000461708 TTLL7Q6ZT98 887 aa23.5■■□□□ 1.35
SSB-206ENST00000461708 FAM177BA6PVY3 158 aa23.49■■□□□ 1.35
SSB-206ENST00000461708 TMPOP42166 694 aaKnown RBP23.49■■□□□ 1.35
SSB-206ENST00000461708 FKBP4Q02790 459 aaKnown RBP eCLIP23.49■■□□□ 1.35
SSB-206ENST00000461708 NGEFQ8N5V2 710 aa23.49■■□□□ 1.35
SSB-206ENST00000461708 JMYQ8N9B5 988 aa23.49■■□□□ 1.35
SSB-206ENST00000461708 MYBBP1AQ9BQG0 1328 aaKnown RBP23.49■■□□□ 1.35
SSB-206ENST00000461708 MYL6BP14649 208 aa23.48■■□□□ 1.35
SSB-206ENST00000461708 GIGYF2Q6Y7W6 1299 aaKnown RBP23.48■■□□□ 1.35
SSB-206ENST00000461708 HOXA10P31260 410 aaPredicted RBP23.47■■□□□ 1.35
SSB-206ENST00000461708 LRP10Q7Z4F1 713 aa23.47■■□□□ 1.35
SSB-206ENST00000461708 ZNF34Q8IZ26 560 aa23.47■■□□□ 1.35
SSB-206ENST00000461708 DDX10Q13206 875 aaKnown RBP23.46■■□□□ 1.35
SSB-206ENST00000461708 CC2D2BQ6DHV5 1058 aa23.46■■□□□ 1.35
SSB-206ENST00000461708 ABCC12Q96J65 1359 aa23.46■■□□□ 1.35
SSB-206ENST00000461708 L3MBTL3Q96JM7 780 aaPredicted RBP23.46■■□□□ 1.35
SSB-206ENST00000461708 UBN2Q6ZU65 1347 aa23.45■■□□□ 1.34
SSB-206ENST00000461708 HTRA3P83110 453 aa23.45■■□□□ 1.34
SSB-206ENST00000461708 PDIA6Q15084 440 aa23.45■■□□□ 1.34
SSB-206ENST00000461708 ZBTB3Q9H5J0 574 aa23.45■■□□□ 1.34
SSB-206ENST00000461708 SCN4AP35499 1836 aa23.45■■□□□ 1.34
SSB-206ENST00000461708 SNED1Q8TER0 1413 aa23.44■■□□□ 1.34
SSB-206ENST00000461708 IQCA1LA6NCM1 817 aa23.44■■□□□ 1.34
SSB-206ENST00000461708 DDNO94850 711 aaPredicted RBP23.44■■□□□ 1.34
SSB-206ENST00000461708 GRIPAP1Q4V328 841 aa23.44■■□□□ 1.34
SSB-206ENST00000461708 PARP10Q53GL7 1025 aa23.44■■□□□ 1.34
SSB-206ENST00000461708 NUTM1Q86Y26 1132 aa23.44■■□□□ 1.34
SSB-206ENST00000461708 PCNTO95613 3336 aa23.44■■□□□ 1.34
SSB-206ENST00000461708 GPTP24298 496 aa23.43■■□□□ 1.34
SSB-206ENST00000461708 SUSD4Q5VX71 490 aa23.43■■□□□ 1.34
SSB-206ENST00000461708 PSMD1Q99460 953 aa23.43■■□□□ 1.34
SSB-206ENST00000461708 NTSR2O95665 410 aa23.42■■□□□ 1.34
SSB-206ENST00000461708 CHADLQ6NUI6 762 aa23.42■■□□□ 1.34
SSB-206ENST00000461708 PPP1R42Q7Z4L9 355 aa23.42■■□□□ 1.34
SSB-206ENST00000461708 RPGRQ92834 1020 aaKnown RBP23.42■■□□□ 1.34
SSB-206ENST00000461708 ZNF277Q9NRM2 450 aaPredicted RBP23.42■■□□□ 1.34
SSB-206ENST00000461708 CHL1O00533 1208 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms