RNA–Protein interactions for RNA: ENST00000455383.5

MSH6-206, Transcript of mutS homolog 6, humanhuman

TSL 5

Gene MSH6, Length 578 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-206ENST00000455383 SLX4Q8IY92 1834 aa25.07■■□□□ 1.6
MSH6-206ENST00000455383 ST5P78524 1137 aa25.06■■□□□ 1.6
MSH6-206ENST00000455383 CLEC4GQ6UXB4 293 aa25.06■■□□□ 1.6
MSH6-206ENST00000455383 NPM2Q86SE8 214 aaKnown RBP25.06■■□□□ 1.6
MSH6-206ENST00000455383 MASTLQ96GX5 879 aa25.06■■□□□ 1.6
MSH6-206ENST00000455383 ARFGEF2Q9Y6D5 1785 aa25.05■■□□□ 1.6
MSH6-206ENST00000455383 CNGB1Q14028 1251 aaPredicted RBP25.05■■□□□ 1.6
MSH6-206ENST00000455383 PRPF40BQ6NWY9 871 aaKnown RBP25.05■■□□□ 1.6
MSH6-206ENST00000455383 SOGA3Q5TF21 947 aa25.04■■□□□ 1.6
MSH6-206ENST00000455383 CFAP53Q96M91 514 aa25.04■■□□□ 1.6
MSH6-206ENST00000455383 PRAMEF22A3QJZ6 481 aa25.03■■□□□ 1.6
MSH6-206ENST00000455383 RGL2O15211 777 aa25.03■■□□□ 1.6
MSH6-206ENST00000455383 C7orf43Q8WVR3 580 aa25.03■■□□□ 1.6
MSH6-206ENST00000455383 SNRPA1P09661 255 aaKnown RBP25.02■■□□□ 1.6
MSH6-206ENST00000455383 PIP4K2AP48426 406 aaPredicted RBP25.02■■□□□ 1.6
MSH6-206ENST00000455383 KLRG2A4D1S0 409 aaPredicted RBP25.01■■□□□ 1.59
MSH6-206ENST00000455383 DDNO94850 711 aaPredicted RBP25.01■■□□□ 1.59
MSH6-206ENST00000455383 NUDCQ9Y266 331 aa25.01■■□□□ 1.59
MSH6-206ENST00000455383 NPHP1O15259 732 aa25■■□□□ 1.59
MSH6-206ENST00000455383 CHADLQ6NUI6 762 aa25■■□□□ 1.59
MSH6-206ENST00000455383 NBPF26B4DH59 902 aa24.99■■□□□ 1.59
MSH6-206ENST00000455383 HSPA1AP0DMV8 641 aaKnown RBP24.99■■□□□ 1.59
MSH6-206ENST00000455383 HSPA1BP0DMV9 641 aaKnown RBP24.99■■□□□ 1.59
MSH6-206ENST00000455383 CACNA1SQ13698 1873 aa24.99■■□□□ 1.59
MSH6-206ENST00000455383 NBPF10Q6P3W6 841 aaKnown RBP24.99■■□□□ 1.59
MSH6-206ENST00000455383 NBPF5PQ86XG9 351 aaPredicted RBP24.99■■□□□ 1.59
MSH6-206ENST00000455383 NBPF15Q8N660 670 aa24.99■■□□□ 1.59
MSH6-206ENST00000455383 ZNF652Q9Y2D9 606 aa24.99■■□□□ 1.59
MSH6-206ENST00000455383 HTATSF1O43719 755 aaKnown RBP24.98■■□□□ 1.59
MSH6-206ENST00000455383 MCM10Q7L590 875 aa24.98■■□□□ 1.59
MSH6-206ENST00000455383 POTEIP0CG38 1075 aa24.97■■□□□ 1.59
MSH6-206ENST00000455383 POTEJP0CG39 1038 aa24.97■■□□□ 1.59
MSH6-206ENST00000455383 TNS4Q8IZW8 715 aa24.97■■□□□ 1.59
MSH6-206ENST00000455383 RTF1Q92541 710 aaKnown RBP24.97■■□□□ 1.59
MSH6-206ENST00000455383 L3MBTL3Q96JM7 780 aaPredicted RBP24.97■■□□□ 1.59
MSH6-206ENST00000455383 CREBZFQ9NS37 354 aa24.97■■□□□ 1.59
MSH6-206ENST00000455383 U2AF1L5P0DN76 240 aaPredicted RBP24.96■■□□□ 1.59
MSH6-206ENST00000455383 NPR1P16066 1061 aa24.96■■□□□ 1.59
MSH6-206ENST00000455383 PPP2R1AP30153 589 aa24.96■■□□□ 1.59
MSH6-206ENST00000455383 U2AF1Q01081 240 aaKnown RBP eCLIP24.96■■□□□ 1.59
MSH6-206ENST00000455383 CCDC93Q567U6 631 aa24.96■■□□□ 1.59
MSH6-206ENST00000455383 TPTE2Q6XPS3 522 aa24.95■■□□□ 1.58
MSH6-206ENST00000455383 DCTN1Q14203 1278 aa24.94■■□□□ 1.58
MSH6-206ENST00000455383 IQCA1LA6NCM1 817 aa24.93■■□□□ 1.58
MSH6-206ENST00000455383 FKBP4Q02790 459 aaKnown RBP eCLIP24.93■■□□□ 1.58
MSH6-206ENST00000455383 NIP7Q9Y221 180 aaKnown RBP eCLIP24.93■■□□□ 1.58
MSH6-206ENST00000455383 PASKQ96RG2 1323 aa24.92■■□□□ 1.58
MSH6-206ENST00000455383 SCN4AP35499 1836 aa24.92■■□□□ 1.58
MSH6-206ENST00000455383 TAF1DQ9H5J8 278 aaPredicted RBP24.92■■□□□ 1.58
MSH6-206ENST00000455383 TAF7Q15545 349 aaPredicted RBP24.91■■□□□ 1.58
MSH6-206ENST00000455383 LDHDQ86WU2 507 aa24.91■■□□□ 1.58
MSH6-206ENST00000455383 HLFQ16534 295 aa24.9■■□□□ 1.58
MSH6-206ENST00000455383 RTKN2Q8IZC4 609 aa24.9■■□□□ 1.58
MSH6-206ENST00000455383 SNED1Q8TER0 1413 aa24.89■■□□□ 1.58
MSH6-206ENST00000455383 ZNF277Q9NRM2 450 aaPredicted RBP24.89■■□□□ 1.58
MSH6-206ENST00000455383 ZNF541Q9H0D2 1346 aa24.88■■□□□ 1.57
MSH6-206ENST00000455383 OLFM4Q6UX06 510 aa24.88■■□□□ 1.57
MSH6-206ENST00000455383 MKRN1Q9UHC7 482 aaKnown RBP24.88■■□□□ 1.57
MSH6-206ENST00000455383 LAMB4A4D0S4 1761 aa24.88■■□□□ 1.57
MSH6-206ENST00000455383 ALDH1B1P30837 517 aa24.87■■□□□ 1.57
MSH6-206ENST00000455383 CNTNAP1P78357 1384 aa24.87■■□□□ 1.57
MSH6-206ENST00000455383 ITGBL1O95965 494 aaPredicted RBP24.86■■□□□ 1.57
MSH6-206ENST00000455383 ADAMTSL1Q8N6G6 1762 aa24.85■■□□□ 1.57
MSH6-206ENST00000455383 FAM177BA6PVY3 158 aa24.85■■□□□ 1.57
MSH6-206ENST00000455383 ERVV-1B6SEH8 477 aa24.85■■□□□ 1.57
MSH6-206ENST00000455383 FZD9O00144 591 aa24.85■■□□□ 1.57
MSH6-206ENST00000455383 CAPN15O75808 1086 aa24.85■■□□□ 1.57
MSH6-206ENST00000455383 CRY2Q49AN0 593 aa24.85■■□□□ 1.57
MSH6-206ENST00000455383 MIS18AQ9NYP9 233 aa24.85■■□□□ 1.57
MSH6-206ENST00000455383 IARSP41252 1262 aaKnown RBP24.84■■□□□ 1.57
MSH6-206ENST00000455383 SYNE4Q8N205 404 aa24.84■■□□□ 1.57
MSH6-206ENST00000455383 ABCC12Q96J65 1359 aa24.83■■□□□ 1.57
MSH6-206ENST00000455383 KDM3BQ7LBC6 1761 aa24.83■■□□□ 1.57
MSH6-206ENST00000455383 PNISRQ8TF01 805 aaKnown RBP24.83■■□□□ 1.57
MSH6-206ENST00000455383 PSMD1Q99460 953 aa24.83■■□□□ 1.57
MSH6-206ENST00000455383 HACL1Q9UJ83 578 aa24.83■■□□□ 1.57
MSH6-206ENST00000455383 NYXQ9GZU5 481 aa24.82■■□□□ 1.56
MSH6-206ENST00000455383 RIC1Q4ADV7 1423 aa24.81■■□□□ 1.56
MSH6-206ENST00000455383 EPHX2P34913 555 aa24.81■■□□□ 1.56
MSH6-206ENST00000455383 MAP3K15Q6ZN16 1313 aa24.81■■□□□ 1.56
MSH6-206ENST00000455383 IBTKQ9P2D0 1353 aaPredicted RBP24.8■■□□□ 1.56
MSH6-206ENST00000455383 TMEM88BA6NKF7 163 aa24.8■■□□□ 1.56
MSH6-206ENST00000455383 GTF2E1P29083 439 aaPredicted RBP24.8■■□□□ 1.56
MSH6-206ENST00000455383 EIF4A1P60842 406 aaKnown RBP24.8■■□□□ 1.56
MSH6-206ENST00000455383 PLEKHF1Q96S99 279 aa24.8■■□□□ 1.56
MSH6-206ENST00000455383 NUP98P52948 1817 aa24.79■■□□□ 1.56
MSH6-206ENST00000455383 DLG5Q8TDM6 1919 aa24.79■■□□□ 1.56
MSH6-206ENST00000455383 HOXA10P31260 410 aaPredicted RBP24.79■■□□□ 1.56
MSH6-206ENST00000455383 EAPPQ56P03 285 aaPredicted RBP24.79■■□□□ 1.56
MSH6-206ENST00000455383 CC2D2BQ6DHV5 1058 aa24.79■■□□□ 1.56
MSH6-206ENST00000455383 PNMA8AQ86V59 439 aaPredicted RBP24.79■■□□□ 1.56
MSH6-206ENST00000455383 NUTM1Q86Y26 1132 aa24.79■■□□□ 1.56
MSH6-206ENST00000455383 GPC2Q8N158 579 aa24.79■■□□□ 1.56
MSH6-206ENST00000455383 TTLL7Q6ZT98 887 aa24.78■■□□□ 1.56
MSH6-206ENST00000455383 FOXN1O15353 648 aa24.77■■□□□ 1.56
MSH6-206ENST00000455383 NGEFQ8N5V2 710 aa24.77■■□□□ 1.56
MSH6-206ENST00000455383 COL4A5P29400 1685 aa24.77■■□□□ 1.56
MSH6-206ENST00000455383 RNF123Q5XPI4 1314 aa24.77■■□□□ 1.56
MSH6-206ENST00000455383 UBN2Q6ZU65 1347 aa24.77■■□□□ 1.56
MSH6-206ENST00000455383 VEGFBP49765 207 aa24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms