RNA–Protein interactions for RNA: ENST00000448450.5

HTATSF1-203, Transcript of HIV-1 Tat specific factor 1, humanhuman

TSL 5

Gene HTATSF1, Length 1,014 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-203ENST00000448450 LMNB1P20700 586 aa32.74■■■□□ 2.83
HTATSF1-203ENST00000448450 IL6STP40189 918 aaPredicted RBP32.74■■■□□ 2.83
HTATSF1-203ENST00000448450 TTLL6Q8N841 843 aa32.74■■■□□ 2.83
HTATSF1-203ENST00000448450 A0A087WZG4 1122 aa32.73■■■□□ 2.83
HTATSF1-203ENST00000448450 NPM2Q86SE8 214 aaKnown RBP32.73■■■□□ 2.83
HTATSF1-203ENST00000448450 TBC1D2BQ9UPU7 963 aa32.73■■■□□ 2.83
HTATSF1-203ENST00000448450 SCN7AQ01118 1682 aa32.72■■■□□ 2.83
HTATSF1-203ENST00000448450 C2CD5Q86YS7 1000 aa32.72■■■□□ 2.83
HTATSF1-203ENST00000448450 HTRA3P83110 453 aa32.71■■■□□ 2.83
HTATSF1-203ENST00000448450 SMC1BQ8NDV3 1235 aa32.71■■■□□ 2.83
HTATSF1-203ENST00000448450 KLRG1Q96E93 195 aa32.71■■■□□ 2.83
HTATSF1-203ENST00000448450 BABAM1Q9NWV8 329 aa32.71■■■□□ 2.83
HTATSF1-203ENST00000448450 CCDC88AQ3V6T2 1871 aa32.71■■■□□ 2.83
HTATSF1-203ENST00000448450 CARMIL3Q8ND23 1372 aa32.7■■■□□ 2.83
HTATSF1-203ENST00000448450 H0YIN7 160 aa32.7■■■□□ 2.83
HTATSF1-203ENST00000448450 BICDL1Q6ZP65 573 aa32.69■■■□□ 2.82
HTATSF1-203ENST00000448450 NBPF26B4DH59 902 aa32.68■■■□□ 2.82
HTATSF1-203ENST00000448450 CHL1O00533 1208 aa32.68■■■□□ 2.82
HTATSF1-203ENST00000448450 NBPF10Q6P3W6 841 aaKnown RBP32.68■■■□□ 2.82
HTATSF1-203ENST00000448450 NBPF15Q8N660 670 aa32.68■■■□□ 2.82
HTATSF1-203ENST00000448450 PCNTO95613 3336 aa32.67■■■□□ 2.82
HTATSF1-203ENST00000448450 ANKRD31Q8N7Z5 1873 aa32.67■■■□□ 2.82
HTATSF1-203ENST00000448450 GLTPD2A6NH11 291 aa32.66■■■□□ 2.82
HTATSF1-203ENST00000448450 FAM9BQ8IZU0 186 aa32.66■■■□□ 2.82
HTATSF1-203ENST00000448450 JMYQ8N9B5 988 aa32.65■■■□□ 2.82
HTATSF1-203ENST00000448450 VEGFAP15692 232 aaPredicted RBP32.64■■■□□ 2.82
HTATSF1-203ENST00000448450 DZIP3Q86Y13 1208 aaKnown RBP32.64■■■□□ 2.82
HTATSF1-203ENST00000448450 LAMB4A4D0S4 1761 aa32.63■■■□□ 2.81
HTATSF1-203ENST00000448450 EIF2S2P20042 333 aaKnown RBP32.63■■■□□ 2.81
HTATSF1-203ENST00000448450 PRELPP51888 382 aa32.63■■■□□ 2.81
HTATSF1-203ENST00000448450 NGEFQ8N5V2 710 aa32.63■■■□□ 2.81
HTATSF1-203ENST00000448450 PDZRN3Q9UPQ7 1066 aa32.63■■■□□ 2.81
HTATSF1-203ENST00000448450 COL11A2P13942 1736 aaPredicted RBP32.63■■■□□ 2.81
HTATSF1-203ENST00000448450 NFKBIEO00221 500 aa32.62■■■□□ 2.81
HTATSF1-203ENST00000448450 KRT24Q2M2I5 525 aa32.62■■■□□ 2.81
HTATSF1-203ENST00000448450 TBC1D9BQ66K14 1250 aa32.62■■■□□ 2.81
HTATSF1-203ENST00000448450 CFAP44Q96MT7 982 aa32.62■■■□□ 2.81
HTATSF1-203ENST00000448450 CAMTA2O94983 1202 aa32.61■■■□□ 2.81
HTATSF1-203ENST00000448450 PDE6BP35913 854 aa32.6■■■□□ 2.81
HTATSF1-203ENST00000448450 BRIP1Q9BX63 1249 aa32.6■■■□□ 2.81
HTATSF1-203ENST00000448450 MYL6BP14649 208 aa32.59■■■□□ 2.81
HTATSF1-203ENST00000448450 CALD1Q05682 793 aaKnown RBP32.59■■■□□ 2.81
HTATSF1-203ENST00000448450 NECTIN2Q92692 538 aa32.59■■■□□ 2.81
HTATSF1-203ENST00000448450 ZNF622Q969S3 477 aaKnown RBP eCLIP32.59■■■□□ 2.812e-8■■□□□ 13.4
HTATSF1-203ENST00000448450 SALL2Q9Y467 1007 aaPredicted RBP32.59■■■□□ 2.81
HTATSF1-203ENST00000448450 DICER1Q9UPY3 1922 aaKnown RBP32.59■■■□□ 2.81
HTATSF1-203ENST00000448450 MBIPQ9NS73 344 aa32.58■■■□□ 2.81
HTATSF1-203ENST00000448450 FER1L6Q2WGJ9 1857 aa32.58■■■□□ 2.81
HTATSF1-203ENST00000448450 PRR5LQ6MZQ0 368 aa32.57■■■□□ 2.8
HTATSF1-203ENST00000448450 BCORQ6W2J9 1755 aa32.56■■■□□ 2.8
HTATSF1-203ENST00000448450 ZNF853P0CG23 659 aa32.56■■■□□ 2.8
HTATSF1-203ENST00000448450 GNAI1P63096 354 aa32.56■■■□□ 2.8
HTATSF1-203ENST00000448450 IFT57Q9NWB7 429 aa32.56■■■□□ 2.8
HTATSF1-203ENST00000448450 NPHP1O15259 732 aa32.55■■■□□ 2.8
HTATSF1-203ENST00000448450 DPY19L2Q6NUT2 758 aa32.55■■■□□ 2.8
HTATSF1-203ENST00000448450 CNBD1Q8NA66 436 aa32.54■■■□□ 2.8
HTATSF1-203ENST00000448450 CACNA1SQ13698 1873 aa32.54■■■□□ 2.8
HTATSF1-203ENST00000448450 C21orf2O43822 256 aa32.53■■■□□ 2.8
HTATSF1-203ENST00000448450 WWC1Q8IX03 1113 aa32.53■■■□□ 2.8
HTATSF1-203ENST00000448450 SETDB2Q96T68 719 aa32.53■■■□□ 2.8
HTATSF1-203ENST00000448450 ANXA1P04083 346 aa32.52■■■□□ 2.8
HTATSF1-203ENST00000448450 CCDC27Q2M243 656 aa32.52■■■□□ 2.8
HTATSF1-203ENST00000448450 CCDC24Q8N4L8 307 aa32.52■■■□□ 2.8
HTATSF1-203ENST00000448450 ZNF219Q9P2Y4 722 aaPredicted RBP32.52■■■□□ 2.8
HTATSF1-203ENST00000448450 ERFEQ4G0M1 354 aa32.51■■■□□ 2.79
HTATSF1-203ENST00000448450 TTLL7Q6ZT98 887 aa32.51■■■□□ 2.79
HTATSF1-203ENST00000448450 ARFGEF2Q9Y6D5 1785 aa32.5■■■□□ 2.79
HTATSF1-203ENST00000448450 ST5P78524 1137 aa32.5■■■□□ 2.79
HTATSF1-203ENST00000448450 ERBB4Q15303 1308 aa32.5■■■□□ 2.79
HTATSF1-203ENST00000448450 PDIA6Q15084 440 aa32.49■■■□□ 2.79
HTATSF1-203ENST00000448450 HLFQ16534 295 aa32.49■■■□□ 2.79
HTATSF1-203ENST00000448450 PROSER3Q2NL68 480 aa32.49■■■□□ 2.79
HTATSF1-203ENST00000448450 DUSP27Q5VZP5 1158 aa32.49■■■□□ 2.79
HTATSF1-203ENST00000448450 ZNF652Q9Y2D9 606 aa32.49■■■□□ 2.79
HTATSF1-203ENST00000448450 LTBP3Q9NS15 1303 aa32.49■■■□□ 2.79
HTATSF1-203ENST00000448450 COL13A1Q5TAT6 717 aaPredicted RBP32.48■■■□□ 2.79
HTATSF1-203ENST00000448450 CLEC4GQ6UXB4 293 aa32.48■■■□□ 2.79
HTATSF1-203ENST00000448450 CNKSR1Q969H4 720 aa32.48■■■□□ 2.79
HTATSF1-203ENST00000448450 TAOK3Q9H2K8 898 aa32.48■■■□□ 2.79
HTATSF1-203ENST00000448450 SLX4Q8IY92 1834 aa32.47■■■□□ 2.79
HTATSF1-203ENST00000448450 ELL2O00472 640 aaPredicted RBP32.47■■■□□ 2.79
HTATSF1-203ENST00000448450 KIF6Q6ZMV9 814 aa32.47■■■□□ 2.79
HTATSF1-203ENST00000448450 STYK1Q6J9G0 422 aa32.46■■■□□ 2.79
HTATSF1-203ENST00000448450 POTECB2RU33 542 aa32.45■■■□□ 2.79
HTATSF1-203ENST00000448450 SOGA3Q5TF21 947 aa32.45■■■□□ 2.79
HTATSF1-203ENST00000448450 HDGFL1Q5TGJ6 251 aa32.45■■■□□ 2.79
HTATSF1-203ENST00000448450 TSR2Q969E8 191 aaKnown RBP32.45■■■□□ 2.79
HTATSF1-203ENST00000448450 ZBTB3Q9H5J0 574 aa32.45■■■□□ 2.79
HTATSF1-203ENST00000448450 SRGNP10124 158 aa32.44■■■□□ 2.78
HTATSF1-203ENST00000448450 NCBP3Q53F19 620 aaKnown RBP32.44■■■□□ 2.78
HTATSF1-203ENST00000448450 PRPF40BQ6NWY9 871 aaKnown RBP32.44■■■□□ 2.78
HTATSF1-203ENST00000448450 NIP7Q9Y221 180 aaKnown RBP eCLIP32.44■■■□□ 2.78
HTATSF1-203ENST00000448450 MAP3K15Q6ZN16 1313 aa32.44■■■□□ 2.78
HTATSF1-203ENST00000448450 HOXB7P09629 217 aa32.43■■■□□ 2.78
HTATSF1-203ENST00000448450 LRP10Q7Z4F1 713 aa32.43■■■□□ 2.78
HTATSF1-203ENST00000448450 C8orf58Q8NAV2 365 aa32.43■■■□□ 2.78
HTATSF1-203ENST00000448450 CHPF2Q9P2E5 772 aa32.43■■■□□ 2.78
HTATSF1-203ENST00000448450 ERVV-1B6SEH8 477 aa32.42■■■□□ 2.78
HTATSF1-203ENST00000448450 AIMP1Q12904 312 aaKnown RBP32.42■■■□□ 2.78
HTATSF1-203ENST00000448450 DIEXFQ68CQ4 756 aaKnown RBP32.42■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms