RNA–Protein interactions for RNA: ENST00000438326.2

PMS2P3-206, Transcript of PMS1 homolog 2, mismatch repair system component pseudogene 3, humanhuman

TSL 5

Gene PMS2P3, Length 229 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P3-206ENST00000438326 CLEC4GQ6UXB4 293 aa7.09□□□□□ -1.27
PMS2P3-206ENST00000438326 BICDL1Q6ZP65 573 aa7.09□□□□□ -1.27
PMS2P3-206ENST00000438326 NPM2Q86SE8 214 aaKnown RBP7.09□□□□□ -1.27
PMS2P3-206ENST00000438326 CNKSR1Q969H4 720 aa7.09□□□□□ -1.27
PMS2P3-206ENST00000438326 SETDB2Q96T68 719 aa7.09□□□□□ -1.27
PMS2P3-206ENST00000438326 TAOK3Q9H2K8 898 aa7.09□□□□□ -1.27
PMS2P3-206ENST00000438326 ZNF652Q9Y2D9 606 aa7.09□□□□□ -1.27
PMS2P3-206ENST00000438326 RIC1Q4ADV7 1423 aa7.09□□□□□ -1.28
PMS2P3-206ENST00000438326 ANKRD36CQ5JPF3 1778 aa7.08□□□□□ -1.28
PMS2P3-206ENST00000438326 POTECB2RU33 542 aa7.08□□□□□ -1.28
PMS2P3-206ENST00000438326 C21orf2O43822 256 aa7.08□□□□□ -1.28
PMS2P3-206ENST00000438326 ERFEQ4G0M1 354 aa7.08□□□□□ -1.28
PMS2P3-206ENST00000438326 PRPF40BQ6NWY9 871 aaKnown RBP7.08□□□□□ -1.28
PMS2P3-206ENST00000438326 DZIP3Q86Y13 1208 aaKnown RBP7.08□□□□□ -1.28
PMS2P3-206ENST00000438326 ZNF622Q969S3 477 aaKnown RBP eCLIP7.08□□□□□ -1.28
PMS2P3-206ENST00000438326 MASTLQ96GX5 879 aa7.08□□□□□ -1.28
PMS2P3-206ENST00000438326 PHACTR3Q96KR7 559 aa7.08□□□□□ -1.28
PMS2P3-206ENST00000438326 TBC1D2BQ9UPU7 963 aa7.08□□□□□ -1.28
PMS2P3-206ENST00000438326 ZNF330Q9Y3S2 320 aaPredicted RBP7.08□□□□□ -1.28
PMS2P3-206ENST00000438326 IBTKQ9P2D0 1353 aaPredicted RBP7.08□□□□□ -1.28
PMS2P3-206ENST00000438326 KLRG2A4D1S0 409 aaPredicted RBP7.07□□□□□ -1.28
PMS2P3-206ENST00000438326 NPHP1O15259 732 aa7.07□□□□□ -1.28
PMS2P3-206ENST00000438326 HTATSF1O43719 755 aaKnown RBP7.07□□□□□ -1.28
PMS2P3-206ENST00000438326 A1BGP04217 495 aa7.07□□□□□ -1.28
PMS2P3-206ENST00000438326 SNRPA1P09661 255 aaKnown RBP7.07□□□□□ -1.28
PMS2P3-206ENST00000438326 L3MBTL3Q96JM7 780 aaPredicted RBP7.07□□□□□ -1.28
PMS2P3-206ENST00000438326 NUDCQ9Y266 331 aa7.07□□□□□ -1.28
PMS2P3-206ENST00000438326 THSD7BQ9C0I4 1608 aa7.07□□□□□ -1.28
PMS2P3-206ENST00000438326 SNED1Q8TER0 1413 aa7.07□□□□□ -1.28
PMS2P3-206ENST00000438326 IQCA1LA6NCM1 817 aa7.06□□□□□ -1.28
PMS2P3-206ENST00000438326 KCNQ3O43525 872 aa7.06□□□□□ -1.28
PMS2P3-206ENST00000438326 NPR1P16066 1061 aa7.06□□□□□ -1.28
PMS2P3-206ENST00000438326 CCDC93Q567U6 631 aa7.06□□□□□ -1.28
PMS2P3-206ENST00000438326 COL13A1Q5TAT6 717 aaPredicted RBP7.06□□□□□ -1.28
PMS2P3-206ENST00000438326 CHADLQ6NUI6 762 aa7.06□□□□□ -1.28
PMS2P3-206ENST00000438326 NBPF5PQ86XG9 351 aaPredicted RBP7.06□□□□□ -1.28
PMS2P3-206ENST00000438326 C7orf43Q8WVR3 580 aa7.06□□□□□ -1.28
PMS2P3-206ENST00000438326 RTF1Q92541 710 aaKnown RBP7.06□□□□□ -1.28
PMS2P3-206ENST00000438326 CREBZFQ9NS37 354 aa7.06□□□□□ -1.28
PMS2P3-206ENST00000438326 USP16Q9Y5T5 823 aa7.06□□□□□ -1.28
PMS2P3-206ENST00000438326 PCNTO95613 3336 aa7.06□□□□□ -1.28
PMS2P3-206ENST00000438326 LAMB2P55268 1798 aa7.05□□□□□ -1.28
PMS2P3-206ENST00000438326 TRPM7Q96QT4 1865 aa7.05□□□□□ -1.28
PMS2P3-206ENST00000438326 NBPF26B4DH59 902 aa7.05□□□□□ -1.28
PMS2P3-206ENST00000438326 HSPA1AP0DMV8 641 aaKnown RBP7.05□□□□□ -1.28
PMS2P3-206ENST00000438326 HSPA1BP0DMV9 641 aaKnown RBP7.05□□□□□ -1.28
PMS2P3-206ENST00000438326 U2AF1L5P0DN76 240 aaPredicted RBP7.05□□□□□ -1.28
PMS2P3-206ENST00000438326 PPP2R1AP30153 589 aa7.05□□□□□ -1.28
PMS2P3-206ENST00000438326 U2AF1Q01081 240 aaKnown RBP eCLIP7.05□□□□□ -1.28
PMS2P3-206ENST00000438326 FKBP4Q02790 459 aaKnown RBP eCLIP7.05□□□□□ -1.28
PMS2P3-206ENST00000438326 NBPF10Q6P3W6 841 aaKnown RBP7.05□□□□□ -1.28
PMS2P3-206ENST00000438326 MCM10Q7L590 875 aa7.05□□□□□ -1.28
PMS2P3-206ENST00000438326 CCDC24Q8N4L8 307 aa7.05□□□□□ -1.28
PMS2P3-206ENST00000438326 NBPF15Q8N660 670 aa7.05□□□□□ -1.28
PMS2P3-206ENST00000438326 PASKQ96RG2 1323 aa7.04□□□□□ -1.28
PMS2P3-206ENST00000438326 PRAMEF22A3QJZ6 481 aa7.04□□□□□ -1.28
PMS2P3-206ENST00000438326 DDNO94850 711 aaPredicted RBP7.04□□□□□ -1.28
PMS2P3-206ENST00000438326 CRY2Q49AN0 593 aa7.04□□□□□ -1.28
PMS2P3-206ENST00000438326 TPTE2Q6XPS3 522 aa7.04□□□□□ -1.28
PMS2P3-206ENST00000438326 LDHDQ86WU2 507 aa7.04□□□□□ -1.28
PMS2P3-206ENST00000438326 RTKN2Q8IZC4 609 aa7.04□□□□□ -1.28
PMS2P3-206ENST00000438326 TNS4Q8IZW8 715 aa7.04□□□□□ -1.28
PMS2P3-206ENST00000438326 PNISRQ8TF01 805 aaKnown RBP7.04□□□□□ -1.28
PMS2P3-206ENST00000438326 ZNF219Q9P2Y4 722 aaPredicted RBP7.04□□□□□ -1.28
PMS2P3-206ENST00000438326 NIP7Q9Y221 180 aaKnown RBP eCLIP7.04□□□□□ -1.28
PMS2P3-206ENST00000438326 CNTNAP1P78357 1384 aa7.04□□□□□ -1.28
PMS2P3-206ENST00000438326 ABCC12Q96J65 1359 aa7.04□□□□□ -1.28
PMS2P3-206ENST00000438326 LTBP1Q14766 1721 aa7.04□□□□□ -1.28
PMS2P3-206ENST00000438326 ERVV-1B6SEH8 477 aa7.03□□□□□ -1.28
PMS2P3-206ENST00000438326 PIP4K2AP48426 406 aaPredicted RBP7.03□□□□□ -1.28
PMS2P3-206ENST00000438326 TAF7Q15545 349 aaPredicted RBP7.03□□□□□ -1.28
PMS2P3-206ENST00000438326 CC2D2BQ6DHV5 1058 aa7.03□□□□□ -1.28
PMS2P3-206ENST00000438326 PSMD1Q99460 953 aa7.03□□□□□ -1.28
PMS2P3-206ENST00000438326 NYXQ9GZU5 481 aa7.03□□□□□ -1.28
PMS2P3-206ENST00000438326 TAF1DQ9H5J8 278 aaPredicted RBP7.03□□□□□ -1.28
PMS2P3-206ENST00000438326 LRRC37AA6NMS7 1700 aa7.03□□□□□ -1.28
PMS2P3-206ENST00000438326 COL4A5P29400 1685 aa7.03□□□□□ -1.28
PMS2P3-206ENST00000438326 ERBB4Q15303 1308 aa7.02□□□□□ -1.28
PMS2P3-206ENST00000438326 MAP3K15Q6ZN16 1313 aa7.02□□□□□ -1.28
PMS2P3-206ENST00000438326 ZNF541Q9H0D2 1346 aa7.02□□□□□ -1.28
PMS2P3-206ENST00000438326 FZD9O00144 591 aa7.02□□□□□ -1.29
PMS2P3-206ENST00000438326 NEFMP07197 916 aa7.02□□□□□ -1.29
PMS2P3-206ENST00000438326 POTEIP0CG38 1075 aa7.02□□□□□ -1.29
PMS2P3-206ENST00000438326 POTEJP0CG39 1038 aa7.02□□□□□ -1.29
PMS2P3-206ENST00000438326 ALDH1B1P30837 517 aa7.02□□□□□ -1.29
PMS2P3-206ENST00000438326 IARSP41252 1262 aaKnown RBP7.02□□□□□ -1.29
PMS2P3-206ENST00000438326 GRIPAP1Q4V328 841 aa7.02□□□□□ -1.29
PMS2P3-206ENST00000438326 HACL1Q9UJ83 578 aa7.02□□□□□ -1.29
PMS2P3-206ENST00000438326 DDX60Q8IY21 1712 aaKnown RBP7.01□□□□□ -1.29
PMS2P3-206ENST00000438326 ITGBL1O95965 494 aaPredicted RBP7.01□□□□□ -1.29
PMS2P3-206ENST00000438326 HOXA10P31260 410 aaPredicted RBP7.01□□□□□ -1.29
PMS2P3-206ENST00000438326 EPHX2P34913 555 aa7.01□□□□□ -1.29
PMS2P3-206ENST00000438326 CNGB1Q14028 1251 aaPredicted RBP7.01□□□□□ -1.29
PMS2P3-206ENST00000438326 DCTN1Q14203 1278 aa7.01□□□□□ -1.29
PMS2P3-206ENST00000438326 HLFQ16534 295 aa7.01□□□□□ -1.29
PMS2P3-206ENST00000438326 KIF6Q6ZMV9 814 aa7.01□□□□□ -1.29
PMS2P3-206ENST00000438326 PNMA8AQ86V59 439 aaPredicted RBP7.01□□□□□ -1.29
PMS2P3-206ENST00000438326 GPC2Q8N158 579 aa7.01□□□□□ -1.29
PMS2P3-206ENST00000438326 ZNF277Q9NRM2 450 aaPredicted RBP7.01□□□□□ -1.29
PMS2P3-206ENST00000438326 RNF123Q5XPI4 1314 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms