RNA–Protein interactions for RNA: ENST00000449476.6

CTC1-202, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 4,797 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-202ENST00000449476 ZSCAN23Q3MJ62 389 aa12.15□□□□□ -0.46
CTC1-202ENST00000449476 HMG20BQ9P0W2 317 aa12.15□□□□□ -0.46
CTC1-202ENST00000449476 CEP131Q9UPN4 1083 aa12.15□□□□□ -0.46
CTC1-202ENST00000449476 NCKAP5LQ9HCH0 1330 aa12.15□□□□□ -0.46
CTC1-202ENST00000449476 CTAGE5O15320 804 aa12.15□□□□□ -0.46
CTC1-202ENST00000449476 XRCC6P12956 609 aaKnown RBP eCLIP12.15□□□□□ -0.46
CTC1-202ENST00000449476 PLEKHM2Q8IWE5 1019 aa12.15□□□□□ -0.46
CTC1-202ENST00000449476 FLT4P35916 1363 aa12.15□□□□□ -0.46
CTC1-202ENST00000449476 RRP9O43818 475 aaKnown RBP12.15□□□□□ -0.46
CTC1-202ENST00000449476 CDR1P51861 262 aa12.15□□□□□ -0.46
CTC1-202ENST00000449476 NECAB1Q8N987 351 aa12.15□□□□□ -0.46
CTC1-202ENST00000449476 ZHX3Q9H4I2 956 aa12.15□□□□□ -0.46
CTC1-202ENST00000449476 ZBTB7BO15156 539 aaPredicted RBP12.15□□□□□ -0.46
CTC1-202ENST00000449476 ALDH1L1O75891 902 aa12.15□□□□□ -0.46
CTC1-202ENST00000449476 DDX46Q7L014 1031 aaKnown RBP12.15□□□□□ -0.46
CTC1-202ENST00000449476 COPS6Q7L5N1 327 aa12.15□□□□□ -0.46
CTC1-202ENST00000449476 FSIP1Q8NA03 581 aa12.15□□□□□ -0.46
CTC1-202ENST00000449476 XAGE3Q8WTP9 111 aa12.15□□□□□ -0.46
CTC1-202ENST00000449476 TCEANC2Q96MN5 208 aa12.15□□□□□ -0.46
CTC1-202ENST00000449476 ZNF652Q9Y2D9 606 aa12.15□□□□□ -0.46
CTC1-202ENST00000449476 ZFYVE9O95405 1425 aa12.15□□□□□ -0.47
CTC1-202ENST00000449476 GRM8O00222 908 aa12.14□□□□□ -0.47
CTC1-202ENST00000449476 ZSCAN22P10073 491 aaPredicted RBP12.14□□□□□ -0.47
CTC1-202ENST00000449476 SLC39A6Q13433 755 aa12.14□□□□□ -0.47
CTC1-202ENST00000449476 CAVIN4Q5BKX8 364 aa12.14□□□□□ -0.47
CTC1-202ENST00000449476 KSR2Q6VAB6 950 aa12.14□□□□□ -0.47
CTC1-202ENST00000449476 ABCC1P33527 1531 aa12.14□□□□□ -0.47
CTC1-202ENST00000449476 HAND2P61296 217 aa12.14□□□□□ -0.47
CTC1-202ENST00000449476 PTPN14Q15678 1187 aa12.14□□□□□ -0.47
CTC1-202ENST00000449476 EYA1Q99502 592 aa12.14□□□□□ -0.47
CTC1-202ENST00000449476 DEF6Q9H4E7 631 aa12.14□□□□□ -0.47
CTC1-202ENST00000449476 USP16Q9Y5T5 823 aa12.14□□□□□ -0.47
CTC1-202ENST00000449476 IFIT3O14879 490 aaKnown RBP12.14□□□□□ -0.47
CTC1-202ENST00000449476 PPFIA3O75145 1194 aa12.14□□□□□ -0.47
CTC1-202ENST00000449476 HCLS1P14317 486 aaPredicted RBP12.14□□□□□ -0.47
CTC1-202ENST00000449476 CLIP2Q9UDT6 1046 aa12.14□□□□□ -0.47
CTC1-202ENST00000449476 RBM8AQ9Y5S9 174 aaKnown RBP12.14□□□□□ -0.47
CTC1-202ENST00000449476 SLC12A7Q9Y666 1083 aa12.14□□□□□ -0.47
CTC1-202ENST00000449476 ADCY5O95622 1261 aa12.13□□□□□ -0.47
CTC1-202ENST00000449476 SLC5A1P13866 664 aa12.13□□□□□ -0.47
CTC1-202ENST00000449476 AKAP4Q5JQC9 854 aa12.13□□□□□ -0.47
CTC1-202ENST00000449476 BRF1Q92994 677 aa12.13□□□□□ -0.47
CTC1-202ENST00000449476 KDM2BQ8NHM5 1336 aa12.13□□□□□ -0.47
CTC1-202ENST00000449476 YTHDC2Q9H6S0 1430 aaKnown RBP12.13□□□□□ -0.47
CTC1-202ENST00000449476 ZNF165P49910 485 aa12.13□□□□□ -0.47
CTC1-202ENST00000449476 PANK2Q9BZ23 570 aa12.13□□□□□ -0.47
CTC1-202ENST00000449476 SSBP05455 408 aaKnown RBP eCLIP12.13□□□□□ -0.47
CTC1-202ENST00000449476 LRSAM1Q6UWE0 723 aa12.13□□□□□ -0.47
CTC1-202ENST00000449476 TANGO6Q9C0B7 1094 aa12.13□□□□□ -0.47
CTC1-202ENST00000449476 ZMYM4Q5VZL5 1548 aa12.13□□□□□ -0.47
CTC1-202ENST00000449476 ORC3Q9UBD5 711 aaPredicted RBP12.13□□□□□ -0.47
CTC1-202ENST00000449476 GOLGA8AA7E2F4 631 aa12.12□□□□□ -0.47
CTC1-202ENST00000449476 EIF4G3O43432 1585 aaKnown RBP12.12□□□□□ -0.47
CTC1-202ENST00000449476 RANBP6O60518 1105 aaKnown RBP12.12□□□□□ -0.47
CTC1-202ENST00000449476 KLHL10Q6JEL2 608 aa12.12□□□□□ -0.47
CTC1-202ENST00000449476 SPATA31E1Q6ZUB1 1445 aa12.12□□□□□ -0.47
CTC1-202ENST00000449476 KLHL34Q8N239 644 aa12.12□□□□□ -0.47
CTC1-202ENST00000449476 LINS1Q8NG48 757 aa12.12□□□□□ -0.47
CTC1-202ENST00000449476 PA2G4Q9UQ80 394 aaKnown RBP12.12□□□□□ -0.47
CTC1-202ENST00000449476 MAP3K19Q56UN5 1328 aa12.12□□□□□ -0.47
CTC1-202ENST00000449476 ODF2Q5BJF6 829 aa12.12□□□□□ -0.47
CTC1-202ENST00000449476 GIMAP6Q6P9H5 292 aa12.12□□□□□ -0.47
CTC1-202ENST00000449476 IQCA1Q86XH1 822 aa12.12□□□□□ -0.47
CTC1-202ENST00000449476 PDCL2Q8N4E4 241 aa12.12□□□□□ -0.47
CTC1-202ENST00000449476 CTCFLQ8NI51 663 aaPredicted RBP12.12□□□□□ -0.47
CTC1-202ENST00000449476 UBXN4Q92575 508 aa12.12□□□□□ -0.47
CTC1-202ENST00000449476 TEX13AQ9BXU3 409 aaPredicted RBP12.12□□□□□ -0.47
CTC1-202ENST00000449476 LUC7LQ9NQ29 371 aaKnown RBP12.12□□□□□ -0.47
CTC1-202ENST00000449476 TRIM35Q9UPQ4 493 aa12.12□□□□□ -0.47
CTC1-202ENST00000449476 SAMD9Q5K651 1589 aa12.12□□□□□ -0.47
CTC1-202ENST00000449476 KIF2AO00139 706 aaPredicted RBP12.11□□□□□ -0.47
CTC1-202ENST00000449476 RAB3GAP1Q15042 981 aa12.11□□□□□ -0.47
CTC1-202ENST00000449476 LRRC59Q96AG4 307 aaKnown RBP12.11□□□□□ -0.47
CTC1-202ENST00000449476 BMP2KQ9NSY1 1161 aaPredicted RBP12.11□□□□□ -0.47
CTC1-202ENST00000449476 MAGI3Q5TCQ9 1506 aa12.11□□□□□ -0.47
CTC1-202ENST00000449476 EPB41L2O43491 1005 aaKnown RBP12.11□□□□□ -0.47
CTC1-202ENST00000449476 ARHGAP29Q52LW3 1261 aa12.11□□□□□ -0.47
CTC1-202ENST00000449476 ZFYVE27Q5T4F4 411 aa12.11□□□□□ -0.47
CTC1-202ENST00000449476 RNF41Q9H4P4 317 aaPredicted RBP12.11□□□□□ -0.47
CTC1-202ENST00000449476 CCDC66A2RUB6 948 aa12.11□□□□□ -0.47
CTC1-202ENST00000449476 NOM1Q5C9Z4 860 aaKnown RBP12.11□□□□□ -0.47
CTC1-202ENST00000449476 LMBR1LQ6UX01 489 aa12.11□□□□□ -0.47
CTC1-202ENST00000449476 CADPS2Q86UW7 1296 aa12.11□□□□□ -0.47
CTC1-202ENST00000449476 POLR3DP05423 398 aaPredicted RBP12.11□□□□□ -0.47
CTC1-202ENST00000449476 MCM5P33992 734 aa12.11□□□□□ -0.47
CTC1-202ENST00000449476 IARSP41252 1262 aaKnown RBP12.11□□□□□ -0.47
CTC1-202ENST00000449476 MKNK2Q9HBH9 465 aa12.11□□□□□ -0.47
CTC1-202ENST00000449476 CNPY2Q9Y2B0 182 aa12.11□□□□□ -0.47
CTC1-202ENST00000449476 EXOC5O00471 708 aa12.1□□□□□ -0.47
CTC1-202ENST00000449476 BIN1O00499 593 aa12.1□□□□□ -0.47
CTC1-202ENST00000449476 USP5P45974 858 aa12.1□□□□□ -0.47
CTC1-202ENST00000449476 EIF5P55010 431 aaKnown RBP12.1□□□□□ -0.47
CTC1-202ENST00000449476 UVSSAQ2YD98 709 aa12.1□□□□□ -0.47
CTC1-202ENST00000449476 AXDND1Q5T1B0 1012 aaPredicted RBP12.1□□□□□ -0.47
CTC1-202ENST00000449476 USP48Q86UV5 1035 aa12.1□□□□□ -0.47
CTC1-202ENST00000449476 LRRC2Q9BYS8 371 aa12.1□□□□□ -0.47
CTC1-202ENST00000449476 ABCC2Q92887 1545 aa12.1□□□□□ -0.47
CTC1-202ENST00000449476 SSRP1Q08945 709 aaKnown RBP12.1□□□□□ -0.47
CTC1-202ENST00000449476 MICU3Q86XE3 530 aa12.1□□□□□ -0.47
CTC1-202ENST00000449476 RAB11FIP4Q86YS3 637 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms