RNA–Protein interactions for RNA: ENST00000461624.1

SPTA1-202, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 2

Gene SPTA1, Length 930 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-202ENST00000461624 TBX22Q9Y458 520 aa8.59□□□□□ -1.03
SPTA1-202ENST00000461624 EMILIN1Q9Y6C2 1016 aa8.59□□□□□ -1.03
SPTA1-202ENST00000461624 PTCH1Q13635 1447 aa8.59□□□□□ -1.03
SPTA1-202ENST00000461624 PTPRUQ92729 1446 aa8.59□□□□□ -1.03
SPTA1-202ENST00000461624 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.59□□□□□ -1.03
SPTA1-202ENST00000461624 GLI3P10071 1580 aa8.58□□□□□ -1.04
SPTA1-202ENST00000461624 ERBINQ96RT1 1412 aa8.58□□□□□ -1.04
SPTA1-202ENST00000461624 GMPRP36959 345 aa8.58□□□□□ -1.04
SPTA1-202ENST00000461624 ERFEQ4G0M1 354 aa8.58□□□□□ -1.04
SPTA1-202ENST00000461624 DEFB132Q7Z7B7 95 aa8.58□□□□□ -1.04
SPTA1-202ENST00000461624 CCDC116Q8IYX3 515 aa8.58□□□□□ -1.04
SPTA1-202ENST00000461624 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.58□□□□□ -1.04
SPTA1-202ENST00000461624 FKBPLQ9UIM3 349 aa8.58□□□□□ -1.04
SPTA1-202ENST00000461624 USP21Q9UK80 565 aa8.58□□□□□ -1.04
SPTA1-202ENST00000461624 CDV3Q9UKY7 258 aaKnown RBP8.58□□□□□ -1.04
SPTA1-202ENST00000461624 GCC2Q8IWJ2 1684 aa8.58□□□□□ -1.04
SPTA1-202ENST00000461624 MARF1Q9Y4F3 1742 aaKnown RBP8.57□□□□□ -1.04
SPTA1-202ENST00000461624 RIMS2Q9UQ26 1411 aa8.57□□□□□ -1.04
SPTA1-202ENST00000461624 TSPY4P0CV99 314 aa8.57□□□□□ -1.04
SPTA1-202ENST00000461624 TSPY10P0CW01 314 aa8.57□□□□□ -1.04
SPTA1-202ENST00000461624 DDX17Q92841 729 aaKnown RBP8.57□□□□□ -1.04
SPTA1-202ENST00000461624 CARD14Q9BXL6 1004 aa8.57□□□□□ -1.04
SPTA1-202ENST00000461624 MYOM2P54296 1465 aa8.57□□□□□ -1.04
SPTA1-202ENST00000461624 FAM181BA6NEQ2 426 aa8.56□□□□□ -1.04
SPTA1-202ENST00000461624 MAN1A2O60476 641 aa8.56□□□□□ -1.04
SPTA1-202ENST00000461624 ADAMTS2O95450 1211 aa8.56□□□□□ -1.04
SPTA1-202ENST00000461624 VSIG8P0DPA2 414 aa8.56□□□□□ -1.04
SPTA1-202ENST00000461624 VEGFBP49765 207 aa8.56□□□□□ -1.04
SPTA1-202ENST00000461624 C6orf118Q5T5N4 469 aa8.56□□□□□ -1.04
SPTA1-202ENST00000461624 ARHGAP9Q9BRR9 750 aa8.56□□□□□ -1.04
SPTA1-202ENST00000461624 CROCC2H7BZ55 1655 aa8.56□□□□□ -1.04
SPTA1-202ENST00000461624 NALCNQ8IZF0 1738 aa8.55□□□□□ -1.04
SPTA1-202ENST00000461624 BMP2P12643 396 aa8.55□□□□□ -1.04
SPTA1-202ENST00000461624 C14orf37Q86TY3 774 aa8.55□□□□□ -1.04
SPTA1-202ENST00000461624 LRRN4Q8WUT4 740 aa8.55□□□□□ -1.04
SPTA1-202ENST00000461624 FAM117AQ9C073 453 aa8.55□□□□□ -1.04
SPTA1-202ENST00000461624 ERBB4Q15303 1308 aa8.54□□□□□ -1.04
SPTA1-202ENST00000461624 NRXN3Q9Y4C0 1643 aa8.54□□□□□ -1.04
SPTA1-202ENST00000461624 KIF15Q9NS87 1388 aa8.54□□□□□ -1.04
SPTA1-202ENST00000461624 SOBPA7XYQ1 873 aa8.54□□□□□ -1.04
SPTA1-202ENST00000461624 YY1P25490 414 aa8.54□□□□□ -1.04
SPTA1-202ENST00000461624 SLC10A4Q96EP9 437 aa8.54□□□□□ -1.04
SPTA1-202ENST00000461624 TSEN34Q9BSV6 310 aaKnown RBP8.54□□□□□ -1.04
SPTA1-202ENST00000461624 SLC52A1Q9NWF4 448 aa8.54□□□□□ -1.04
SPTA1-202ENST00000461624 PGPEP1Q9NXJ5 209 aa8.54□□□□□ -1.04
SPTA1-202ENST00000461624 GPSM3Q9Y4H4 160 aa8.54□□□□□ -1.04
SPTA1-202ENST00000461624 ADGRL3Q9HAR2 1447 aa8.54□□□□□ -1.04
SPTA1-202ENST00000461624 SOS2Q07890 1332 aaPredicted RBP8.54□□□□□ -1.04
SPTA1-202ENST00000461624 RALGAPBQ86X10 1494 aa8.53□□□□□ -1.04
SPTA1-202ENST00000461624 ZSCAN1Q8NBB4 408 aa8.53□□□□□ -1.04
SPTA1-202ENST00000461624 PROCA1Q8NCQ7 364 aaPredicted RBP8.53□□□□□ -1.04
SPTA1-202ENST00000461624 PNMA1Q8ND90 353 aa8.53□□□□□ -1.04
SPTA1-202ENST00000461624 RPRD2Q5VT52 1461 aaKnown RBP8.52□□□□□ -1.05
SPTA1-202ENST00000461624 PTK2Q05397 1052 aa8.52□□□□□ -1.05
SPTA1-202ENST00000461624 DHX9Q08211 1270 aaKnown RBP8.52□□□□□ -1.05
SPTA1-202ENST00000461624 NR6A1Q15406 480 aa8.52□□□□□ -1.05
SPTA1-202ENST00000461624 ZBTB33Q86T24 672 aa8.52□□□□□ -1.05
SPTA1-202ENST00000461624 GJD4Q96KN9 370 aaPredicted RBP8.52□□□□□ -1.05
SPTA1-202ENST00000461624 C1orf167Q5SNV9 1468 aa8.51□□□□□ -1.05
SPTA1-202ENST00000461624 SLIT2O94813 1529 aa8.51□□□□□ -1.05
SPTA1-202ENST00000461624 PPP1R26Q5T8A7 1209 aaPredicted RBP8.51□□□□□ -1.05
SPTA1-202ENST00000461624 KCTD15Q96SI1 283 aaPredicted RBP8.51□□□□□ -1.05
SPTA1-202ENST00000461624 AP1G2O75843 785 aa8.5□□□□□ -1.05
SPTA1-202ENST00000461624 LORP23490 312 aaPredicted RBP8.5□□□□□ -1.05
SPTA1-202ENST00000461624 Q6ZVU0 165 aa8.5□□□□□ -1.05
SPTA1-202ENST00000461624 AMOTL2Q9Y2J4 779 aa8.5□□□□□ -1.05
SPTA1-202ENST00000461624 KANK1Q14678 1352 aa8.49□□□□□ -1.05
SPTA1-202ENST00000461624 MYOM3Q5VTT5 1437 aa8.49□□□□□ -1.05
SPTA1-202ENST00000461624 IL27Q8NEV9 243 aa8.49□□□□□ -1.05
SPTA1-202ENST00000461624 DNMT3LQ9UJW3 386 aa8.49□□□□□ -1.05
SPTA1-202ENST00000461624 PTPN23Q9H3S7 1636 aa8.49□□□□□ -1.05
SPTA1-202ENST00000461624 TNS1Q9HBL0 1735 aaKnown RBP8.49□□□□□ -1.05
SPTA1-202ENST00000461624 DISP2A7MBM2 1401 aa8.48□□□□□ -1.05
SPTA1-202ENST00000461624 ABCC5O15440 1437 aa8.48□□□□□ -1.05
SPTA1-202ENST00000461624 TTLL8A6PVC2 850 aa8.48□□□□□ -1.05
SPTA1-202ENST00000461624 PPFIA3O75145 1194 aa8.48□□□□□ -1.05
SPTA1-202ENST00000461624 PPP1R15AO75807 674 aaPredicted RBP8.48□□□□□ -1.05
SPTA1-202ENST00000461624 USP17L8P0C7I0 530 aa8.48□□□□□ -1.05
SPTA1-202ENST00000461624 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.48□□□□□ -1.05
SPTA1-202ENST00000461624 NBPF20Q3BBV1 942 aa8.48□□□□□ -1.05
SPTA1-202ENST00000461624 OCSTAMPQ9BR26 566 aa8.48□□□□□ -1.05
SPTA1-202ENST00000461624 GOPCQ9HD26 462 aa8.48□□□□□ -1.05
SPTA1-202ENST00000461624 PXDNQ92626 1479 aa8.48□□□□□ -1.05
SPTA1-202ENST00000461624 SPINT1O43278 529 aa8.47□□□□□ -1.05
SPTA1-202ENST00000461624 INTS6LQ5JSJ4 861 aaKnown RBP8.47□□□□□ -1.05
SPTA1-202ENST00000461624 GOLGB1Q14789 3259 aaKnown RBP8.46□□□□□ -1.05
SPTA1-202ENST00000461624 RGPD1P0DJD0 1748 aa8.46□□□□□ -1.05
SPTA1-202ENST00000461624 LOC100996750A0A140TA64 210 aa8.46□□□□□ -1.06
SPTA1-202ENST00000461624 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.46□□□□□ -1.06
SPTA1-202ENST00000461624 ADAM32Q8TC27 787 aa8.46□□□□□ -1.06
SPTA1-202ENST00000461624 KRTAP4-6Q9BYQ5 205 aa8.46□□□□□ -1.06
SPTA1-202ENST00000461624 IQGAP3Q86VI3 1631 aa8.45□□□□□ -1.06
SPTA1-202ENST00000461624 RFC5P40937 340 aa8.45□□□□□ -1.06
SPTA1-202ENST00000461624 CBLBQ13191 982 aa8.45□□□□□ -1.06
SPTA1-202ENST00000461624 R3HDM1Q15032 1099 aaKnown RBP8.45□□□□□ -1.06
SPTA1-202ENST00000461624 HMX1Q9NP08 348 aaPredicted RBP8.45□□□□□ -1.06
SPTA1-202ENST00000461624 CAMTA1Q9Y6Y1 1673 aa8.45□□□□□ -1.06
SPTA1-202ENST00000461624 METP08581 1390 aa8.45□□□□□ -1.06
SPTA1-202ENST00000461624 USP32Q8NFA0 1604 aa8.44□□□□□ -1.06
SPTA1-202ENST00000461624 SF3B2Q13435 895 aaKnown RBP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 1283.6 ms