RNA–Protein interactions for RNA: ENST00000458511.6

TRAPPC2-204, Transcript of trafficking protein particle complex 2, humanhuman

TSL 5 BASIC

Gene TRAPPC2, Length 678 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2-204ENST00000458511 SOX11P35716 441 aa7.36□□□□□ -1.23
TRAPPC2-204ENST00000458511 VEGFBP49765 207 aa7.36□□□□□ -1.23
TRAPPC2-204ENST00000458511 GUCA2AQ02747 115 aa7.36□□□□□ -1.23
TRAPPC2-204ENST00000458511 DDX10Q13206 875 aaKnown RBP7.36□□□□□ -1.23
TRAPPC2-204ENST00000458511 RC3H1Q5TC82 1133 aaKnown RBP7.36□□□□□ -1.23
TRAPPC2-204ENST00000458511 FAM177A1Q8N128 213 aaPredicted RBP7.36□□□□□ -1.23
TRAPPC2-204ENST00000458511 CCDC24Q8N4L8 307 aa7.36□□□□□ -1.23
TRAPPC2-204ENST00000458511 TSC1Q92574 1164 aa7.36□□□□□ -1.23
TRAPPC2-204ENST00000458511 C3P01024 1663 aa7.35□□□□□ -1.23
TRAPPC2-204ENST00000458511 CCER2I3L3R5 266 aa7.35□□□□□ -1.23
TRAPPC2-204ENST00000458511 KDM4AO75164 1064 aa7.35□□□□□ -1.23
TRAPPC2-204ENST00000458511 FDX1P10109 184 aa7.35□□□□□ -1.23
TRAPPC2-204ENST00000458511 SEMA3FQ13275 785 aa7.35□□□□□ -1.23
TRAPPC2-204ENST00000458511 ZNF326Q5BKZ1 582 aaKnown RBP7.35□□□□□ -1.23
TRAPPC2-204ENST00000458511 SYMPKQ92797 1274 aaKnown RBP7.35□□□□□ -1.23
TRAPPC2-204ENST00000458511 SCAF11Q99590 1463 aaKnown RBP7.35□□□□□ -1.23
TRAPPC2-204ENST00000458511 UBR1Q8IWV7 1749 aa7.35□□□□□ -1.23
TRAPPC2-204ENST00000458511 ARHGEF28Q8N1W1 1705 aaKnown RBP7.35□□□□□ -1.23
TRAPPC2-204ENST00000458511 KIF7Q2M1P5 1343 aa7.34□□□□□ -1.23
TRAPPC2-204ENST00000458511 HOXA2O43364 376 aa7.34□□□□□ -1.23
TRAPPC2-204ENST00000458511 ATP9BO43861 1147 aa7.34□□□□□ -1.23
TRAPPC2-204ENST00000458511 BMP1P13497 986 aa7.34□□□□□ -1.23
TRAPPC2-204ENST00000458511 INSM1Q01101 510 aaPredicted RBP7.34□□□□□ -1.23
TRAPPC2-204ENST00000458511 NOM1Q5C9Z4 860 aaKnown RBP7.34□□□□□ -1.23
TRAPPC2-204ENST00000458511 PHLDB3Q6NSJ2 640 aa7.34□□□□□ -1.23
TRAPPC2-204ENST00000458511 HELBQ8NG08 1087 aaPredicted RBP7.34□□□□□ -1.23
TRAPPC2-204ENST00000458511 USB1Q9BQ65 265 aaKnown RBP7.34□□□□□ -1.23
TRAPPC2-204ENST00000458511 HIRIP3Q9BW71 556 aaPredicted RBP7.34□□□□□ -1.23
TRAPPC2-204ENST00000458511 PCDHGC3Q9UN70 934 aa7.34□□□□□ -1.23
TRAPPC2-204ENST00000458511 SETD1AO15047 1707 aaKnown RBP7.34□□□□□ -1.23
TRAPPC2-204ENST00000458511 QRICH2Q9H0J4 1663 aa7.34□□□□□ -1.23
TRAPPC2-204ENST00000458511 PIK3C2GO75747 1445 aa7.34□□□□□ -1.23
TRAPPC2-204ENST00000458511 EIF3AQ14152 1382 aaKnown RBP7.33□□□□□ -1.24
TRAPPC2-204ENST00000458511 ANP32CO43423 234 aa7.33□□□□□ -1.24
TRAPPC2-204ENST00000458511 ZNF16P17020 682 aaPredicted RBP7.33□□□□□ -1.24
TRAPPC2-204ENST00000458511 PTCRAQ6ISU1 281 aaPredicted RBP7.33□□□□□ -1.24
TRAPPC2-204ENST00000458511 ADGRB1O14514 1584 aa7.33□□□□□ -1.24
TRAPPC2-204ENST00000458511 ST20-MTHFSA0A0A6YYL1 179 aa7.32□□□□□ -1.24
TRAPPC2-204ENST00000458511 ALDH1A1P00352 501 aa7.32□□□□□ -1.24
TRAPPC2-204ENST00000458511 GMPRP36959 345 aa7.32□□□□□ -1.24
TRAPPC2-204ENST00000458511 ELOAQ14241 798 aaKnown RBP7.32□□□□□ -1.24
TRAPPC2-204ENST00000458511 NBPF1Q3BBV0 1214 aa7.32□□□□□ -1.24
TRAPPC2-204ENST00000458511 TRIM46Q7Z4K8 759 aa7.32□□□□□ -1.24
TRAPPC2-204ENST00000458511 BCL2L13Q9BXK5 485 aa7.32□□□□□ -1.24
TRAPPC2-204ENST00000458511 SENP2Q9HC62 589 aa7.32□□□□□ -1.24
TRAPPC2-204ENST00000458511 NOVA2Q9UNW9 492 aaKnown RBP7.32□□□□□ -1.24
TRAPPC2-204ENST00000458511 KNDC1Q76NI1 1749 aa7.32□□□□□ -1.24
TRAPPC2-204ENST00000458511 SBNO2Q9Y2G9 1366 aa7.32□□□□□ -1.24
TRAPPC2-204ENST00000458511 MYOM1P52179 1685 aa7.32□□□□□ -1.24
TRAPPC2-204ENST00000458511 RIMS1Q86UR5 1692 aaKnown RBP7.32□□□□□ -1.24
TRAPPC2-204ENST00000458511 CFAP99D6REC4 459 aa7.31□□□□□ -1.24
TRAPPC2-204ENST00000458511 ERCC3P19447 782 aa7.31□□□□□ -1.24
TRAPPC2-204ENST00000458511 IDI1Q13907 227 aa7.31□□□□□ -1.24
TRAPPC2-204ENST00000458511 Q3C1V9 767 aa7.31□□□□□ -1.24
TRAPPC2-204ENST00000458511 GIPC2Q8TF65 315 aa7.31□□□□□ -1.24
TRAPPC2-204ENST00000458511 C14orf93Q9H972 538 aaKnown RBP7.31□□□□□ -1.24
TRAPPC2-204ENST00000458511 ZMYM3Q14202 1370 aa7.31□□□□□ -1.24
TRAPPC2-204ENST00000458511 KTN1Q86UP2 1357 aaKnown RBP7.31□□□□□ -1.24
TRAPPC2-204ENST00000458511 PIK3CDO00329 1044 aa7.3□□□□□ -1.24
TRAPPC2-204ENST00000458511 SIAH2O43255 324 aa7.3□□□□□ -1.24
TRAPPC2-204ENST00000458511 CENPBP07199 599 aaPredicted RBP7.3□□□□□ -1.24
TRAPPC2-204ENST00000458511 TCF3P15923 654 aa7.3□□□□□ -1.24
TRAPPC2-204ENST00000458511 USP46P62068 366 aa7.3□□□□□ -1.24
TRAPPC2-204ENST00000458511 MTMR2Q13614 643 aa7.3□□□□□ -1.24
TRAPPC2-204ENST00000458511 GRIPAP1Q4V328 841 aa7.3□□□□□ -1.24
TRAPPC2-204ENST00000458511 TESK2Q96S53 571 aa7.3□□□□□ -1.24
TRAPPC2-204ENST00000458511 ESF1Q9H501 851 aaKnown RBP7.3□□□□□ -1.24
TRAPPC2-204ENST00000458511 SLAIN2Q9P270 581 aa7.3□□□□□ -1.24
TRAPPC2-204ENST00000458511 A2ML1A8K2U0 1454 aa7.3□□□□□ -1.24
TRAPPC2-204ENST00000458511 NLRP1Q9C000 1473 aa7.3□□□□□ -1.24
TRAPPC2-204ENST00000458511 ERBB4Q15303 1308 aa7.29□□□□□ -1.24
TRAPPC2-204ENST00000458511 ADGRF5Q8IZF2 1346 aa7.29□□□□□ -1.24
TRAPPC2-204ENST00000458511 SOWAHDA6NJG2 315 aa7.29□□□□□ -1.24
TRAPPC2-204ENST00000458511 SERPINB4P48594 390 aa7.29□□□□□ -1.24
TRAPPC2-204ENST00000458511 TMF1P82094 1093 aa7.29□□□□□ -1.24
TRAPPC2-204ENST00000458511 NR6A1Q15406 480 aa7.29□□□□□ -1.24
TRAPPC2-204ENST00000458511 ALKQ9UM73 1620 aa7.28□□□□□ -1.24
TRAPPC2-204ENST00000458511 NRXN3Q9Y4C0 1643 aa7.28□□□□□ -1.24
TRAPPC2-204ENST00000458511 SSFA2P28290 1259 aa7.28□□□□□ -1.24
TRAPPC2-204ENST00000458511 ARID4AP29374 1257 aaPredicted RBP7.28□□□□□ -1.24
TRAPPC2-204ENST00000458511 SIRT1Q96EB6 747 aa7.28□□□□□ -1.24
TRAPPC2-204ENST00000458511 ZNF142P52746 1687 aaPredicted RBP7.28□□□□□ -1.24
TRAPPC2-204ENST00000458511 DLC1Q96QB1 1528 aa7.27□□□□□ -1.25
TRAPPC2-204ENST00000458511 USP17L3A6NCW0 530 aa7.27□□□□□ -1.25
TRAPPC2-204ENST00000458511 USP17L4A6NCW7 530 aa7.27□□□□□ -1.25
TRAPPC2-204ENST00000458511 USP17L2Q6R6M4 530 aa7.27□□□□□ -1.25
TRAPPC2-204ENST00000458511 USP17L1Q7RTZ2 530 aa7.27□□□□□ -1.25
TRAPPC2-204ENST00000458511 KIFC2Q96AC6 838 aa7.27□□□□□ -1.25
TRAPPC2-204ENST00000458511 PTPRMP28827 1452 aa7.27□□□□□ -1.25
TRAPPC2-204ENST00000458511 TNRQ92752 1358 aa7.26□□□□□ -1.25
TRAPPC2-204ENST00000458511 MARSP56192 900 aaKnown RBP7.26□□□□□ -1.25
TRAPPC2-204ENST00000458511 WNT7BP56706 349 aa7.26□□□□□ -1.25
TRAPPC2-204ENST00000458511 CCDC125Q86Z20 511 aa7.26□□□□□ -1.25
TRAPPC2-204ENST00000458511 NPAS4Q8IUM7 802 aa7.26□□□□□ -1.25
TRAPPC2-204ENST00000458511 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.26□□□□□ -1.25
TRAPPC2-204ENST00000458511 PRKRIP1Q9H875 184 aaPredicted RBP7.26□□□□□ -1.25
TRAPPC2-204ENST00000458511 NXF1Q9UBU9 619 aaKnown RBP7.26□□□□□ -1.25
TRAPPC2-204ENST00000458511 USP32Q8NFA0 1604 aa7.26□□□□□ -1.25
TRAPPC2-204ENST00000458511 ASXL1Q8IXJ9 1541 aa7.26□□□□□ -1.25
TRAPPC2-204ENST00000458511 DISP3Q9P2K9 1392 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms