RNA–Protein interactions for RNA: ENST00000447024.5

SMARCE1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-206ENST00000447024 RUBCNLQ9H714 662 aa12.25□□□□□ -0.45
SMARCE1-206ENST00000447024 MTUS2Q5JR59 1369 aa12.25□□□□□ -0.45
SMARCE1-206ENST00000447024 ADGRL1O94910 1474 aa12.25□□□□□ -0.45
SMARCE1-206ENST00000447024 ZMYM4Q5VZL5 1548 aa12.25□□□□□ -0.45
SMARCE1-206ENST00000447024 PROCP04070 461 aa12.24□□□□□ -0.45
SMARCE1-206ENST00000447024 ESCO1Q5FWF5 840 aa12.24□□□□□ -0.45
SMARCE1-206ENST00000447024 FRMPD1Q5SYB0 1578 aa12.24□□□□□ -0.45
SMARCE1-206ENST00000447024 RICTORQ6R327 1708 aa12.24□□□□□ -0.45
SMARCE1-206ENST00000447024 C1orf229Q6ZS94 237 aaPredicted RBP12.24□□□□□ -0.45
SMARCE1-206ENST00000447024 SCAPERQ9BY12 1400 aa12.24□□□□□ -0.45
SMARCE1-206ENST00000447024 ARHGAP5Q13017 1502 aa12.23□□□□□ -0.45
SMARCE1-206ENST00000447024 POGZQ7Z3K3 1410 aa12.23□□□□□ -0.45
SMARCE1-206ENST00000447024 VPS8Q8N3P4 1428 aa12.23□□□□□ -0.45
SMARCE1-206ENST00000447024 STAU1O95793 577 aaKnown RBP12.23□□□□□ -0.45
SMARCE1-206ENST00000447024 TSGA10IPQ3SY00 556 aa12.23□□□□□ -0.45
SMARCE1-206ENST00000447024 GALNT6Q8NCL4 622 aa12.23□□□□□ -0.45
SMARCE1-206ENST00000447024 TBC1D2BQ9UPU7 963 aa12.23□□□□□ -0.45
SMARCE1-206ENST00000447024 PREX2Q70Z35 1606 aa12.22□□□□□ -0.45
SMARCE1-206ENST00000447024 ZNF518AQ6AHZ1 1483 aa12.22□□□□□ -0.45
SMARCE1-206ENST00000447024 CSB-PGBD3P0DP91 1061 aa12.22□□□□□ -0.45
SMARCE1-206ENST00000447024 MSX1P28360 303 aa12.22□□□□□ -0.45
SMARCE1-206ENST00000447024 PGBD3Q8N328 593 aa12.22□□□□□ -0.45
SMARCE1-206ENST00000447024 ETNK1Q9HBU6 452 aa12.22□□□□□ -0.45
SMARCE1-206ENST00000447024 GDF2Q9UK05 429 aaPredicted RBP12.22□□□□□ -0.45
SMARCE1-206ENST00000447024 DOLKQ9UPQ8 538 aa12.22□□□□□ -0.45
SMARCE1-206ENST00000447024 ADAM23O75077 832 aa12.21□□□□□ -0.45
SMARCE1-206ENST00000447024 PHTF2Q8N3S3 785 aa12.21□□□□□ -0.45
SMARCE1-206ENST00000447024 RHBDD1Q8TEB9 315 aa12.21□□□□□ -0.45
SMARCE1-206ENST00000447024 MAP3K1Q13233 1512 aa12.21□□□□□ -0.46
SMARCE1-206ENST00000447024 EHBP1L1Q8N3D4 1523 aa12.21□□□□□ -0.46
SMARCE1-206ENST00000447024 ARHGEF40Q8TER5 1519 aa12.21□□□□□ -0.46
SMARCE1-206ENST00000447024 EFHC2Q5JST6 749 aa12.2□□□□□ -0.46
SMARCE1-206ENST00000447024 MKL2Q9ULH7 1088 aa12.2□□□□□ -0.46
SMARCE1-206ENST00000447024 ATXN7L1Q9ULK2 861 aaPredicted RBP12.2□□□□□ -0.46
SMARCE1-206ENST00000447024 PLEKHH2Q8IVE3 1493 aa12.2□□□□□ -0.46
SMARCE1-206ENST00000447024 CDC42BPBQ9Y5S2 1711 aa12.2□□□□□ -0.46
SMARCE1-206ENST00000447024 CCNB3Q8WWL7 1395 aa12.19□□□□□ -0.46
SMARCE1-206ENST00000447024 EIF4G2P78344 907 aaKnown RBP eCLIP12.19□□□□□ -0.46
SMARCE1-206ENST00000447024 USP4Q13107 963 aa12.19□□□□□ -0.46
SMARCE1-206ENST00000447024 EDARADDQ8WWZ3 215 aa12.19□□□□□ -0.46
SMARCE1-206ENST00000447024 ABHD17AQ96GS6 310 aa12.19□□□□□ -0.46
SMARCE1-206ENST00000447024 ZFYVE16Q7Z3T8 1539 aa12.18□□□□□ -0.46
SMARCE1-206ENST00000447024 GPATCH8Q9UKJ3 1502 aaKnown RBP12.18□□□□□ -0.46
SMARCE1-206ENST00000447024 CDC42BPAQ5VT25 1732 aa12.18□□□□□ -0.46
SMARCE1-206ENST00000447024 TLR1Q15399 786 aa12.18□□□□□ -0.46
SMARCE1-206ENST00000447024 PPARGC1BQ86YN6 1023 aaKnown RBP12.18□□□□□ -0.46
SMARCE1-206ENST00000447024 GOLGA6L1Q8N7Z2 621 aa12.18□□□□□ -0.46
SMARCE1-206ENST00000447024 NDFIP2Q9NV92 336 aa12.18□□□□□ -0.46
SMARCE1-206ENST00000447024 KIAA1107Q9UPP5 1409 aa12.18□□□□□ -0.46
SMARCE1-206ENST00000447024 KDM5CP41229 1560 aa12.18□□□□□ -0.46
SMARCE1-206ENST00000447024 KRBA1A5PL33 1030 aa12.17□□□□□ -0.46
SMARCE1-206ENST00000447024 C2CD2LO14523 706 aa12.17□□□□□ -0.46
SMARCE1-206ENST00000447024 BMP4P12644 408 aa12.17□□□□□ -0.46
SMARCE1-206ENST00000447024 SLFNL1Q499Z3 407 aa12.17□□□□□ -0.46
SMARCE1-206ENST00000447024 OXLD1Q5BKU9 147 aa12.17□□□□□ -0.46
SMARCE1-206ENST00000447024 RNF135Q8IUD6 432 aa12.17□□□□□ -0.46
SMARCE1-206ENST00000447024 RRAGCQ9HB90 399 aa12.17□□□□□ -0.46
SMARCE1-206ENST00000447024 CFDP1Q9UEE9 299 aaPredicted RBP12.17□□□□□ -0.46
SMARCE1-206ENST00000447024 MLH3Q9UHC1 1453 aa12.16□□□□□ -0.46
SMARCE1-206ENST00000447024 BNIP3LO60238 219 aa12.16□□□□□ -0.46
SMARCE1-206ENST00000447024 FGFR3P22607 806 aa12.16□□□□□ -0.46
SMARCE1-206ENST00000447024 IRF5Q13568 498 aa12.16□□□□□ -0.46
SMARCE1-206ENST00000447024 CRISPLD1Q9H336 500 aa12.16□□□□□ -0.46
SMARCE1-206ENST00000447024 TIAM1Q13009 1591 aa12.16□□□□□ -0.46
SMARCE1-206ENST00000447024 ABCC1P33527 1531 aa12.16□□□□□ -0.46
SMARCE1-206ENST00000447024 ATP10AO60312 1499 aa12.15□□□□□ -0.46
SMARCE1-206ENST00000447024 COL8A1P27658 744 aa12.15□□□□□ -0.46
SMARCE1-206ENST00000447024 PLA2G4AP47712 749 aa12.15□□□□□ -0.46
SMARCE1-206ENST00000447024 ITSN2Q9NZM3 1697 aa12.14□□□□□ -0.47
SMARCE1-206ENST00000447024 CTBSQ01459 385 aa12.14□□□□□ -0.47
SMARCE1-206ENST00000447024 SLCO4C1Q6ZQN7 724 aa12.14□□□□□ -0.47
SMARCE1-206ENST00000447024 AFAP1Q8N556 730 aa12.14□□□□□ -0.47
SMARCE1-206ENST00000447024 CHIC2Q9UKJ5 165 aa12.14□□□□□ -0.47
SMARCE1-206ENST00000447024 SUPT6HQ7KZ85 1726 aaKnown RBP12.14□□□□□ -0.47
SMARCE1-206ENST00000447024 ARID4BQ4LE39 1312 aaPredicted RBP12.13□□□□□ -0.47
SMARCE1-206ENST00000447024 HOXB4P17483 251 aaPredicted RBP12.13□□□□□ -0.47
SMARCE1-206ENST00000447024 SCNN1DP51172 638 aa12.13□□□□□ -0.47
SMARCE1-206ENST00000447024 GGA1Q9UJY5 639 aa12.13□□□□□ -0.47
SMARCE1-206ENST00000447024 HECW2Q9P2P5 1572 aa12.13□□□□□ -0.47
SMARCE1-206ENST00000447024 C9orf84Q5VXU9 1444 aa12.12□□□□□ -0.47
SMARCE1-206ENST00000447024 YEATS2Q9ULM3 1422 aa12.12□□□□□ -0.47
SMARCE1-206ENST00000447024 TBC1D9Q6ZT07 1266 aa12.12□□□□□ -0.47
SMARCE1-206ENST00000447024 ALYREFQ86V81 257 aaKnown RBP12.12□□□□□ -0.47
SMARCE1-206ENST00000447024 SIRT1Q96EB6 747 aa12.12□□□□□ -0.47
SMARCE1-206ENST00000447024 PRM3Q9NNZ6 103 aa12.12□□□□□ -0.47
SMARCE1-206ENST00000447024 LRRC9Q6ZRR7 1453 aa12.12□□□□□ -0.47
SMARCE1-206ENST00000447024 REREQ9P2R6 1566 aa12.12□□□□□ -0.47
SMARCE1-206ENST00000447024 ADAMTSL3P82987 1691 aa12.12□□□□□ -0.47
SMARCE1-206ENST00000447024 BCORL1Q5H9F3 1711 aa12.11□□□□□ -0.47
SMARCE1-206ENST00000447024 AMPD1P23109 780 aa12.11□□□□□ -0.47
SMARCE1-206ENST00000447024 DNAAF2Q9NVR5 837 aaKnown RBP12.11□□□□□ -0.47
SMARCE1-206ENST00000447024 ARHGEF12Q9NZN5 1544 aa12.11□□□□□ -0.47
SMARCE1-206ENST00000447024 TRAPPC8Q9Y2L5 1435 aa12.11□□□□□ -0.47
SMARCE1-206ENST00000447024 SAMD9LQ8IVG5 1584 aa12.1□□□□□ -0.47
SMARCE1-206ENST00000447024 NCOA2Q15596 1464 aa12.1□□□□□ -0.47
SMARCE1-206ENST00000447024 INHAP05111 366 aa12.1□□□□□ -0.47
SMARCE1-206ENST00000447024 GDF10P55107 478 aa12.1□□□□□ -0.47
SMARCE1-206ENST00000447024 VAC14Q08AM6 782 aa12.1□□□□□ -0.47
SMARCE1-206ENST00000447024 LINC00114Q6XXX2 140 aa12.1□□□□□ -0.47
SMARCE1-206ENST00000447024 ZNF777Q9ULD5 760 aaPredicted RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms