RNA–Protein interactions for RNA: ENST00000448979.3

AC023509.3-201, humanhuman

TSL 1 (best)

Gene AC023509.3, Length 1,406 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC023509.3-201ENST00000448979 SNRPA1P09661 255 aaKnown RBP16.42■□□□□ 0.22
AC023509.3-201ENST00000448979 NEUROD2Q15784 382 aa16.42■□□□□ 0.22
AC023509.3-201ENST00000448979 PIM2Q9P1W9 311 aa16.42■□□□□ 0.22
AC023509.3-201ENST00000448979 SALL2Q9Y467 1007 aaPredicted RBP16.42■□□□□ 0.22
AC023509.3-201ENST00000448979 C1QTNF8P60827 252 aa16.41■□□□□ 0.22
AC023509.3-201ENST00000448979 DZIP3Q86Y13 1208 aaKnown RBP16.41■□□□□ 0.22
AC023509.3-201ENST00000448979 NGEFQ8N5V2 710 aa16.41■□□□□ 0.22
AC023509.3-201ENST00000448979 YTHDC1Q96MU7 727 aaKnown RBP16.41■□□□□ 0.22
AC023509.3-201ENST00000448979 BCORQ6W2J9 1755 aa16.41■□□□□ 0.22
AC023509.3-201ENST00000448979 A0A087WZG4 1122 aa16.4■□□□□ 0.22
AC023509.3-201ENST00000448979 GIGYF1O75420 1035 aaPredicted RBP16.4■□□□□ 0.22
AC023509.3-201ENST00000448979 DALRD3Q5D0E6 543 aaKnown RBP16.4■□□□□ 0.22
AC023509.3-201ENST00000448979 C2CD5Q86YS7 1000 aa16.39■□□□□ 0.21
AC023509.3-201ENST00000448979 COL11A2P13942 1736 aaPredicted RBP16.39■□□□□ 0.21
AC023509.3-201ENST00000448979 PRELPP51888 382 aa16.38■□□□□ 0.21
AC023509.3-201ENST00000448979 RIPK4P57078 832 aa16.38■□□□□ 0.21
AC023509.3-201ENST00000448979 EIF4A1P60842 406 aaKnown RBP16.38■□□□□ 0.21
AC023509.3-201ENST00000448979 HNRNPUQ00839 825 aaKnown RBP eCLIP16.38■□□□□ 0.21
AC023509.3-201ENST00000448979 RASSF7Q02833 373 aa16.38■□□□□ 0.21
AC023509.3-201ENST00000448979 HLFQ16534 295 aa16.38■□□□□ 0.21
AC023509.3-201ENST00000448979 PRR5LQ6MZQ0 368 aa16.38■□□□□ 0.21
AC023509.3-201ENST00000448979 ZNF219Q9P2Y4 722 aaPredicted RBP16.38■□□□□ 0.21
AC023509.3-201ENST00000448979 LAMB4A4D0S4 1761 aa16.38■□□□□ 0.21
AC023509.3-201ENST00000448979 DLEC1Q9Y238 1755 aa16.38■□□□□ 0.21
AC023509.3-201ENST00000448979 FAM177BA6PVY3 158 aa16.37■□□□□ 0.21
AC023509.3-201ENST00000448979 TMPOP42166 694 aaKnown RBP16.37■□□□□ 0.21
AC023509.3-201ENST00000448979 GPBP1L1Q9HC44 474 aaPredicted RBP16.37■□□□□ 0.21
AC023509.3-201ENST00000448979 SBF1O95248 1867 aa16.37■□□□□ 0.21
AC023509.3-201ENST00000448979 CACNA1SQ13698 1873 aa16.37■□□□□ 0.21
AC023509.3-201ENST00000448979 C9orf131Q5VYM1 1079 aa16.36■□□□□ 0.21
AC023509.3-201ENST00000448979 KRT24Q2M2I5 525 aa16.36■□□□□ 0.21
AC023509.3-201ENST00000448979 TTLL7Q6ZT98 887 aa16.36■□□□□ 0.21
AC023509.3-201ENST00000448979 CCDC88AQ3V6T2 1871 aa16.35■□□□□ 0.21
AC023509.3-201ENST00000448979 ANXA1P04083 346 aa16.35■□□□□ 0.21
AC023509.3-201ENST00000448979 MYL6BP14649 208 aa16.35■□□□□ 0.21
AC023509.3-201ENST00000448979 SETDB2Q96T68 719 aa16.35■□□□□ 0.21
AC023509.3-201ENST00000448979 FOXD4L1Q9NU39 408 aa16.35■□□□□ 0.21
AC023509.3-201ENST00000448979 NPM2Q86SE8 214 aaKnown RBP16.34■□□□□ 0.21
AC023509.3-201ENST00000448979 NECTIN2Q92692 538 aa16.34■□□□□ 0.21
AC023509.3-201ENST00000448979 ZNF622Q969S3 477 aaKnown RBP eCLIP16.34■□□□□ 0.21
AC023509.3-201ENST00000448979 TSPYL4Q9UJ04 414 aa16.34■□□□□ 0.21
AC023509.3-201ENST00000448979 H0YIN7 160 aa16.33■□□□□ 0.2
AC023509.3-201ENST00000448979 NMRK2Q9NPI5 230 aa16.33■□□□□ 0.2
AC023509.3-201ENST00000448979 TRIM35Q9UPQ4 493 aa16.33■□□□□ 0.2
AC023509.3-201ENST00000448979 SLX4Q8IY92 1834 aa16.33■□□□□ 0.2
AC023509.3-201ENST00000448979 NUP98P52948 1817 aa16.32■□□□□ 0.2
AC023509.3-201ENST00000448979 KIF3CO14782 793 aa16.32■□□□□ 0.2
AC023509.3-201ENST00000448979 PROSER3Q2NL68 480 aa16.32■□□□□ 0.2
AC023509.3-201ENST00000448979 CNBD1Q8NA66 436 aa16.32■□□□□ 0.2
AC023509.3-201ENST00000448979 RNF181Q9P0P0 153 aa16.32■□□□□ 0.2
AC023509.3-201ENST00000448979 NIP7Q9Y221 180 aaKnown RBP eCLIP16.32■□□□□ 0.2
AC023509.3-201ENST00000448979 NPHP1O15259 732 aa16.31■□□□□ 0.2
AC023509.3-201ENST00000448979 EIF2S2P20042 333 aaKnown RBP16.31■□□□□ 0.2
AC023509.3-201ENST00000448979 TTLL6Q8N841 843 aa16.31■□□□□ 0.2
AC023509.3-201ENST00000448979 BRIP1Q9BX63 1249 aa16.31■□□□□ 0.2
AC023509.3-201ENST00000448979 LAS1LQ9Y4W2 734 aaKnown RBP16.31■□□□□ 0.2
AC023509.3-201ENST00000448979 C21orf2O43822 256 aa16.3■□□□□ 0.2
AC023509.3-201ENST00000448979 ABCB7O75027 752 aa16.3■□□□□ 0.2
AC023509.3-201ENST00000448979 ZNF428Q96B54 188 aa16.3■□□□□ 0.2
AC023509.3-201ENST00000448979 ZBTB3Q9H5J0 574 aa16.3■□□□□ 0.2
AC023509.3-201ENST00000448979 NFKBIEO00221 500 aa16.29■□□□□ 0.2
AC023509.3-201ENST00000448979 GPTP24298 496 aa16.29■□□□□ 0.2
AC023509.3-201ENST00000448979 LMOD3Q0VAK6 560 aa16.29■□□□□ 0.2
AC023509.3-201ENST00000448979 OLFM4Q6UX06 510 aa16.29■□□□□ 0.2
AC023509.3-201ENST00000448979 SLC51AQ86UW1 340 aa16.29■□□□□ 0.2
AC023509.3-201ENST00000448979 NBPF5PQ86XG9 351 aaPredicted RBP16.29■□□□□ 0.2
AC023509.3-201ENST00000448979 TNRC6CQ9HCJ0 1690 aaKnown RBP16.28■□□□□ 0.2
AC023509.3-201ENST00000448979 PDIA6Q15084 440 aa16.28■□□□□ 0.2
AC023509.3-201ENST00000448979 NUTM1Q86Y26 1132 aa16.28■□□□□ 0.2
AC023509.3-201ENST00000448979 PDE6BP35913 854 aa16.28■□□□□ 0.2
AC023509.3-201ENST00000448979 CLEC4GQ6UXB4 293 aa16.28■□□□□ 0.2
AC023509.3-201ENST00000448979 LRP10Q7Z4F1 713 aa16.28■□□□□ 0.2
AC023509.3-201ENST00000448979 WWC1Q8IX03 1113 aa16.28■□□□□ 0.2
AC023509.3-201ENST00000448979 SRGNP10124 158 aa16.27■□□□□ 0.19
AC023509.3-201ENST00000448979 ST5P78524 1137 aa16.27■□□□□ 0.19
AC023509.3-201ENST00000448979 ZNF652Q9Y2D9 606 aa16.27■□□□□ 0.19
AC023509.3-201ENST00000448979 MAP3K15Q6ZN16 1313 aa16.26■□□□□ 0.19
AC023509.3-201ENST00000448979 UBN2Q6ZU65 1347 aa16.26■□□□□ 0.19
AC023509.3-201ENST00000448979 ABCC12Q96J65 1359 aa16.26■□□□□ 0.19
AC023509.3-201ENST00000448979 FER1L6Q2WGJ9 1857 aa16.26■□□□□ 0.19
AC023509.3-201ENST00000448979 CCDC27Q2M243 656 aa16.25■□□□□ 0.19
AC023509.3-201ENST00000448979 ERFEQ4G0M1 354 aa16.25■□□□□ 0.19
AC023509.3-201ENST00000448979 PRPF40BQ6NWY9 871 aaKnown RBP16.25■□□□□ 0.19
AC023509.3-201ENST00000448979 RRAGCQ9HB90 399 aa16.25■□□□□ 0.19
AC023509.3-201ENST00000448979 CHL1O00533 1208 aa16.24■□□□□ 0.19
AC023509.3-201ENST00000448979 AIMP1Q12904 312 aaKnown RBP16.24■□□□□ 0.19
AC023509.3-201ENST00000448979 SUSD4Q5VX71 490 aa16.24■□□□□ 0.19
AC023509.3-201ENST00000448979 C3orf67Q6ZVT6 689 aa16.24■□□□□ 0.19
AC023509.3-201ENST00000448979 TIAM2Q8IVF5 1701 aa16.24■□□□□ 0.19
AC023509.3-201ENST00000448979 TPTE2Q6XPS3 522 aa16.23■□□□□ 0.19
AC023509.3-201ENST00000448979 KIF6Q6ZMV9 814 aa16.23■□□□□ 0.19
AC023509.3-201ENST00000448979 MASTLQ96GX5 879 aa16.23■□□□□ 0.19
AC023509.3-201ENST00000448979 ZBED9Q6R2W3 1325 aa16.23■□□□□ 0.19
AC023509.3-201ENST00000448979 ARFGEF2Q9Y6D5 1785 aa16.23■□□□□ 0.19
AC023509.3-201ENST00000448979 LMNB1P20700 586 aa16.22■□□□□ 0.19
AC023509.3-201ENST00000448979 STYK1Q6J9G0 422 aa16.22■□□□□ 0.19
AC023509.3-201ENST00000448979 ERVV-1B6SEH8 477 aa16.21■□□□□ 0.19
AC023509.3-201ENST00000448979 GTF2E1P29083 439 aaPredicted RBP16.21■□□□□ 0.19
AC023509.3-201ENST00000448979 CALD1Q05682 793 aaKnown RBP16.21■□□□□ 0.19
AC023509.3-201ENST00000448979 COPS6Q7L5N1 327 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms