RNA–Protein interactions for RNA: ENST00000448190.6

SNHG4-201, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 4

Gene SNHG4, Length 542 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-201ENST00000448190 HOXB7P09629 217 aa17.27■□□□□ 0.36
SNHG4-201ENST00000448190 TWISTNBQ3B726 338 aaPredicted RBP17.27■□□□□ 0.36
SNHG4-201ENST00000448190 SETDB2Q96T68 719 aa17.27■□□□□ 0.36
SNHG4-201ENST00000448190 DBF4Q9UBU7 674 aaPredicted RBP17.27■□□□□ 0.36
SNHG4-201ENST00000448190 ERBB4Q15303 1308 aa17.26■□□□□ 0.35
SNHG4-201ENST00000448190 LRP5O75197 1615 aa17.26■□□□□ 0.35
SNHG4-201ENST00000448190 KDM3BQ7LBC6 1761 aa17.26■□□□□ 0.35
SNHG4-201ENST00000448190 PELP1Q8IZL8 1130 aaKnown RBP17.26■□□□□ 0.35
SNHG4-201ENST00000448190 ZNF428Q96B54 188 aa17.26■□□□□ 0.35
SNHG4-201ENST00000448190 MYH16Q9H6N6 1097 aa17.26■□□□□ 0.35
SNHG4-201ENST00000448190 CD2APQ9Y5K6 639 aa17.26■□□□□ 0.35
SNHG4-201ENST00000448190 CICQ96RK0 1608 aaPredicted RBP17.25■□□□□ 0.35
SNHG4-201ENST00000448190 MAP3K15Q6ZN16 1313 aa17.25■□□□□ 0.35
SNHG4-201ENST00000448190 QSER1Q2KHR3 1735 aa17.25■□□□□ 0.35
SNHG4-201ENST00000448190 A0A0G2JLW4 131 aa17.25■□□□□ 0.35
SNHG4-201ENST00000448190 PHAXQ9H814 394 aaKnown RBP17.25■□□□□ 0.35
SNHG4-201ENST00000448190 NIP7Q9Y221 180 aaKnown RBP eCLIP17.25■□□□□ 0.351e-323■■□□□ 14.4
SNHG4-201ENST00000448190 GPTP24298 496 aa17.24■□□□□ 0.35
SNHG4-201ENST00000448190 HNRNPUQ00839 825 aaKnown RBP eCLIP17.24■□□□□ 0.35
SNHG4-201ENST00000448190 CCDC30Q5VVM6 783 aa17.24■□□□□ 0.35
SNHG4-201ENST00000448190 CLEC4GQ6UXB4 293 aa17.24■□□□□ 0.35
SNHG4-201ENST00000448190 ZNF652Q9Y2D9 606 aa17.24■□□□□ 0.35
SNHG4-201ENST00000448190 ERVV-1B6SEH8 477 aa17.23■□□□□ 0.35
SNHG4-201ENST00000448190 VAMP4O75379 141 aa17.23■□□□□ 0.35
SNHG4-201ENST00000448190 SLFN5Q08AF3 891 aa17.23■□□□□ 0.35
SNHG4-201ENST00000448190 HYPKQ9NX55 129 aa17.23■□□□□ 0.35
SNHG4-201ENST00000448190 NPHP1O15259 732 aa17.22■□□□□ 0.35
SNHG4-201ENST00000448190 ANKRD13DQ6ZTN6 518 aa17.22■□□□□ 0.35
SNHG4-201ENST00000448190 E9PSI1 815 aa17.21■□□□□ 0.35
SNHG4-201ENST00000448190 SLC4A2P04920 1241 aa17.21■□□□□ 0.35
SNHG4-201ENST00000448190 DPEP1P16444 411 aa17.21■□□□□ 0.35
SNHG4-201ENST00000448190 GPR162Q16538 588 aa17.21■□□□□ 0.35
SNHG4-201ENST00000448190 G2E3Q7L622 706 aa17.21■□□□□ 0.35
SNHG4-201ENST00000448190 NBPF5PQ86XG9 351 aaPredicted RBP17.21■□□□□ 0.35
SNHG4-201ENST00000448190 GOLGB1Q14789 3259 aaKnown RBP17.2■□□□□ 0.34
SNHG4-201ENST00000448190 CHRNA5P30532 468 aa17.2■□□□□ 0.34
SNHG4-201ENST00000448190 PRR5LQ6MZQ0 368 aa17.2■□□□□ 0.34
SNHG4-201ENST00000448190 GIGYF2Q6Y7W6 1299 aaKnown RBP17.2■□□□□ 0.34
SNHG4-201ENST00000448190 STK31Q9BXU1 1019 aa17.2■□□□□ 0.34
SNHG4-201ENST00000448190 DCAF8L1A6NGE4 600 aa17.19■□□□□ 0.34
SNHG4-201ENST00000448190 ZNF34Q8IZ26 560 aa17.19■□□□□ 0.34
SNHG4-201ENST00000448190 ATP5J2-PTCD1G3V325 749 aa17.18■□□□□ 0.34
SNHG4-201ENST00000448190 GTF2E1P29083 439 aaPredicted RBP17.18■□□□□ 0.34
SNHG4-201ENST00000448190 TGFB2P61812 414 aa17.18■□□□□ 0.34
SNHG4-201ENST00000448190 SUSD4Q5VX71 490 aa17.18■□□□□ 0.34
SNHG4-201ENST00000448190 RIC3Q7Z5B4 369 aa17.18■□□□□ 0.34
SNHG4-201ENST00000448190 CNBD1Q8NA66 436 aa17.18■□□□□ 0.34
SNHG4-201ENST00000448190 PLBD2Q8NHP8 589 aa17.18■□□□□ 0.34
SNHG4-201ENST00000448190 CHMP4AQ9BY43 222 aa17.18■□□□□ 0.34
SNHG4-201ENST00000448190 CARMIL3Q8ND23 1372 aa17.17■□□□□ 0.34
SNHG4-201ENST00000448190 C4AP0C0L4 1744 aa17.17■□□□□ 0.34
SNHG4-201ENST00000448190 KCNA3P22001 575 aa17.17■□□□□ 0.34
SNHG4-201ENST00000448190 TCIRG1Q13488 830 aa17.17■□□□□ 0.34
SNHG4-201ENST00000448190 TPTE2Q6XPS3 522 aa17.17■□□□□ 0.34
SNHG4-201ENST00000448190 NUTM1Q86Y26 1132 aa17.17■□□□□ 0.34
SNHG4-201ENST00000448190 UBN2Q6ZU65 1347 aa17.17■□□□□ 0.34
SNHG4-201ENST00000448190 YBX3P16989 372 aaKnown RBP eCLIP17.16■□□□□ 0.34
SNHG4-201ENST00000448190 ERFEQ4G0M1 354 aa17.16■□□□□ 0.34
SNHG4-201ENST00000448190 C2CD5Q86YS7 1000 aa17.16■□□□□ 0.34
SNHG4-201ENST00000448190 TRMT2AQ8IZ69 625 aaKnown RBP17.16■□□□□ 0.34
SNHG4-201ENST00000448190 RGL2O15211 777 aa17.15■□□□□ 0.34
SNHG4-201ENST00000448190 ST5P78524 1137 aa17.15■□□□□ 0.34
SNHG4-201ENST00000448190 SYNE4Q8N205 404 aa17.15■□□□□ 0.34
SNHG4-201ENST00000448190 BRIP1Q9BX63 1249 aa17.15■□□□□ 0.34
SNHG4-201ENST00000448190 C10orf71Q711Q0 1435 aa17.14■□□□□ 0.33
SNHG4-201ENST00000448190 PI4KAP2A4QPH2 592 aa17.14■□□□□ 0.33
SNHG4-201ENST00000448190 H0YIN7 160 aa17.14■□□□□ 0.33
SNHG4-201ENST00000448190 PI4KAP1Q8N8J0 262 aa17.14■□□□□ 0.33
SNHG4-201ENST00000448190 MYD88Q99836 296 aa17.14■□□□□ 0.33
SNHG4-201ENST00000448190 BCS1LQ9Y276 419 aa17.14■□□□□ 0.33
SNHG4-201ENST00000448190 MAP3K2Q9Y2U5 619 aa17.14■□□□□ 0.33
SNHG4-201ENST00000448190 DDX58O95786 925 aaKnown RBP17.13■□□□□ 0.33
SNHG4-201ENST00000448190 HSP90AB3PQ58FF7 597 aa17.13■□□□□ 0.33
SNHG4-201ENST00000448190 RTL5Q5HYW3 569 aaPredicted RBP17.13■□□□□ 0.33
SNHG4-201ENST00000448190 NLRP10Q86W26 655 aa17.13■□□□□ 0.33
SNHG4-201ENST00000448190 ZNF622Q969S3 477 aaKnown RBP eCLIP17.13■□□□□ 0.33
SNHG4-201ENST00000448190 UTP14AQ9BVJ6 771 aaKnown RBP17.13■□□□□ 0.33
SNHG4-201ENST00000448190 UTRNP46939 3433 aa17.13■□□□□ 0.33
SNHG4-201ENST00000448190 COL24A1Q17RW2 1714 aa17.13■□□□□ 0.33
SNHG4-201ENST00000448190 PDE6BP35913 854 aa17.12■□□□□ 0.33
SNHG4-201ENST00000448190 FLIIQ13045 1269 aa17.12■□□□□ 0.33
SNHG4-201ENST00000448190 KSR2Q6VAB6 950 aa17.12■□□□□ 0.33
SNHG4-201ENST00000448190 PPP1R42Q7Z4L9 355 aa17.12■□□□□ 0.33
SNHG4-201ENST00000448190 JARID2Q92833 1246 aaPredicted RBP17.12■□□□□ 0.33
SNHG4-201ENST00000448190 NYXQ9GZU5 481 aa17.12■□□□□ 0.33
SNHG4-201ENST00000448190 PIM2Q9P1W9 311 aa17.12■□□□□ 0.33
SNHG4-201ENST00000448190 TRMT112Q9UI30 125 aaKnown RBP17.12■□□□□ 0.33
SNHG4-201ENST00000448190 PXDNLA1KZ92 1463 aa17.12■□□□□ 0.33
SNHG4-201ENST00000448190 LAMB4A4D0S4 1761 aa17.11■□□□□ 0.33
SNHG4-201ENST00000448190 NTSR2O95665 410 aa17.11■□□□□ 0.33
SNHG4-201ENST00000448190 FKBP5Q13451 457 aaPredicted RBP17.11■□□□□ 0.33
SNHG4-201ENST00000448190 PARP10Q53GL7 1025 aa17.11■□□□□ 0.33
SNHG4-201ENST00000448190 ISCA1Q9BUE6 129 aa17.11■□□□□ 0.33
SNHG4-201ENST00000448190 BCL2L13Q9BXK5 485 aa17.11■□□□□ 0.33
SNHG4-201ENST00000448190 ZNF219Q9P2Y4 722 aaPredicted RBP17.11■□□□□ 0.33
SNHG4-201ENST00000448190 HCLS1P14317 486 aaPredicted RBP17.1■□□□□ 0.33
SNHG4-201ENST00000448190 DALRD3Q5D0E6 543 aaKnown RBP17.1■□□□□ 0.33
SNHG4-201ENST00000448190 SSH1Q8WYL5 1049 aa17.1■□□□□ 0.33
SNHG4-201ENST00000448190 METTL22Q9BUU2 404 aaPredicted RBP17.1■□□□□ 0.33
SNHG4-201ENST00000448190 ATP10DQ9P241 1426 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 116.6 ms