RNA–Protein interactions for RNA: ENST00000437932.5

PDLIM5-206, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5 BASIC

Gene PDLIM5, Length 5,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-206ENST00000437932 CCDC144CPQ8IYA2 1237 aa13.81□□□□□ -0.2
PDLIM5-206ENST00000437932 XAGE3Q8WTP9 111 aa13.81□□□□□ -0.2
PDLIM5-206ENST00000437932 TTC12Q9H892 705 aaPredicted RBP13.81□□□□□ -0.2
PDLIM5-206ENST00000437932 LRRC7Q96NW7 1537 aa13.81□□□□□ -0.2
PDLIM5-206ENST00000437932 A0A087WZG4 1122 aa13.81□□□□□ -0.2
PDLIM5-206ENST00000437932 FAM227BQ96M60 508 aa13.81□□□□□ -0.2
PDLIM5-206ENST00000437932 CNNM1Q9NRU3 951 aa13.81□□□□□ -0.2
PDLIM5-206ENST00000437932 HOMER1Q86YM7 354 aa13.81□□□□□ -0.2
PDLIM5-206ENST00000437932 IQSEC2Q5JU85 1478 aa13.81□□□□□ -0.2
PDLIM5-206ENST00000437932 EVI5LQ96CN4 794 aa13.81□□□□□ -0.2
PDLIM5-206ENST00000437932 NBPF6Q5VWK0 638 aa13.8□□□□□ -0.2
PDLIM5-206ENST00000437932 PDILTQ8N807 584 aa13.8□□□□□ -0.2
PDLIM5-206ENST00000437932 IL17REQ8NFR9 667 aa13.8□□□□□ -0.2
PDLIM5-206ENST00000437932 NBPF4Q96M43 638 aa13.8□□□□□ -0.2
PDLIM5-206ENST00000437932 NSFL1CQ9UNZ2 370 aaKnown RBP13.8□□□□□ -0.2
PDLIM5-206ENST00000437932 ROBO2Q9HCK4 1378 aa13.8□□□□□ -0.2
PDLIM5-206ENST00000437932 TRIM29Q14134 588 aa13.8□□□□□ -0.2
PDLIM5-206ENST00000437932 COPS6Q7L5N1 327 aa13.8□□□□□ -0.2
PDLIM5-206ENST00000437932 KRT28Q7Z3Y7 464 aa13.8□□□□□ -0.2
PDLIM5-206ENST00000437932 KCNH5Q8NCM2 988 aa13.8□□□□□ -0.2
PDLIM5-206ENST00000437932 SNX14Q9Y5W7 946 aa13.8□□□□□ -0.2
PDLIM5-206ENST00000437932 GTF2E1P29083 439 aaPredicted RBP13.8□□□□□ -0.2
PDLIM5-206ENST00000437932 NFATC2IPQ8NCF5 419 aa13.8□□□□□ -0.2
PDLIM5-206ENST00000437932 ZSCAN31Q96LW9 406 aaPredicted RBP13.8□□□□□ -0.2
PDLIM5-206ENST00000437932 TMEM63CQ9P1W3 806 aa13.8□□□□□ -0.2
PDLIM5-206ENST00000437932 MAP3K11Q16584 847 aa13.8□□□□□ -0.2
PDLIM5-206ENST00000437932 PHF23Q9BUL5 403 aaPredicted RBP13.8□□□□□ -0.2
PDLIM5-206ENST00000437932 TTC21AQ8NDW8 1320 aa13.79□□□□□ -0.2
PDLIM5-206ENST00000437932 KINO60870 393 aaKnown RBP13.79□□□□□ -0.2
PDLIM5-206ENST00000437932 FILIP1Q7Z7B0 1213 aa13.79□□□□□ -0.2
PDLIM5-206ENST00000437932 EDC3Q96F86 508 aaKnown RBP13.79□□□□□ -0.2
PDLIM5-206ENST00000437932 CFAP74Q9C0B2 1584 aa13.79□□□□□ -0.2
PDLIM5-206ENST00000437932 STK38Q15208 465 aa13.79□□□□□ -0.2
PDLIM5-206ENST00000437932 PIBF1Q8WXW3 757 aa13.79□□□□□ -0.2
PDLIM5-206ENST00000437932 CCDC158Q5M9N0 1113 aa13.79□□□□□ -0.2
PDLIM5-206ENST00000437932 TMX1Q9H3N1 280 aa13.79□□□□□ -0.2
PDLIM5-206ENST00000437932 ANKRD1Q15327 319 aa13.78□□□□□ -0.2
PDLIM5-206ENST00000437932 F13A1P00488 732 aa13.78□□□□□ -0.2
PDLIM5-206ENST00000437932 ZNF853P0CG23 659 aa13.78□□□□□ -0.2
PDLIM5-206ENST00000437932 CDK11BP21127 795 aaKnown RBP13.78□□□□□ -0.2
PDLIM5-206ENST00000437932 LARP1Q6PKG0 1096 aaKnown RBP13.78□□□□□ -0.2
PDLIM5-206ENST00000437932 FAM177A1Q8N128 213 aaPredicted RBP13.78□□□□□ -0.2
PDLIM5-206ENST00000437932 KIF6Q6ZMV9 814 aa13.78□□□□□ -0.2
PDLIM5-206ENST00000437932 HYPKQ9NX55 129 aa13.78□□□□□ -0.2
PDLIM5-206ENST00000437932 PDCP20941 246 aa13.78□□□□□ -0.2
PDLIM5-206ENST00000437932 TFCP2Q12800 502 aa13.78□□□□□ -0.2
PDLIM5-206ENST00000437932 TTLL5Q6EMB2 1281 aa13.78□□□□□ -0.2
PDLIM5-206ENST00000437932 ZNF771Q7L3S4 317 aaPredicted RBP13.78□□□□□ -0.2
PDLIM5-206ENST00000437932 MLH3Q9UHC1 1453 aa13.78□□□□□ -0.2
PDLIM5-206ENST00000437932 GPTP24298 496 aa13.77□□□□□ -0.2
PDLIM5-206ENST00000437932 CBX1P83916 185 aa13.77□□□□□ -0.2
PDLIM5-206ENST00000437932 CCDC57Q2TAC2 916 aa13.77□□□□□ -0.2
PDLIM5-206ENST00000437932 CCDC82Q8N4S0 544 aa13.77□□□□□ -0.2
PDLIM5-206ENST00000437932 ORAI2Q96SN7 254 aa13.77□□□□□ -0.2
PDLIM5-206ENST00000437932 INO80Q9ULG1 1556 aaPredicted RBP13.77□□□□□ -0.21
PDLIM5-206ENST00000437932 MYOM1P52179 1685 aa13.77□□□□□ -0.21
PDLIM5-206ENST00000437932 PPP6R1Q9UPN7 881 aa13.77□□□□□ -0.21
PDLIM5-206ENST00000437932 ALKQ9UM73 1620 aa13.77□□□□□ -0.21
PDLIM5-206ENST00000437932 POLR3DP05423 398 aaPredicted RBP13.77□□□□□ -0.21
PDLIM5-206ENST00000437932 SBNO1A3KN83 1393 aa13.76□□□□□ -0.21
PDLIM5-206ENST00000437932 BIN1O00499 593 aa13.76□□□□□ -0.21
PDLIM5-206ENST00000437932 AMOTQ4VCS5 1084 aa13.76□□□□□ -0.21
PDLIM5-206ENST00000437932 GRM8O00222 908 aa13.76□□□□□ -0.21
PDLIM5-206ENST00000437932 PTH1RQ03431 593 aa13.76□□□□□ -0.21
PDLIM5-206ENST00000437932 CREB3L3Q68CJ9 461 aa13.76□□□□□ -0.21
PDLIM5-206ENST00000437932 Q6ZUG5 572 aa13.76□□□□□ -0.21
PDLIM5-206ENST00000437932 C16orf45Q96MC5 204 aaPredicted RBP13.76□□□□□ -0.21
PDLIM5-206ENST00000437932 IDH1O75874 414 aaKnown RBP13.76□□□□□ -0.21
PDLIM5-206ENST00000437932 SYT1P21579 422 aa13.76□□□□□ -0.21
PDLIM5-206ENST00000437932 USP44Q9H0E7 712 aa13.76□□□□□ -0.21
PDLIM5-206ENST00000437932 IFIT1P09914 478 aaKnown RBP13.76□□□□□ -0.21
PDLIM5-206ENST00000437932 PROSER3Q2NL68 480 aa13.76□□□□□ -0.21
PDLIM5-206ENST00000437932 TRMT1Q9NXH9 659 aaKnown RBP13.76□□□□□ -0.21
PDLIM5-206ENST00000437932 RNMTO43148 476 aaKnown RBP13.75□□□□□ -0.21
PDLIM5-206ENST00000437932 AKAP4Q5JQC9 854 aa13.75□□□□□ -0.21
PDLIM5-206ENST00000437932 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.75□□□□□ -0.212e-8■■■■□ 25.8
PDLIM5-206ENST00000437932 UBE2HP62256 183 aa13.75□□□□□ -0.21
PDLIM5-206ENST00000437932 VPS37DQ86XT2 251 aa13.75□□□□□ -0.21
PDLIM5-206ENST00000437932 BRF1Q92994 677 aa13.75□□□□□ -0.21
PDLIM5-206ENST00000437932 SUCLG2Q96I99 432 aa13.75□□□□□ -0.21
PDLIM5-206ENST00000437932 KIF2CQ99661 725 aa13.75□□□□□ -0.21
PDLIM5-206ENST00000437932 SPDYE4A6NLX3 237 aa13.75□□□□□ -0.21
PDLIM5-206ENST00000437932 AKAP17AQ02040 695 aaKnown RBP13.75□□□□□ -0.21
PDLIM5-206ENST00000437932 ZC3H13Q5T200 1668 aaKnown RBP13.75□□□□□ -0.21
PDLIM5-206ENST00000437932 KSR2Q6VAB6 950 aa13.75□□□□□ -0.21
PDLIM5-206ENST00000437932 NUP133Q8WUM0 1156 aa13.75□□□□□ -0.21
PDLIM5-206ENST00000437932 FSD2A1L4K1 749 aa13.75□□□□□ -0.21
PDLIM5-206ENST00000437932 ANO6Q4KMQ2 910 aa13.75□□□□□ -0.21
PDLIM5-206ENST00000437932 RRP9O43818 475 aaKnown RBP13.74□□□□□ -0.21
PDLIM5-206ENST00000437932 PRDM11Q9NQV5 511 aa13.74□□□□□ -0.21
PDLIM5-206ENST00000437932 SLC4A8Q2Y0W8 1093 aa13.74□□□□□ -0.21
PDLIM5-206ENST00000437932 ZBTB9Q96C00 473 aa13.74□□□□□ -0.21
PDLIM5-206ENST00000437932 KIDINS220Q9ULH0 1771 aa13.74□□□□□ -0.21
PDLIM5-206ENST00000437932 ABCA9Q8IUA7 1624 aa13.74□□□□□ -0.21
PDLIM5-206ENST00000437932 NEO1Q92859 1461 aa13.74□□□□□ -0.21
PDLIM5-206ENST00000437932 ERBB4Q15303 1308 aa13.74□□□□□ -0.21
PDLIM5-206ENST00000437932 ZNF396Q96N95 335 aaPredicted RBP13.74□□□□□ -0.21
PDLIM5-206ENST00000437932 NEK1Q96PY6 1258 aa13.74□□□□□ -0.21
PDLIM5-206ENST00000437932 RUFY3Q7L099 469 aa13.73□□□□□ -0.21
PDLIM5-206ENST00000437932 SH2B1Q9NRF2 756 aaPredicted RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms