RNA–Protein interactions for RNA: ENST00000460211.5

ATG4B-213, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 871 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-213ENST00000460211 NBPF10Q6P3W6 841 aaKnown RBP19.44■□□□□ 0.7
ATG4B-213ENST00000460211 NBPF15Q8N660 670 aa19.44■□□□□ 0.7
ATG4B-213ENST00000460211 RRAGCQ9HB90 399 aa19.44■□□□□ 0.7
ATG4B-213ENST00000460211 ERBB4Q15303 1308 aa19.44■□□□□ 0.7
ATG4B-213ENST00000460211 KDM3BQ7LBC6 1761 aa19.44■□□□□ 0.7
ATG4B-213ENST00000460211 CAMTA2O94983 1202 aa19.43■□□□□ 0.7
ATG4B-213ENST00000460211 EIF2S2P20042 333 aaKnown RBP19.43■□□□□ 0.7
ATG4B-213ENST00000460211 CLEC4GQ6UXB4 293 aa19.43■□□□□ 0.7
ATG4B-213ENST00000460211 BICDL1Q6ZP65 573 aa19.43■□□□□ 0.7
ATG4B-213ENST00000460211 FAM9BQ8IZU0 186 aa19.43■□□□□ 0.7
ATG4B-213ENST00000460211 IFT57Q9NWB7 429 aa19.43■□□□□ 0.7
ATG4B-213ENST00000460211 KDM2BQ8NHM5 1336 aa19.43■□□□□ 0.7
ATG4B-213ENST00000460211 SBF1O95248 1867 aa19.43■□□□□ 0.7
ATG4B-213ENST00000460211 RGL2O15211 777 aa19.42■□□□□ 0.7
ATG4B-213ENST00000460211 SERPINB2P05120 415 aa19.42■□□□□ 0.7
ATG4B-213ENST00000460211 CCDC27Q2M243 656 aa19.42■□□□□ 0.7
ATG4B-213ENST00000460211 NCBP3Q53F19 620 aaKnown RBP19.42■□□□□ 0.7
ATG4B-213ENST00000460211 NGEFQ8N5V2 710 aa19.42■□□□□ 0.7
ATG4B-213ENST00000460211 SETDB2Q96T68 719 aa19.42■□□□□ 0.7
ATG4B-213ENST00000460211 MYL6BP14649 208 aa19.41■□□□□ 0.7
ATG4B-213ENST00000460211 RASSF7Q02833 373 aa19.41■□□□□ 0.7
ATG4B-213ENST00000460211 TBC1D9BQ66K14 1250 aa19.41■□□□□ 0.7
ATG4B-213ENST00000460211 TNRC6CQ9HCJ0 1690 aaKnown RBP19.4■□□□□ 0.7
ATG4B-213ENST00000460211 NPHP1O15259 732 aa19.4■□□□□ 0.7
ATG4B-213ENST00000460211 HOXB7P09629 217 aa19.4■□□□□ 0.7
ATG4B-213ENST00000460211 ZNF853P0CG23 659 aa19.4■□□□□ 0.7
ATG4B-213ENST00000460211 FSTL1Q12841 308 aa19.4■□□□□ 0.7
ATG4B-213ENST00000460211 KIF6Q6ZMV9 814 aa19.4■□□□□ 0.7
ATG4B-213ENST00000460211 KLRG1Q96E93 195 aa19.4■□□□□ 0.7
ATG4B-213ENST00000460211 MBIPQ9NS73 344 aa19.4■□□□□ 0.7
ATG4B-213ENST00000460211 AFDNP55196 1824 aaKnown RBP19.39■□□□□ 0.7
ATG4B-213ENST00000460211 WWC1Q8IX03 1113 aa19.38■□□□□ 0.69
ATG4B-213ENST00000460211 CARMIL3Q8ND23 1372 aa19.38■□□□□ 0.69
ATG4B-213ENST00000460211 CHMP4AQ9BY43 222 aa19.38■□□□□ 0.69
ATG4B-213ENST00000460211 ERVV-1B6SEH8 477 aa19.37■□□□□ 0.69
ATG4B-213ENST00000460211 KRT24Q2M2I5 525 aa19.36■□□□□ 0.69
ATG4B-213ENST00000460211 HDGFL1Q5TGJ6 251 aa19.36■□□□□ 0.69
ATG4B-213ENST00000460211 DUSP27Q5VZP5 1158 aa19.36■□□□□ 0.69
ATG4B-213ENST00000460211 NECTIN2Q92692 538 aa19.36■□□□□ 0.69
ATG4B-213ENST00000460211 LAMB4A4D0S4 1761 aa19.36■□□□□ 0.69
ATG4B-213ENST00000460211 MAP3K15Q6ZN16 1313 aa19.35■□□□□ 0.69
ATG4B-213ENST00000460211 COL13A1Q5TAT6 717 aaPredicted RBP19.35■□□□□ 0.69
ATG4B-213ENST00000460211 CNBD1Q8NA66 436 aa19.35■□□□□ 0.69
ATG4B-213ENST00000460211 DDX21Q9NR30 783 aaKnown RBP eCLIP19.35■□□□□ 0.69
ATG4B-213ENST00000460211 NIP7Q9Y221 180 aaKnown RBP eCLIP19.35■□□□□ 0.69
ATG4B-213ENST00000460211 ST5P78524 1137 aa19.34■□□□□ 0.69
ATG4B-213ENST00000460211 NBPF5PQ86XG9 351 aaPredicted RBP19.34■□□□□ 0.69
ATG4B-213ENST00000460211 JMYQ8N9B5 988 aa19.34■□□□□ 0.69
ATG4B-213ENST00000460211 SMC1BQ8NDV3 1235 aa19.34■□□□□ 0.69
ATG4B-213ENST00000460211 PDZRN3Q9UPQ7 1066 aa19.34■□□□□ 0.69
ATG4B-213ENST00000460211 SALL2Q9Y467 1007 aaPredicted RBP19.34■□□□□ 0.69
ATG4B-213ENST00000460211 CCDC88AQ3V6T2 1871 aa19.34■□□□□ 0.69
ATG4B-213ENST00000460211 IL16Q14005 1332 aa19.33■□□□□ 0.69
ATG4B-213ENST00000460211 CCER2I3L3R5 266 aa19.33■□□□□ 0.68
ATG4B-213ENST00000460211 PRELPP51888 382 aa19.33■□□□□ 0.68
ATG4B-213ENST00000460211 PDIA6Q15084 440 aa19.33■□□□□ 0.68
ATG4B-213ENST00000460211 HLFQ16534 295 aa19.33■□□□□ 0.68
ATG4B-213ENST00000460211 TPTE2Q6XPS3 522 aa19.33■□□□□ 0.68
ATG4B-213ENST00000460211 TTLL7Q6ZT98 887 aa19.33■□□□□ 0.68
ATG4B-213ENST00000460211 WDR63Q8IWG1 891 aa19.33■□□□□ 0.68
ATG4B-213ENST00000460211 BRIP1Q9BX63 1249 aa19.33■□□□□ 0.68
ATG4B-213ENST00000460211 DBF4Q9UBU7 674 aaPredicted RBP19.33■□□□□ 0.68
ATG4B-213ENST00000460211 DLEC1Q9Y238 1755 aa19.33■□□□□ 0.68
ATG4B-213ENST00000460211 NRXN2Q9P2S2 1712 aa19.33■□□□□ 0.68
ATG4B-213ENST00000460211 TIAM2Q8IVF5 1701 aa19.32■□□□□ 0.68
ATG4B-213ENST00000460211 H0YIN7 160 aa19.32■□□□□ 0.68
ATG4B-213ENST00000460211 CAPN15O75808 1086 aa19.32■□□□□ 0.68
ATG4B-213ENST00000460211 PDE6BP35913 854 aa19.32■□□□□ 0.68
ATG4B-213ENST00000460211 ZBTB3Q9H5J0 574 aa19.32■□□□□ 0.68
ATG4B-213ENST00000460211 SCN7AQ01118 1682 aa19.32■□□□□ 0.68
ATG4B-213ENST00000460211 ELL2O00472 640 aaPredicted RBP19.31■□□□□ 0.68
ATG4B-213ENST00000460211 ANXA1P04083 346 aa19.31■□□□□ 0.68
ATG4B-213ENST00000460211 LMNB1P20700 586 aa19.31■□□□□ 0.68
ATG4B-213ENST00000460211 GTF2E1P29083 439 aaPredicted RBP19.31■□□□□ 0.68
ATG4B-213ENST00000460211 PRR5LQ6MZQ0 368 aa19.31■□□□□ 0.68
ATG4B-213ENST00000460211 COPS6Q7L5N1 327 aa19.31■□□□□ 0.68
ATG4B-213ENST00000460211 C2CD5Q86YS7 1000 aa19.31■□□□□ 0.68
ATG4B-213ENST00000460211 CHPF2Q9P2E5 772 aa19.31■□□□□ 0.68
ATG4B-213ENST00000460211 AIMP1Q12904 312 aaKnown RBP19.3■□□□□ 0.68
ATG4B-213ENST00000460211 PROSER3Q2NL68 480 aa19.3■□□□□ 0.68
ATG4B-213ENST00000460211 GIGYF2Q6Y7W6 1299 aaKnown RBP19.3■□□□□ 0.68
ATG4B-213ENST00000460211 TTLL6Q8N841 843 aa19.3■□□□□ 0.68
ATG4B-213ENST00000460211 XAGE3Q8WTP9 111 aa19.3■□□□□ 0.68
ATG4B-213ENST00000460211 NYXQ9GZU5 481 aa19.3■□□□□ 0.68
ATG4B-213ENST00000460211 HYPKQ9NX55 129 aa19.3■□□□□ 0.68
ATG4B-213ENST00000460211 PCNTO95613 3336 aa19.3■□□□□ 0.68
ATG4B-213ENST00000460211 GLTPD2A6NH11 291 aa19.29■□□□□ 0.68
ATG4B-213ENST00000460211 LRP10Q7Z4F1 713 aa19.29■□□□□ 0.68
ATG4B-213ENST00000460211 FAM177BA6PVY3 158 aa19.28■□□□□ 0.68
ATG4B-213ENST00000460211 VEGFAP15692 232 aaPredicted RBP19.28■□□□□ 0.68
ATG4B-213ENST00000460211 HSP90AB3PQ58FF7 597 aa19.28■□□□□ 0.68
ATG4B-213ENST00000460211 CCDC30Q5VVM6 783 aa19.28■□□□□ 0.68
ATG4B-213ENST00000460211 DIEXFQ68CQ4 756 aaKnown RBP19.28■□□□□ 0.68
ATG4B-213ENST00000460211 C8orf58Q8NAV2 365 aa19.28■□□□□ 0.68
ATG4B-213ENST00000460211 TSR2Q969E8 191 aaKnown RBP19.28■□□□□ 0.68
ATG4B-213ENST00000460211 ZNF219Q9P2Y4 722 aaPredicted RBP19.28■□□□□ 0.68
ATG4B-213ENST00000460211 ZC3H4Q9UPT8 1303 aaKnown RBP19.27■□□□□ 0.68
ATG4B-213ENST00000460211 BCORQ6W2J9 1755 aa19.27■□□□□ 0.68
ATG4B-213ENST00000460211 CCDC24Q8N4L8 307 aa19.27■□□□□ 0.68
ATG4B-213ENST00000460211 NFKBIEO00221 500 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms