RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 KIF23Q02241 960 aaPredicted RBP16.04■□□□□ 0.16
RTN4-211ENST00000438462 USP50Q70EL3 339 aaPredicted RBP16.04■□□□□ 0.16
RTN4-211ENST00000438462 GLIS2Q9BZE0 524 aaPredicted RBP16.04■□□□□ 0.16
RTN4-211ENST00000438462 SPG7Q9UQ90 795 aa16.04■□□□□ 0.16
RTN4-211ENST00000438462 GJA3Q9Y6H8 435 aa16.04■□□□□ 0.16
RTN4-211ENST00000438462 BRCA2P51587 3418 aa16.03■□□□□ 0.16
RTN4-211ENST00000438462 PDE6BP35913 854 aa16.03■□□□□ 0.16
RTN4-211ENST00000438462 HUNKP57058 714 aa16.03■□□□□ 0.16
RTN4-211ENST00000438462 FKBP4Q02790 459 aaKnown RBP eCLIP16.03■□□□□ 0.16
RTN4-211ENST00000438462 CHRDL2Q6WN34 429 aa16.03■□□□□ 0.16
RTN4-211ENST00000438462 PDZRN3Q9UPQ7 1066 aa16.03■□□□□ 0.16
RTN4-211ENST00000438462 RRS1Q15050 365 aaKnown RBP16.02■□□□□ 0.16
RTN4-211ENST00000438462 CCDC93Q567U6 631 aa16.02■□□□□ 0.16
RTN4-211ENST00000438462 CNKSR1Q969H4 720 aa16.02■□□□□ 0.16
RTN4-211ENST00000438462 HTTP42858 3142 aa16.01■□□□□ 0.15
RTN4-211ENST00000438462 PHKG2P15735 406 aa16.01■□□□□ 0.15
RTN4-211ENST00000438462 HDGFL2Q7Z4V5 671 aaPredicted RBP16.01■□□□□ 0.15
RTN4-211ENST00000438462 CCDC24Q8N4L8 307 aa16.01■□□□□ 0.15
RTN4-211ENST00000438462 BCL2L12Q9HB09 334 aa16.01■□□□□ 0.15
RTN4-211ENST00000438462 A0A1W2PP64 1363 aa16■□□□□ 0.15
RTN4-211ENST00000438462 SOS1Q07889 1333 aaPredicted RBP16■□□□□ 0.15
RTN4-211ENST00000438462 H0YGN5 161 aa16■□□□□ 0.15
RTN4-211ENST00000438462 INTS5Q6P9B9 1019 aaKnown RBP16■□□□□ 0.15
RTN4-211ENST00000438462 COG3Q96JB2 828 aa16■□□□□ 0.15
RTN4-211ENST00000438462 BRIP1Q9BX63 1249 aa16■□□□□ 0.15
RTN4-211ENST00000438462 RBM27Q9P2N5 1060 aaKnown RBP16■□□□□ 0.15
RTN4-211ENST00000438462 NARFQ9UHQ1 456 aa16■□□□□ 0.15
RTN4-211ENST00000438462 COL4A5P29400 1685 aa15.99■□□□□ 0.15
RTN4-211ENST00000438462 RANBP2P49792 3224 aaKnown RBP15.99■□□□□ 0.15
RTN4-211ENST00000438462 PTCD1O75127 700 aaKnown RBP15.99■□□□□ 0.15
RTN4-211ENST00000438462 RGMBQ6NW40 437 aa15.99■□□□□ 0.15
RTN4-211ENST00000438462 ZNF296Q8WUU4 475 aaPredicted RBP15.99■□□□□ 0.15
RTN4-211ENST00000438462 PRDM6Q9NQX0 595 aa15.99■□□□□ 0.15
RTN4-211ENST00000438462 COL15A1P39059 1388 aa15.99■□□□□ 0.15
RTN4-211ENST00000438462 IARSP41252 1262 aaKnown RBP15.98■□□□□ 0.15
RTN4-211ENST00000438462 NCAPD2Q15021 1401 aa15.98■□□□□ 0.15
RTN4-211ENST00000438462 STYK1Q6J9G0 422 aa15.98■□□□□ 0.15
RTN4-211ENST00000438462 IFNL2Q8IZJ0 200 aa15.98■□□□□ 0.15
RTN4-211ENST00000438462 ANKRD26Q9UPS8 1709 aa15.98■□□□□ 0.15
RTN4-211ENST00000438462 CENPFP49454 3210 aa15.97■□□□□ 0.15
RTN4-211ENST00000438462 LAMB4A4D0S4 1761 aa15.96■□□□□ 0.15
RTN4-211ENST00000438462 HSP90AB2PQ58FF8 381 aa15.96■□□□□ 0.15
RTN4-211ENST00000438462 TMC1Q8TDI8 760 aa15.96■□□□□ 0.15
RTN4-211ENST00000438462 C7orf43Q8WVR3 580 aa15.96■□□□□ 0.15
RTN4-211ENST00000438462 CSRNP1Q96S65 589 aa15.96■□□□□ 0.15
RTN4-211ENST00000438462 EIF6P56537 245 aaKnown RBP15.95■□□□□ 0.14
RTN4-211ENST00000438462 PRR5LQ6MZQ0 368 aa15.95■□□□□ 0.14
RTN4-211ENST00000438462 OLFM4Q6UX06 510 aa15.95■□□□□ 0.14
RTN4-211ENST00000438462 CCDC102AQ96A19 550 aa15.95■□□□□ 0.14
RTN4-211ENST00000438462 CEP290O15078 2479 aa15.95■□□□□ 0.14
RTN4-211ENST00000438462 SRGNP10124 158 aa15.94■□□□□ 0.14
RTN4-211ENST00000438462 EN2P19622 333 aaPredicted RBP15.94■□□□□ 0.14
RTN4-211ENST00000438462 SCN7AQ01118 1682 aa15.94■□□□□ 0.14
RTN4-211ENST00000438462 COL9A1P20849 921 aa15.93■□□□□ 0.14
RTN4-211ENST00000438462 ZNF157P51786 506 aaPredicted RBP15.93■□□□□ 0.14
RTN4-211ENST00000438462 JDP2Q8WYK2 163 aa15.93■□□□□ 0.14
RTN4-211ENST00000438462 MASTLQ96GX5 879 aa15.93■□□□□ 0.14
RTN4-211ENST00000438462 ADARB2Q9NS39 739 aaKnown RBP15.93■□□□□ 0.14
RTN4-211ENST00000438462 FLT4P35916 1363 aa15.92■□□□□ 0.14
RTN4-211ENST00000438462 ERVV-2B6SEH9 535 aa15.92■□□□□ 0.14
RTN4-211ENST00000438462 INTS3Q68E01 1043 aaKnown RBP15.92■□□□□ 0.14
RTN4-211ENST00000438462 SLC12A5Q9H2X9 1139 aa15.92■□□□□ 0.14
RTN4-211ENST00000438462 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.92■□□□□ 0.14
RTN4-211ENST00000438462 VCANP13611 3396 aa15.91■□□□□ 0.14
RTN4-211ENST00000438462 SPTBN5Q9NRC6 3674 aaKnown RBP15.91■□□□□ 0.14
RTN4-211ENST00000438462 SLC10A3P09131 477 aa15.91■□□□□ 0.14
RTN4-211ENST00000438462 TBC1D8O95759 1140 aa15.9■□□□□ 0.14
RTN4-211ENST00000438462 TONSLQ96HA7 1378 aa15.89■□□□□ 0.13
RTN4-211ENST00000438462 TBC1D9BQ66K14 1250 aa15.89■□□□□ 0.13
RTN4-211ENST00000438462 RTKN2Q8IZC4 609 aa15.89■□□□□ 0.13
RTN4-211ENST00000438462 TERF2IPQ9NYB0 399 aa15.89■□□□□ 0.13
RTN4-211ENST00000438462 GPRC5DQ9NZD1 345 aa15.89■□□□□ 0.13
RTN4-211ENST00000438462 KIAA0100Q14667 2235 aaKnown RBP15.88■□□□□ 0.13
RTN4-211ENST00000438462 SOX1O00570 391 aaPredicted RBP15.88■□□□□ 0.13
RTN4-211ENST00000438462 DLK2Q6UY11 383 aa15.88■□□□□ 0.13
RTN4-211ENST00000438462 CDC37L1Q7L3B6 337 aa15.88■□□□□ 0.13
RTN4-211ENST00000438462 LRCH3Q96II8 777 aa15.88■□□□□ 0.13
RTN4-211ENST00000438462 PGAP2Q9UHJ9 254 aa15.88■□□□□ 0.13
RTN4-211ENST00000438462 GPR25O00155 361 aa15.87■□□□□ 0.13
RTN4-211ENST00000438462 PLA2G5P39877 138 aa15.87■□□□□ 0.13
RTN4-211ENST00000438462 DNAJC10Q8IXB1 793 aa15.87■□□□□ 0.13
RTN4-211ENST00000438462 CNBD1Q8NA66 436 aa15.87■□□□□ 0.13
RTN4-211ENST00000438462 GBA2Q9HCG7 927 aaPredicted RBP15.87■□□□□ 0.13
RTN4-211ENST00000438462 ZBTB1Q9Y2K1 713 aa15.87■□□□□ 0.13
RTN4-211ENST00000438462 LAMA3Q16787 3333 aa15.86■□□□□ 0.13
RTN4-211ENST00000438462 SNED1Q8TER0 1413 aa15.86■□□□□ 0.13
RTN4-211ENST00000438462 NPHP1O15259 732 aa15.86■□□□□ 0.13
RTN4-211ENST00000438462 CABP4P57796 275 aa15.86■□□□□ 0.13
RTN4-211ENST00000438462 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.86■□□□□ 0.13
RTN4-211ENST00000438462 RAPGEFL1Q9UHV5 662 aa15.86■□□□□ 0.13
RTN4-211ENST00000438462 REM2Q8IYK8 340 aaPredicted RBP15.85■□□□□ 0.13
RTN4-211ENST00000438462 ST5P78524 1137 aa15.84■□□□□ 0.13
RTN4-211ENST00000438462 USP48Q86UV5 1035 aa15.84■□□□□ 0.13
RTN4-211ENST00000438462 C2orf69Q8N8R5 385 aa15.84■□□□□ 0.13
RTN4-211ENST00000438462 PRO3102Q9H379 93 aa15.84■□□□□ 0.13
RTN4-211ENST00000438462 RASAL3Q86YV0 1011 aa15.83■□□□□ 0.12
RTN4-211ENST00000438462 STXBP5LQ9Y2K9 1186 aa15.83■□□□□ 0.12
RTN4-211ENST00000438462 ERBB4Q15303 1308 aa15.83■□□□□ 0.12
RTN4-211ENST00000438462 CYP19A1P11511 503 aaPredicted RBP15.82■□□□□ 0.12
RTN4-211ENST00000438462 HIRAP54198 1017 aaPredicted RBP15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms