RNA–Protein interactions for RNA: ENST00000439984.7

PCNX1-202, Transcript of pecanex 1, humanhuman

TSL 1 (best) BASIC

Gene PCNX1, Length 6,988 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-202ENST00000439984 EZRP15311 586 aaKnown RBP16.97■□□□□ 0.31
PCNX1-202ENST00000439984 SSBP05455 408 aaKnown RBP eCLIP16.97■□□□□ 0.31
PCNX1-202ENST00000439984 GOLGA1Q92805 767 aa16.97■□□□□ 0.31
PCNX1-202ENST00000439984 ERO1AQ96HE7 468 aa16.97■□□□□ 0.31
PCNX1-202ENST00000439984 HLTFQ14527 1009 aaKnown RBP eCLIP16.97■□□□□ 0.314e-6■■■■□ 21.7
PCNX1-202ENST00000439984 RHOXF2BP0C7M4 288 aa16.97■□□□□ 0.31
PCNX1-202ENST00000439984 RHOXF2Q9BQY4 288 aa16.97■□□□□ 0.31
PCNX1-202ENST00000439984 SART3Q15020 963 aaKnown RBP16.97■□□□□ 0.31
PCNX1-202ENST00000439984 ADGRF5Q8IZF2 1346 aa16.96■□□□□ 0.31
PCNX1-202ENST00000439984 SDSP20132 328 aa16.96■□□□□ 0.31
PCNX1-202ENST00000439984 IMMTQ16891 758 aaKnown RBP16.96■□□□□ 0.31
PCNX1-202ENST00000439984 RABEP2Q9H5N1 569 aa16.96■□□□□ 0.31
PCNX1-202ENST00000439984 SYT1P21579 422 aa16.96■□□□□ 0.31
PCNX1-202ENST00000439984 UBASH3AP57075 661 aa16.96■□□□□ 0.3
PCNX1-202ENST00000439984 CTAGE15A4D2H0 777 aa16.95■□□□□ 0.3
PCNX1-202ENST00000439984 CTAGE8P0CG41 777 aa16.95■□□□□ 0.3
PCNX1-202ENST00000439984 SARNPP82979 210 aaKnown RBP16.95■□□□□ 0.3
PCNX1-202ENST00000439984 CTAGE6Q86UF2 777 aa16.95■□□□□ 0.3
PCNX1-202ENST00000439984 CTAGE4Q8IX94 777 aa16.95■□□□□ 0.3
PCNX1-202ENST00000439984 BANK1Q8NDB2 785 aa16.95■□□□□ 0.3
PCNX1-202ENST00000439984 CDK5RAP3Q96JB5 506 aa16.95■□□□□ 0.3
PCNX1-202ENST00000439984 HYPKQ9NX55 129 aa16.95■□□□□ 0.3
PCNX1-202ENST00000439984 ITSN2Q9NZM3 1697 aa16.95■□□□□ 0.3
PCNX1-202ENST00000439984 ZNF445P59923 1031 aa16.95■□□□□ 0.3
PCNX1-202ENST00000439984 CCT2P78371 535 aaKnown RBP16.95■□□□□ 0.3
PCNX1-202ENST00000439984 SPECC1Q5M775 1068 aa16.95■□□□□ 0.3
PCNX1-202ENST00000439984 NUP133Q8WUM0 1156 aa16.95■□□□□ 0.3
PCNX1-202ENST00000439984 ZNF500O60304 480 aaPredicted RBP16.95■□□□□ 0.3
PCNX1-202ENST00000439984 CCDC178Q5BJE1 867 aa16.95■□□□□ 0.3
PCNX1-202ENST00000439984 JADE2Q9NQC1 790 aa16.95■□□□□ 0.3
PCNX1-202ENST00000439984 KRT32Q14532 448 aa16.95■□□□□ 0.3
PCNX1-202ENST00000439984 UTP14CQ5TAP6 766 aaKnown RBP16.95■□□□□ 0.3
PCNX1-202ENST00000439984 HSF2BPO75031 334 aa16.95■□□□□ 0.3
PCNX1-202ENST00000439984 PAFAH1B1P43034 410 aa16.94■□□□□ 0.3
PCNX1-202ENST00000439984 HDAC1Q13547 482 aaPredicted RBP16.94■□□□□ 0.3
PCNX1-202ENST00000439984 KARSQ15046 597 aaKnown RBP16.94■□□□□ 0.3
PCNX1-202ENST00000439984 ZEB2O60315 1214 aa16.94■□□□□ 0.3
PCNX1-202ENST00000439984 EVCP57679 992 aa16.94■□□□□ 0.3
PCNX1-202ENST00000439984 HDGFL1Q5TGJ6 251 aa16.94■□□□□ 0.3
PCNX1-202ENST00000439984 NEK11Q8NG66 645 aa16.94■□□□□ 0.3
PCNX1-202ENST00000439984 TRIM22Q8IYM9 498 aa16.94■□□□□ 0.3
PCNX1-202ENST00000439984 CNNM3Q8NE01 707 aa16.94■□□□□ 0.3
PCNX1-202ENST00000439984 ABCA5Q8WWZ7 1642 aa16.94■□□□□ 0.3
PCNX1-202ENST00000439984 DHX29Q7Z478 1369 aaKnown RBP16.94■□□□□ 0.3
PCNX1-202ENST00000439984 MIS18AQ9NYP9 233 aa16.94■□□□□ 0.3
PCNX1-202ENST00000439984 SULT6B1Q6IMI4 303 aa16.93■□□□□ 0.3
PCNX1-202ENST00000439984 CABP1Q9NZU7 370 aa16.93■□□□□ 0.3
PCNX1-202ENST00000439984 NSD3Q9BZ95 1437 aa16.93■□□□□ 0.3
PCNX1-202ENST00000439984 RALGAPBQ86X10 1494 aa16.93■□□□□ 0.3
PCNX1-202ENST00000439984 F13A1P00488 732 aa16.93■□□□□ 0.3
PCNX1-202ENST00000439984 MSL1Q68DK7 614 aa16.93■□□□□ 0.3
PCNX1-202ENST00000439984 SEPT11Q9NVA2 429 aaKnown RBP16.93■□□□□ 0.3
PCNX1-202ENST00000439984 MAGI3Q5TCQ9 1506 aa16.93■□□□□ 0.3
PCNX1-202ENST00000439984 RLBP1P12271 317 aa16.93■□□□□ 0.3
PCNX1-202ENST00000439984 GTF2E1P29083 439 aaPredicted RBP16.93■□□□□ 0.3
PCNX1-202ENST00000439984 SAMD9Q5K651 1589 aa16.92■□□□□ 0.3
PCNX1-202ENST00000439984 C16orf71Q8IYS4 520 aaPredicted RBP16.92■□□□□ 0.3
PCNX1-202ENST00000439984 PPP1R9BQ96SB3 815 aa16.92■□□□□ 0.3
PCNX1-202ENST00000439984 KDM2BQ8NHM5 1336 aa16.92■□□□□ 0.3
PCNX1-202ENST00000439984 F6X3S4 739 aa16.92■□□□□ 0.3
PCNX1-202ENST00000439984 ALDH1L2Q3SY69 923 aa16.92■□□□□ 0.3
PCNX1-202ENST00000439984 SYTL4Q96C24 671 aaPredicted RBP16.92■□□□□ 0.3
PCNX1-202ENST00000439984 C8orf76Q96K31 380 aa16.92■□□□□ 0.3
PCNX1-202ENST00000439984 CDK19Q9BWU1 502 aa16.92■□□□□ 0.3
PCNX1-202ENST00000439984 DISP1Q96F81 1524 aa16.92■□□□□ 0.3
PCNX1-202ENST00000439984 POLR3DP05423 398 aaPredicted RBP16.91■□□□□ 0.3
PCNX1-202ENST00000439984 OAS2P29728 719 aaKnown RBP16.91■□□□□ 0.3
PCNX1-202ENST00000439984 CAVIN2O95810 425 aa16.91■□□□□ 0.3
PCNX1-202ENST00000439984 ZHX3Q9H4I2 956 aa16.91■□□□□ 0.3
PCNX1-202ENST00000439984 ZSCAN26Q16670 478 aa16.91■□□□□ 0.3
PCNX1-202ENST00000439984 AMOTL1Q8IY63 956 aa16.91■□□□□ 0.3
PCNX1-202ENST00000439984 YEATS4O95619 227 aa16.91■□□□□ 0.3
PCNX1-202ENST00000439984 CCDC114Q96M63 670 aa16.91■□□□□ 0.3
PCNX1-202ENST00000439984 MYCBPQ99417 103 aaPredicted RBP16.91■□□□□ 0.3
PCNX1-202ENST00000439984 CCDC121Q6ZUS5 278 aa16.9■□□□□ 0.3
PCNX1-202ENST00000439984 VPS37DQ86XT2 251 aa16.9■□□□□ 0.3
PCNX1-202ENST00000439984 PZPP20742 1482 aa16.9■□□□□ 0.3
PCNX1-202ENST00000439984 LMOD1P29536 600 aaPredicted RBP16.9■□□□□ 0.3
PCNX1-202ENST00000439984 MAP2K2P36507 400 aa16.9■□□□□ 0.3
PCNX1-202ENST00000439984 NUTM2GQ5VZR2 741 aa16.9■□□□□ 0.3
PCNX1-202ENST00000439984 PPM1EQ8WY54 764 aa16.9■□□□□ 0.3
PCNX1-202ENST00000439984 BOLA2Q9H3K6 86 aa16.9■□□□□ 0.3
PCNX1-202ENST00000439984 UBE4AQ14139 1066 aa16.9■□□□□ 0.3
PCNX1-202ENST00000439984 ADGRL1O94910 1474 aa16.9■□□□□ 0.3
PCNX1-202ENST00000439984 SYCP1Q15431 976 aa16.9■□□□□ 0.3
PCNX1-202ENST00000439984 LZTFL1Q9NQ48 299 aa16.9■□□□□ 0.3
PCNX1-202ENST00000439984 KRT18P05783 430 aaKnown RBP16.89■□□□□ 0.3
PCNX1-202ENST00000439984 TCEANC2Q96MN5 208 aa16.89■□□□□ 0.3
PCNX1-202ENST00000439984 SYCP2Q9BX26 1530 aa16.89■□□□□ 0.29
PCNX1-202ENST00000439984 PPP2R3AQ06190 1150 aa16.89■□□□□ 0.29
PCNX1-202ENST00000439984 TXNDC2Q86VQ3 553 aa16.89■□□□□ 0.29
PCNX1-202ENST00000439984 LMBRD1Q9NUN5 540 aa16.89■□□□□ 0.29
PCNX1-202ENST00000439984 FSD2A1L4K1 749 aa16.89■□□□□ 0.29
PCNX1-202ENST00000439984 TTC39AQ5SRH9 613 aa16.89■□□□□ 0.29
PCNX1-202ENST00000439984 SLC52A1Q9NWF4 448 aa16.89■□□□□ 0.29
PCNX1-202ENST00000439984 PBRM1Q86U86 1689 aa16.89■□□□□ 0.29
PCNX1-202ENST00000439984 TMEM63CQ9P1W3 806 aa16.89■□□□□ 0.29
PCNX1-202ENST00000439984 DNMT1P26358 1616 aaKnown RBP16.89■□□□□ 0.29
PCNX1-202ENST00000439984 FKBP4Q02790 459 aaKnown RBP eCLIP16.88■□□□□ 0.29
PCNX1-202ENST00000439984 HDXQ7Z353 690 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms